RNA–Protein interactions for RNA: ENST00000506419.5

CDC42SE2-209, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-209ENST00000506419 RAB42Q8N4Z0 105 aa13.76□□□□□ -0.21
CDC42SE2-209ENST00000506419 ACTRT1Q8TDG2 376 aa13.76□□□□□ -0.21
CDC42SE2-209ENST00000506419 ASB11Q8WXH4 323 aa13.76□□□□□ -0.21
CDC42SE2-209ENST00000506419 C19orf60Q96EN9 201 aa13.76□□□□□ -0.21
CDC42SE2-209ENST00000506419 OSBPL9Q96SU4 736 aa13.76□□□□□ -0.21
CDC42SE2-209ENST00000506419 DPH7Q9BTV6 452 aa13.76□□□□□ -0.21
CDC42SE2-209ENST00000506419 SLC26A1Q9H2B4 701 aa13.76□□□□□ -0.21
CDC42SE2-209ENST00000506419 XAB2Q9HCS7 855 aaKnown RBP13.76□□□□□ -0.21
CDC42SE2-209ENST00000506419 SAMD15Q9P1V8 674 aa13.76□□□□□ -0.21
CDC42SE2-209ENST00000506419 C5AR2Q9P296 337 aa13.76□□□□□ -0.21
CDC42SE2-209ENST00000506419 DHRS7Q9Y394 339 aa13.76□□□□□ -0.21
CDC42SE2-209ENST00000506419 MRFAP1Q9Y605 127 aa13.76□□□□□ -0.21
CDC42SE2-209ENST00000506419 MAU2Q9Y6X3 613 aa13.76□□□□□ -0.21
CDC42SE2-209ENST00000506419 USP9YO00507 2555 aaPredicted RBP13.76□□□□□ -0.21
CDC42SE2-209ENST00000506419 CTAGE9A4FU28 777 aa13.75□□□□□ -0.21
CDC42SE2-209ENST00000506419 H0YGG7 62 aa13.75□□□□□ -0.21
CDC42SE2-209ENST00000506419 GFYI3L273 518 aa13.75□□□□□ -0.21
CDC42SE2-209ENST00000506419 PGRMC1O00264 195 aaKnown RBP13.75□□□□□ -0.21
CDC42SE2-209ENST00000506419 ALOX12BO75342 701 aa13.75□□□□□ -0.21
CDC42SE2-209ENST00000506419 USP1O94782 785 aa13.75□□□□□ -0.21
CDC42SE2-209ENST00000506419 EIF2S1P05198 315 aaKnown RBP13.75□□□□□ -0.21
CDC42SE2-209ENST00000506419 MMP11P24347 488 aa13.75□□□□□ -0.21
CDC42SE2-209ENST00000506419 ARF3P61204 181 aaPredicted RBP13.75□□□□□ -0.21
CDC42SE2-209ENST00000506419 MPP1Q00013 466 aa13.75□□□□□ -0.21
CDC42SE2-209ENST00000506419 CUL1Q13616 776 aa13.75□□□□□ -0.21
CDC42SE2-209ENST00000506419 THOC5Q13769 683 aaKnown RBP13.75□□□□□ -0.21
CDC42SE2-209ENST00000506419 PRTGQ2VWP7 1150 aa13.75□□□□□ -0.21
CDC42SE2-209ENST00000506419 FAM214AQ32MH5 1076 aa13.75□□□□□ -0.21
CDC42SE2-209ENST00000506419 VWA5B1Q5TIE3 1220 aa13.75□□□□□ -0.21
CDC42SE2-209ENST00000506419 YOD1Q5VVQ6 348 aaPredicted RBP13.75□□□□□ -0.21
CDC42SE2-209ENST00000506419 KIRREL2Q6UWL6 708 aa13.75□□□□□ -0.21
CDC42SE2-209ENST00000506419 PAQR7Q86WK9 346 aa13.75□□□□□ -0.21
CDC42SE2-209ENST00000506419 LRRC56Q8IYG6 542 aaPredicted RBP13.75□□□□□ -0.21
CDC42SE2-209ENST00000506419 FAM26EQ8N5C1 309 aa13.75□□□□□ -0.21
CDC42SE2-209ENST00000506419 TTC29Q8NA56 475 aaPredicted RBP13.75□□□□□ -0.21
CDC42SE2-209ENST00000506419 GALNT11Q8NCW6 608 aa13.75□□□□□ -0.21
CDC42SE2-209ENST00000506419 PPFIBP2Q8ND30 876 aa13.75□□□□□ -0.21
CDC42SE2-209ENST00000506419 ZNF480Q8WV37 535 aa13.75□□□□□ -0.21
CDC42SE2-209ENST00000506419 SMPDL3AQ92484 453 aa13.75□□□□□ -0.21
CDC42SE2-209ENST00000506419 INPP5DQ92835 1189 aa13.75□□□□□ -0.21
CDC42SE2-209ENST00000506419 PNPLA2Q96AD5 504 aa13.75□□□□□ -0.21
CDC42SE2-209ENST00000506419 FKBP10Q96AY3 582 aa13.75□□□□□ -0.21
CDC42SE2-209ENST00000506419 PLCD4Q9BRC7 762 aa13.75□□□□□ -0.21
CDC42SE2-209ENST00000506419 SOX17Q9H6I2 414 aaPredicted RBP13.75□□□□□ -0.21
CDC42SE2-209ENST00000506419 ATP13A2Q9NQ11 1180 aa13.75□□□□□ -0.21
CDC42SE2-209ENST00000506419 C20orf96Q9NUD7 363 aaPredicted RBP13.75□□□□□ -0.21
CDC42SE2-209ENST00000506419 KLHL42Q9P2K6 505 aa13.75□□□□□ -0.21
CDC42SE2-209ENST00000506419 CTSFQ9UBX1 484 aa13.75□□□□□ -0.21
CDC42SE2-209ENST00000506419 HS3ST3B1Q9Y662 390 aa13.75□□□□□ -0.21
CDC42SE2-209ENST00000506419 FAM169AQ9Y6X4 670 aa13.75□□□□□ -0.21
CDC42SE2-209ENST00000506419 E5RI56 91 aa13.74□□□□□ -0.21
CDC42SE2-209ENST00000506419 E7ENX8 843 aa13.74□□□□□ -0.21
CDC42SE2-209ENST00000506419 AGPSO00116 658 aa13.74□□□□□ -0.21
CDC42SE2-209ENST00000506419 PHF2O75151 1096 aa13.74□□□□□ -0.21
CDC42SE2-209ENST00000506419 VPS4BO75351 444 aa13.74□□□□□ -0.21
CDC42SE2-209ENST00000506419 SLC16A8O95907 504 aa13.74□□□□□ -0.21
CDC42SE2-209ENST00000506419 PIM1P11309 404 aaPredicted RBP13.74□□□□□ -0.21
CDC42SE2-209ENST00000506419 GABRB3P28472 473 aa13.74□□□□□ -0.21
CDC42SE2-209ENST00000506419 CMPK1P30085 196 aa13.74□□□□□ -0.21
CDC42SE2-209ENST00000506419 SLC1A2P43004 574 aa13.74□□□□□ -0.21
CDC42SE2-209ENST00000506419 PNLIPRP1P54315 467 aa13.74□□□□□ -0.21
CDC42SE2-209ENST00000506419 SNRPNP63162 240 aaKnown RBP13.74□□□□□ -0.21
CDC42SE2-209ENST00000506419 TAP2Q03519 686 aa13.74□□□□□ -0.21
CDC42SE2-209ENST00000506419 PRDX1Q06830 199 aaKnown RBP13.74□□□□□ -0.21
CDC42SE2-209ENST00000506419 LONRF1Q17RB8 773 aa13.74□□□□□ -0.21
CDC42SE2-209ENST00000506419 HSP90AA5PQ58FG0 334 aa13.74□□□□□ -0.21
CDC42SE2-209ENST00000506419 CRB2Q5IJ48 1285 aa13.74□□□□□ -0.21
CDC42SE2-209ENST00000506419 RNASEH2BQ5TBB1 312 aaKnown RBP13.74□□□□□ -0.21
CDC42SE2-209ENST00000506419 NEK10Q6ZWH5 1172 aa13.74□□□□□ -0.21
CDC42SE2-209ENST00000506419 LAPTM4BQ86VI4 370 aa13.74□□□□□ -0.21
CDC42SE2-209ENST00000506419 HPS6Q86YV9 775 aa13.74□□□□□ -0.21
CDC42SE2-209ENST00000506419 EFCAB3Q8N7B9 438 aa13.74□□□□□ -0.21
CDC42SE2-209ENST00000506419 CLEC1AQ8NC01 280 aa13.74□□□□□ -0.21
CDC42SE2-209ENST00000506419 NACC2Q96BF6 587 aa13.74□□□□□ -0.21
CDC42SE2-209ENST00000506419 C10orf90Q96M02 699 aa13.74□□□□□ -0.21
CDC42SE2-209ENST00000506419 PSMG3-AS1Q96PY0 264 aa13.74□□□□□ -0.21
CDC42SE2-209ENST00000506419 GPR21Q99679 349 aa13.74□□□□□ -0.21
CDC42SE2-209ENST00000506419 KCNF1Q9H3M0 494 aa13.74□□□□□ -0.21
CDC42SE2-209ENST00000506419 WDR54Q9H977 334 aa13.74□□□□□ -0.21
CDC42SE2-209ENST00000506419 ZNF304Q9HCX3 659 aa13.74□□□□□ -0.21
CDC42SE2-209ENST00000506419 SLAMF7Q9NQ25 335 aa13.74□□□□□ -0.21
CDC42SE2-209ENST00000506419 IARS2Q9NSE4 1012 aaKnown RBP13.74□□□□□ -0.21
CDC42SE2-209ENST00000506419 TRMT1Q9NXH9 659 aaKnown RBP13.74□□□□□ -0.21
CDC42SE2-209ENST00000506419 CDC23Q9UJX2 597 aa13.74□□□□□ -0.21
CDC42SE2-209ENST00000506419 FBXL4Q9UKA2 621 aa13.74□□□□□ -0.21
CDC42SE2-209ENST00000506419 FBXO5Q9UKT4 447 aa13.74□□□□□ -0.21
CDC42SE2-209ENST00000506419 VPS4AQ9UN37 437 aa13.74□□□□□ -0.21
CDC42SE2-209ENST00000506419 VPS9D1Q9Y2B5 631 aa13.74□□□□□ -0.21
CDC42SE2-209ENST00000506419 MAD1L1Q9Y6D9 718 aa13.74□□□□□ -0.21
CDC42SE2-209ENST00000506419 TCP11X1B4DZS4 312 aa13.73□□□□□ -0.21
CDC42SE2-209ENST00000506419 NRDCO43847 1150 aa13.73□□□□□ -0.21
CDC42SE2-209ENST00000506419 BANF1O75531 89 aa13.73□□□□□ -0.21
CDC42SE2-209ENST00000506419 IGHEP01854 428 aa13.73□□□□□ -0.21
CDC42SE2-209ENST00000506419 CATP04040 527 aaKnown RBP13.73□□□□□ -0.21
CDC42SE2-209ENST00000506419 MPC1LP0DKB6 136 aa13.73□□□□□ -0.21
CDC42SE2-209ENST00000506419 RPA3P35244 121 aaPredicted RBP13.73□□□□□ -0.21
CDC42SE2-209ENST00000506419 FNTAP49354 379 aa13.73□□□□□ -0.21
CDC42SE2-209ENST00000506419 Q0VFX4 171 aa13.73□□□□□ -0.21
CDC42SE2-209ENST00000506419 ARHGAP19Q14CB8 494 aa13.73□□□□□ -0.21
CDC42SE2-209ENST00000506419 MSS51Q4VC12 460 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms