RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 SPACA3Q8IXA5 215 aa7□□□□□ -1.29
GYPB-206ENST00000506516 SYTL1Q8IYJ3 562 aa7□□□□□ -1.29
GYPB-206ENST00000506516 GPR135Q8IZ08 494 aa7□□□□□ -1.29
GYPB-206ENST00000506516 CACNA2D3Q8IZS8 1091 aa7□□□□□ -1.29
GYPB-206ENST00000506516 NLGN4XQ8N0W4 816 aa7□□□□□ -1.29
GYPB-206ENST00000506516 IL22RA1Q8N6P7 574 aa7□□□□□ -1.29
GYPB-206ENST00000506516 C19orf47Q8N9M1 422 aaKnown RBP7□□□□□ -1.29
GYPB-206ENST00000506516 EIF1ADQ8N9N8 165 aaKnown RBP7□□□□□ -1.29
GYPB-206ENST00000506516 ZSCAN1Q8NBB4 408 aa7□□□□□ -1.29
GYPB-206ENST00000506516 NLGN4YQ8NFZ3 816 aaPredicted RBP7□□□□□ -1.29
GYPB-206ENST00000506516 ZNF501Q96CX3 271 aaPredicted RBP7□□□□□ -1.29
GYPB-206ENST00000506516 PPM1MQ96MI6 270 aa7□□□□□ -1.29
GYPB-206ENST00000506516 CCNL2Q96S94 520 aaPredicted RBP7□□□□□ -1.29
GYPB-206ENST00000506516 PKP4Q99569 1192 aa7□□□□□ -1.29
GYPB-206ENST00000506516 OLFM1Q99784 485 aa7□□□□□ -1.29
GYPB-206ENST00000506516 EFHD1Q9BUP0 239 aa7□□□□□ -1.29
GYPB-206ENST00000506516 ULBP3Q9BZM4 244 aa7□□□□□ -1.29
GYPB-206ENST00000506516 TWSG1Q9GZX9 223 aa7□□□□□ -1.29
GYPB-206ENST00000506516 CHRNA10Q9GZZ6 450 aa7□□□□□ -1.29
GYPB-206ENST00000506516 KLHL25Q9H0H3 589 aa7□□□□□ -1.29
GYPB-206ENST00000506516 CDC42EP4Q9H3Q1 356 aaKnown RBP7□□□□□ -1.29
GYPB-206ENST00000506516 SMYD2Q9NRG4 433 aa7□□□□□ -1.29
GYPB-206ENST00000506516 NINJ2Q9NZG7 142 aa7□□□□□ -1.29
GYPB-206ENST00000506516 PILRAQ9UKJ1 303 aa7□□□□□ -1.29
GYPB-206ENST00000506516 NFU1Q9UMS0 254 aa7□□□□□ -1.29
GYPB-206ENST00000506516 MTO1Q9Y2Z2 717 aaKnown RBP7□□□□□ -1.29
GYPB-206ENST00000506516 TMEM184BQ9Y519 407 aaPredicted RBP7□□□□□ -1.29
GYPB-206ENST00000506516 IKBKGQ9Y6K9 419 aa7□□□□□ -1.29
GYPB-206ENST00000506516 A0A087WUV0 522 aaPredicted RBP6.99□□□□□ -1.29
GYPB-206ENST00000506516 TMEM150CB9EJG8 249 aa6.99□□□□□ -1.29
GYPB-206ENST00000506516 E7EQ34 232 aa6.99□□□□□ -1.29
GYPB-206ENST00000506516 PRICKLE3O43900 615 aaPredicted RBP6.99□□□□□ -1.29
GYPB-206ENST00000506516 RAD1O60671 282 aa6.99□□□□□ -1.29
GYPB-206ENST00000506516 SCRG1O75711 98 aa6.99□□□□□ -1.29
GYPB-206ENST00000506516 KIAA0754O94854 1291 aa6.99□□□□□ -1.29
GYPB-206ENST00000506516 CCNDBP1O95273 360 aa6.99□□□□□ -1.29
GYPB-206ENST00000506516 ACSL3O95573 720 aa6.99□□□□□ -1.29
GYPB-206ENST00000506516 SLC16A8O95907 504 aa6.99□□□□□ -1.29
GYPB-206ENST00000506516 HBQ1P09105 142 aa6.99□□□□□ -1.29
GYPB-206ENST00000506516 CCDC166P0CW27 439 aa6.99□□□□□ -1.29
GYPB-206ENST00000506516 ERGP11308 486 aa6.99□□□□□ -1.29
GYPB-206ENST00000506516 PVRP15151 417 aa6.99□□□□□ -1.29
GYPB-206ENST00000506516 ZNF37AP17032 561 aaPredicted RBP6.99□□□□□ -1.29
GYPB-206ENST00000506516 CCND1P24385 295 aa6.99□□□□□ -1.29
GYPB-206ENST00000506516 HRH2P25021 359 aa6.99□□□□□ -1.29
GYPB-206ENST00000506516 CRABP2P29373 138 aa6.99□□□□□ -1.29
GYPB-206ENST00000506516 ECHS1P30084 290 aa6.99□□□□□ -1.29
GYPB-206ENST00000506516 PEBP1P30086 187 aaKnown RBP6.99□□□□□ -1.29
GYPB-206ENST00000506516 ITGA1P56199 1179 aa6.99□□□□□ -1.29
GYPB-206ENST00000506516 AP1S2P56377 157 aa6.99□□□□□ -1.29
GYPB-206ENST00000506516 TMPRSS3P57727 454 aa6.99□□□□□ -1.29
GYPB-206ENST00000506516 RAB10P61026 200 aa6.99□□□□□ -1.29
GYPB-206ENST00000506516 ABATP80404 500 aa6.99□□□□□ -1.29
GYPB-206ENST00000506516 TLE3Q04726 772 aa6.99□□□□□ -1.29
GYPB-206ENST00000506516 PRDX1Q06830 199 aaKnown RBP6.99□□□□□ -1.29
GYPB-206ENST00000506516 ABHD18Q0P651 414 aa6.99□□□□□ -1.29
GYPB-206ENST00000506516 FASTKQ14296 549 aaKnown RBP6.99□□□□□ -1.29
GYPB-206ENST00000506516 TGIF1Q15583 401 aa6.99□□□□□ -1.29
GYPB-206ENST00000506516 GPR19Q15760 415 aa6.99□□□□□ -1.29
GYPB-206ENST00000506516 UAP1Q16222 522 aaPredicted RBP6.99□□□□□ -1.29
GYPB-206ENST00000506516 TEX35Q5T0J7 233 aa6.99□□□□□ -1.29
GYPB-206ENST00000506516 LGSNQ5TDP6 509 aa6.99□□□□□ -1.29
GYPB-206ENST00000506516 PWWP2BQ6NUJ5 590 aa6.99□□□□□ -1.29
GYPB-206ENST00000506516 SUSD1Q6UWL2 747 aa6.99□□□□□ -1.29
GYPB-206ENST00000506516 C6orf15Q6UXA7 325 aaPredicted RBP6.99□□□□□ -1.29
GYPB-206ENST00000506516 CCDC81Q6ZN84 652 aa6.99□□□□□ -1.29
GYPB-206ENST00000506516 CDHR3Q6ZTQ4 885 aa6.99□□□□□ -1.29
GYPB-206ENST00000506516 RAPH1Q70E73 1250 aa6.99□□□□□ -1.29
GYPB-206ENST00000506516 TRMT10CQ7L0Y3 403 aaKnown RBP6.99□□□□□ -1.29
GYPB-206ENST00000506516 TAOK1Q7L7X3 1001 aa6.99□□□□□ -1.29
GYPB-206ENST00000506516 CCDC91Q7Z6B0 441 aa6.99□□□□□ -1.29
GYPB-206ENST00000506516 TRIM73Q86UV7 250 aa6.99□□□□□ -1.29
GYPB-206ENST00000506516 TAX1BP1Q86VP1 789 aa6.99□□□□□ -1.29
GYPB-206ENST00000506516 ATCAYQ86WG3 371 aa6.99□□□□□ -1.29
GYPB-206ENST00000506516 DTX1Q86Y01 620 aa6.99□□□□□ -1.29
GYPB-206ENST00000506516 TMEM126BQ8IUX1 230 aa6.99□□□□□ -1.29
GYPB-206ENST00000506516 ESX1Q8N693 406 aa6.99□□□□□ -1.29
GYPB-206ENST00000506516 LMNTD1Q8N9Z9 388 aa6.99□□□□□ -1.29
GYPB-206ENST00000506516 OR2L3Q8NG85 312 aa6.99□□□□□ -1.29
GYPB-206ENST00000506516 OR2A1Q8NGT9 310 aa6.99□□□□□ -1.29
GYPB-206ENST00000506516 FLVCR1-AS1Q8TAF5 88 aa6.99□□□□□ -1.29
GYPB-206ENST00000506516 DENND1AQ8TEH3 1009 aa6.99□□□□□ -1.29
GYPB-206ENST00000506516 ZNF480Q8WV37 535 aa6.99□□□□□ -1.29
GYPB-206ENST00000506516 ATL1Q8WXF7 558 aa6.99□□□□□ -1.29
GYPB-206ENST00000506516 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.99□□□□□ -1.29
GYPB-206ENST00000506516 NKD1Q969G9 470 aa6.99□□□□□ -1.29
GYPB-206ENST00000506516 PMEPA1Q969W9 287 aa6.99□□□□□ -1.29
GYPB-206ENST00000506516 KIAA1143Q96AT1 154 aaPredicted RBP6.99□□□□□ -1.29
GYPB-206ENST00000506516 GPR22Q99680 433 aa6.99□□□□□ -1.29
GYPB-206ENST00000506516 MIPEPQ99797 713 aa6.99□□□□□ -1.29
GYPB-206ENST00000506516 MCMBPQ9BTE3 642 aa6.99□□□□□ -1.29
GYPB-206ENST00000506516 SPRY4Q9C004 299 aa6.99□□□□□ -1.29
GYPB-206ENST00000506516 DERL2Q9GZP9 239 aa6.99□□□□□ -1.29
GYPB-206ENST00000506516 PCBD2Q9H0N5 130 aa6.99□□□□□ -1.29
GYPB-206ENST00000506516 MRPS30Q9NP92 439 aaKnown RBP6.99□□□□□ -1.29
GYPB-206ENST00000506516 ABCF3Q9NUQ8 709 aa6.99□□□□□ -1.29
GYPB-206ENST00000506516 IRAK4Q9NWZ3 460 aa6.99□□□□□ -1.29
GYPB-206ENST00000506516 ARL15Q9NXU5 204 aa6.99□□□□□ -1.29
GYPB-206ENST00000506516 CTNNAL1Q9UBT7 734 aa6.99□□□□□ -1.29
GYPB-206ENST00000506516 DCTN4Q9UJW0 460 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms