RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 ITIH1P19827 911 aa3.06□□□□□ -1.92
TRAPPC11-205ENST00000506426 TKTP29401 623 aaKnown RBP3.06□□□□□ -1.92
TRAPPC11-205ENST00000506426 TIA1P31483 386 aaKnown RBP eCLIP3.06□□□□□ -1.92
TRAPPC11-205ENST00000506426 SLC6A6P31641 620 aa3.06□□□□□ -1.92
TRAPPC11-205ENST00000506426 USP8P40818 1118 aa3.06□□□□□ -1.92
TRAPPC11-205ENST00000506426 CASP3P42574 277 aa3.06□□□□□ -1.92
TRAPPC11-205ENST00000506426 KCNJ1P48048 391 aa3.06□□□□□ -1.92
TRAPPC11-205ENST00000506426 RGS7P49802 495 aa3.06□□□□□ -1.92
TRAPPC11-205ENST00000506426 INHBEP58166 350 aa3.06□□□□□ -1.92
TRAPPC11-205ENST00000506426 ISL1P61371 349 aa3.06□□□□□ -1.92
TRAPPC11-205ENST00000506426 TEFQ10587 303 aa3.06□□□□□ -1.92
TRAPPC11-205ENST00000506426 TRAF3Q13114 568 aa3.06□□□□□ -1.92
TRAPPC11-205ENST00000506426 RPA4Q13156 261 aa3.06□□□□□ -1.92
TRAPPC11-205ENST00000506426 MYBPHQ13203 477 aa3.06□□□□□ -1.92
TRAPPC11-205ENST00000506426 GTF2H2Q13888 395 aa3.06□□□□□ -1.92
TRAPPC11-205ENST00000506426 FUT11Q495W5 492 aa3.06□□□□□ -1.92
TRAPPC11-205ENST00000506426 ASPRV1Q53RT3 343 aa3.06□□□□□ -1.92
TRAPPC11-205ENST00000506426 SYT14P1Q58G82 188 aa3.06□□□□□ -1.92
TRAPPC11-205ENST00000506426 TXNRD3NBQ6F5E7 133 aa3.06□□□□□ -1.92
TRAPPC11-205ENST00000506426 OR7E24Q6IFN5 339 aa3.06□□□□□ -1.92
TRAPPC11-205ENST00000506426 C11orf63Q6NUN7 778 aa3.06□□□□□ -1.92
TRAPPC11-205ENST00000506426 GTF2H2CQ6P1K8 395 aa3.06□□□□□ -1.92
TRAPPC11-205ENST00000506426 NOTUMQ6P988 496 aa3.06□□□□□ -1.92
TRAPPC11-205ENST00000506426 SLC27A1Q6PCB7 646 aa3.06□□□□□ -1.92
TRAPPC11-205ENST00000506426 RHBDF2Q6PJF5 856 aa3.06□□□□□ -1.92
TRAPPC11-205ENST00000506426 USP54Q70EL1 1684 aa3.06□□□□□ -1.92
TRAPPC11-205ENST00000506426 NUP54Q7Z3B4 507 aa3.06□□□□□ -1.92
TRAPPC11-205ENST00000506426 TECPR1Q7Z6L1 1165 aa3.06□□□□□ -1.92
TRAPPC11-205ENST00000506426 FOXP4Q8IVH2 680 aaPredicted RBP3.06□□□□□ -1.92
TRAPPC11-205ENST00000506426 CLIP4Q8N3C7 705 aa3.06□□□□□ -1.92
TRAPPC11-205ENST00000506426 RYBPQ8N488 228 aaPredicted RBP3.06□□□□□ -1.92
TRAPPC11-205ENST00000506426 CPSF7Q8N684 471 aaKnown RBP3.06□□□□□ -1.92
TRAPPC11-205ENST00000506426 ANKRD13CQ8N6S4 541 aa3.06□□□□□ -1.92
TRAPPC11-205ENST00000506426 L3MBTL4Q8NA19 623 aa3.06□□□□□ -1.92
TRAPPC11-205ENST00000506426 UXS1Q8NBZ7 420 aa3.06□□□□□ -1.92
TRAPPC11-205ENST00000506426 ZNF114Q8NC26 417 aa3.06□□□□□ -1.92
TRAPPC11-205ENST00000506426 RNF128Q8TEB7 428 aa3.06□□□□□ -1.92
TRAPPC11-205ENST00000506426 SLC20A1Q8WUM9 679 aa3.06□□□□□ -1.92
TRAPPC11-205ENST00000506426 CCDC107Q8WV48 283 aa3.06□□□□□ -1.92
TRAPPC11-205ENST00000506426 DHX58Q96C10 678 aa3.06□□□□□ -1.92
TRAPPC11-205ENST00000506426 TMEM19Q96HH6 336 aa3.06□□□□□ -1.92
TRAPPC11-205ENST00000506426 COG3Q96JB2 828 aa3.06□□□□□ -1.92
TRAPPC11-205ENST00000506426 USP47Q96K76 1375 aa3.06□□□□□ -1.92
TRAPPC11-205ENST00000506426 SPATA33Q96N06 139 aa3.06□□□□□ -1.92
TRAPPC11-205ENST00000506426 TESK2Q96S53 571 aa3.06□□□□□ -1.92
TRAPPC11-205ENST00000506426 MAP3K5Q99683 1374 aa3.06□□□□□ -1.92
TRAPPC11-205ENST00000506426 C1QTNF7Q9BXJ2 289 aa3.06□□□□□ -1.92
TRAPPC11-205ENST00000506426 NSD3Q9BZ95 1437 aa3.06□□□□□ -1.92
TRAPPC11-205ENST00000506426 MRPL44Q9H9J2 332 aaKnown RBP3.06□□□□□ -1.92
TRAPPC11-205ENST00000506426 LMAN1LQ9HAT1 526 aa3.06□□□□□ -1.92
TRAPPC11-205ENST00000506426 Q9N2K0 584 aa3.06□□□□□ -1.92
TRAPPC11-205ENST00000506426 ACKR4Q9NPB9 350 aa3.06□□□□□ -1.92
TRAPPC11-205ENST00000506426 KLHL1Q9NR64 748 aa3.06□□□□□ -1.92
TRAPPC11-205ENST00000506426 SERINC1Q9NRX5 453 aa3.06□□□□□ -1.92
TRAPPC11-205ENST00000506426 DNAJC17Q9NVM6 304 aaKnown RBP3.06□□□□□ -1.92
TRAPPC11-205ENST00000506426 ZNF224Q9NZL3 707 aa3.06□□□□□ -1.92
TRAPPC11-205ENST00000506426 CNIH4Q9P003 139 aa3.06□□□□□ -1.92
TRAPPC11-205ENST00000506426 TXNDC16Q9P2K2 825 aa3.06□□□□□ -1.92
TRAPPC11-205ENST00000506426 B3GAT1Q9P2W7 334 aa3.06□□□□□ -1.92
TRAPPC11-205ENST00000506426 VDAC3Q9Y277 283 aa3.06□□□□□ -1.92
TRAPPC11-205ENST00000506426 OR2W1Q9Y3N9 320 aa3.06□□□□□ -1.92
TRAPPC11-205ENST00000506426 TUBGCP6Q96RT7 1819 aa3.05□□□□□ -1.92
TRAPPC11-205ENST00000506426 TOGARAM1Q9Y4F4 1720 aa3.05□□□□□ -1.92
TRAPPC11-205ENST00000506426 CEP350Q5VT06 3117 aa3.05□□□□□ -1.92
TRAPPC11-205ENST00000506426 SMG6Q86US8 1419 aaKnown RBP3.05□□□□□ -1.92
TRAPPC11-205ENST00000506426 RTL1A6NKG5 1358 aa3.05□□□□□ -1.92
TRAPPC11-205ENST00000506426 IGLV5-37A0A075B6J1 123 aa3.05□□□□□ -1.92
TRAPPC11-205ENST00000506426 GTPBP10A4D1E9 387 aaKnown RBP3.05□□□□□ -1.92
TRAPPC11-205ENST00000506426 FAM90A10PA6NDY2 464 aa3.05□□□□□ -1.92
TRAPPC11-205ENST00000506426 DUXAA6NLW8 204 aa3.05□□□□□ -1.92
TRAPPC11-205ENST00000506426 ST8SIA3O43173 380 aa3.05□□□□□ -1.92
TRAPPC11-205ENST00000506426 SELENOFO60613 162 aa3.05□□□□□ -1.92
TRAPPC11-205ENST00000506426 FCGR3BO75015 233 aa3.05□□□□□ -1.92
TRAPPC11-205ENST00000506426 WDR1O75083 606 aa3.05□□□□□ -1.92
TRAPPC11-205ENST00000506426 PPFIA2O75334 1257 aa3.05□□□□□ -1.92
TRAPPC11-205ENST00000506426 CRCPO75575 148 aa3.05□□□□□ -1.92
TRAPPC11-205ENST00000506426 SLC22A3O75751 556 aa3.05□□□□□ -1.92
TRAPPC11-205ENST00000506426 PMS2P2O95744 297 aa3.05□□□□□ -1.92
TRAPPC11-205ENST00000506426 CRYABP02511 175 aaKnown RBP3.05□□□□□ -1.92
TRAPPC11-205ENST00000506426 TFAP2AP05549 437 aa3.05□□□□□ -1.92
TRAPPC11-205ENST00000506426 INHBAP08476 426 aa3.05□□□□□ -1.92
TRAPPC11-205ENST00000506426 SMIM18P0DKX4 95 aa3.05□□□□□ -1.92
TRAPPC11-205ENST00000506426 UROSP10746 265 aa3.05□□□□□ -1.92
TRAPPC11-205ENST00000506426 EPCAMP16422 314 aa3.05□□□□□ -1.92
TRAPPC11-205ENST00000506426 PTGER4P35408 488 aa3.05□□□□□ -1.92
TRAPPC11-205ENST00000506426 NR4A2P43354 598 aa3.05□□□□□ -1.92
TRAPPC11-205ENST00000506426 TNNT2P45379 298 aaPredicted RBP3.05□□□□□ -1.92
TRAPPC11-205ENST00000506426 ARCN1P48444 511 aaKnown RBP3.05□□□□□ -1.92
TRAPPC11-205ENST00000506426 GMPSP49915 693 aaPredicted RBP3.05□□□□□ -1.92
TRAPPC11-205ENST00000506426 KHKP50053 298 aa3.05□□□□□ -1.92
TRAPPC11-205ENST00000506426 MMP15P51511 669 aa3.05□□□□□ -1.92
TRAPPC11-205ENST00000506426 MFAP3P55082 362 aa3.05□□□□□ -1.92
TRAPPC11-205ENST00000506426 NANOS3P60323 173 aaKnown RBP3.05□□□□□ -1.92
TRAPPC11-205ENST00000506426 SEC61A1P61619 476 aaKnown RBP3.05□□□□□ -1.92
TRAPPC11-205ENST00000506426 RPS18P62269 152 aaKnown RBP3.05□□□□□ -1.92
TRAPPC11-205ENST00000506426 ARF5P84085 180 aa3.05□□□□□ -1.92
TRAPPC11-205ENST00000506426 RUNX1T1Q06455 604 aa3.05□□□□□ -1.92
TRAPPC11-205ENST00000506426 SLC20A2Q08357 652 aa3.05□□□□□ -1.92
TRAPPC11-205ENST00000506426 PRKAA1Q13131 559 aa3.05□□□□□ -1.92
TRAPPC11-205ENST00000506426 CBX3Q13185 183 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms