RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 SNX3O60493 162 aa3.57□□□□□ -1.84
TOPBP1-204ENST00000505804 GLRA3O75311 464 aa3.57□□□□□ -1.84
TOPBP1-204ENST00000505804 ZNF821O75541 412 aaPredicted RBP3.57□□□□□ -1.84
TOPBP1-204ENST00000505804 RPS6KA5O75582 802 aa3.57□□□□□ -1.84
TOPBP1-204ENST00000505804 CDK2AP2O75956 126 aa3.57□□□□□ -1.84
TOPBP1-204ENST00000505804 HSPA4LO95757 839 aa3.57□□□□□ -1.84
TOPBP1-204ENST00000505804 IGLV1-44P01699 117 aa3.57□□□□□ -1.84
TOPBP1-204ENST00000505804 PDGFRAP16234 1089 aa3.57□□□□□ -1.84
TOPBP1-204ENST00000505804 CEBPBP17676 345 aa3.57□□□□□ -1.84
TOPBP1-204ENST00000505804 ACAT1P24752 427 aaKnown RBP3.57□□□□□ -1.84
TOPBP1-204ENST00000505804 ALDH1B1P30837 517 aa3.57□□□□□ -1.84
TOPBP1-204ENST00000505804 HSD17B3P37058 310 aa3.57□□□□□ -1.84
TOPBP1-204ENST00000505804 CRKLP46109 303 aaKnown RBP3.57□□□□□ -1.84
TOPBP1-204ENST00000505804 SNRPD1P62314 119 aaKnown RBP3.57□□□□□ -1.84
TOPBP1-204ENST00000505804 DLK1P80370 383 aa3.57□□□□□ -1.84
TOPBP1-204ENST00000505804 TFCP2Q12800 502 aa3.57□□□□□ -1.84
TOPBP1-204ENST00000505804 HNRNPDQ14103 355 aaKnown RBP3.57□□□□□ -1.84
TOPBP1-204ENST00000505804 PSMD6Q15008 389 aa3.57□□□□□ -1.84
TOPBP1-204ENST00000505804 MRGPRG-AS1Q2M3A8 158 aa3.57□□□□□ -1.84
TOPBP1-204ENST00000505804 C6orf136Q5SQH8 315 aa3.57□□□□□ -1.84
TOPBP1-204ENST00000505804 OR4A47Q6IF82 309 aa3.57□□□□□ -1.84
TOPBP1-204ENST00000505804 UGT3A1Q6NUS8 523 aa3.57□□□□□ -1.84
TOPBP1-204ENST00000505804 PSRC1Q6PGN9 363 aaPredicted RBP3.57□□□□□ -1.84
TOPBP1-204ENST00000505804 VSIG1Q86XK7 387 aa3.57□□□□□ -1.84
TOPBP1-204ENST00000505804 RYBPQ8N488 228 aaPredicted RBP3.57□□□□□ -1.84
TOPBP1-204ENST00000505804 NIPA2Q8N8Q9 360 aa3.57□□□□□ -1.84
TOPBP1-204ENST00000505804 NOA1Q8NC60 698 aaKnown RBP3.57□□□□□ -1.84
TOPBP1-204ENST00000505804 ADAD2Q8NCV1 583 aaKnown RBP3.57□□□□□ -1.84
TOPBP1-204ENST00000505804 MRGPRDQ8TDS7 321 aa3.57□□□□□ -1.84
TOPBP1-204ENST00000505804 DYRK2Q92630 601 aa3.57□□□□□ -1.84
TOPBP1-204ENST00000505804 NSMAFQ92636 917 aa3.57□□□□□ -1.84
TOPBP1-204ENST00000505804 RMDN2Q96LZ7 410 aa3.57□□□□□ -1.84
TOPBP1-204ENST00000505804 SPATA33Q96N06 139 aa3.57□□□□□ -1.84
TOPBP1-204ENST00000505804 RAB3IPQ96QF0 476 aaPredicted RBP3.57□□□□□ -1.84
TOPBP1-204ENST00000505804 MGME1Q9BQP7 344 aa3.57□□□□□ -1.84
TOPBP1-204ENST00000505804 PIGQQ9BRB3 760 aa3.57□□□□□ -1.84
TOPBP1-204ENST00000505804 FN3KQ9H479 309 aa3.57□□□□□ -1.84
TOPBP1-204ENST00000505804 PPANQ9NQ55 473 aaKnown RBP3.57□□□□□ -1.84
TOPBP1-204ENST00000505804 CHCHD3Q9NX63 227 aaKnown RBP3.57□□□□□ -1.84
TOPBP1-204ENST00000505804 OR6C2Q9NZP2 312 aa3.57□□□□□ -1.84
TOPBP1-204ENST00000505804 ERRFI1Q9UJM3 462 aaPredicted RBP3.57□□□□□ -1.84
TOPBP1-204ENST00000505804 GRID1Q9ULK0 1009 aa3.57□□□□□ -1.84
TOPBP1-204ENST00000505804 CHKBQ9Y259 395 aa3.57□□□□□ -1.84
TOPBP1-204ENST00000505804 HEG1Q9ULI3 1381 aa3.56□□□□□ -1.84
TOPBP1-204ENST00000505804 MEIOCA2RUB1 952 aa3.56□□□□□ -1.84
TOPBP1-204ENST00000505804 EXTL3O43909 919 aa3.56□□□□□ -1.84
TOPBP1-204ENST00000505804 KHDRBS3O75525 346 aaKnown RBP3.56□□□□□ -1.84
TOPBP1-204ENST00000505804 PSMA3P25788 255 aa3.56□□□□□ -1.84
TOPBP1-204ENST00000505804 BMXP51813 675 aa3.56□□□□□ -1.84
TOPBP1-204ENST00000505804 MTCP1P56278 107 aa3.56□□□□□ -1.84
TOPBP1-204ENST00000505804 TRAP1Q12931 704 aaKnown RBP3.56□□□□□ -1.84
TOPBP1-204ENST00000505804 TUBB2AQ13885 445 aa3.56□□□□□ -1.84
TOPBP1-204ENST00000505804 EXT1Q16394 746 aa3.56□□□□□ -1.84
TOPBP1-204ENST00000505804 CTU2Q2VPK5 515 aaKnown RBP3.56□□□□□ -1.84
TOPBP1-204ENST00000505804 PDLIM3Q53GG5 364 aaPredicted RBP3.56□□□□□ -1.84
TOPBP1-204ENST00000505804 CEP85LQ5SZL2 805 aa3.56□□□□□ -1.84
TOPBP1-204ENST00000505804 ADAMTSL4-AS1Q5T5F5 129 aa3.56□□□□□ -1.84
TOPBP1-204ENST00000505804 ARMC3Q5W041 872 aa3.56□□□□□ -1.84
TOPBP1-204ENST00000505804 PWWP2BQ6NUJ5 590 aa3.56□□□□□ -1.84
TOPBP1-204ENST00000505804 TRAT1Q6PIZ9 186 aa3.56□□□□□ -1.84
TOPBP1-204ENST00000505804 ENPP7Q6UWV6 458 aa3.56□□□□□ -1.84
TOPBP1-204ENST00000505804 C11orf57Q6ZUT1 292 aaPredicted RBP3.56□□□□□ -1.84
TOPBP1-204ENST00000505804 IL17RELQ6ZVW7 336 aa3.56□□□□□ -1.84
TOPBP1-204ENST00000505804 G2E3Q7L622 706 aa3.56□□□□□ -1.84
TOPBP1-204ENST00000505804 PTAR1Q7Z6K3 402 aaPredicted RBP3.56□□□□□ -1.84
TOPBP1-204ENST00000505804 ABI3BPQ7Z7G0 1075 aa3.56□□□□□ -1.84
TOPBP1-204ENST00000505804 LACC1Q8IV20 430 aa3.56□□□□□ -1.84
TOPBP1-204ENST00000505804 DCLK2Q8N568 766 aa3.56□□□□□ -1.84
TOPBP1-204ENST00000505804 KLHDC1Q8N7A1 406 aa3.56□□□□□ -1.84
TOPBP1-204ENST00000505804 DBF4BQ8NFT6 615 aa3.56□□□□□ -1.84
TOPBP1-204ENST00000505804 ARHGAP45Q92619 1136 aa3.56□□□□□ -1.84
TOPBP1-204ENST00000505804 MAGED4Q96JG8 741 aa3.56□□□□□ -1.84
TOPBP1-204ENST00000505804 C10orf90Q96M02 699 aa3.56□□□□□ -1.84
TOPBP1-204ENST00000505804 TUBB2BQ9BVA1 445 aa3.56□□□□□ -1.84
TOPBP1-204ENST00000505804 FAM49AQ9H0Q0 323 aaPredicted RBP3.56□□□□□ -1.84
TOPBP1-204ENST00000505804 THAP2Q9H0W7 228 aa3.56□□□□□ -1.84
TOPBP1-204ENST00000505804 WDR13Q9H1Z4 485 aa3.56□□□□□ -1.84
TOPBP1-204ENST00000505804 P2RY12Q9H244 342 aa3.56□□□□□ -1.84
TOPBP1-204ENST00000505804 SNX25Q9H3E2 840 aa3.56□□□□□ -1.84
TOPBP1-204ENST00000505804 FGF22Q9HCT0 170 aa3.56□□□□□ -1.84
TOPBP1-204ENST00000505804 CHST11Q9NPF2 352 aa3.56□□□□□ -1.84
TOPBP1-204ENST00000505804 ATAD3AQ9NVI7 634 aa3.56□□□□□ -1.84
TOPBP1-204ENST00000505804 RNF186Q9NXI6 227 aa3.56□□□□□ -1.84
TOPBP1-204ENST00000505804 CACNG5Q9UF02 275 aa3.56□□□□□ -1.84
TOPBP1-204ENST00000505804 EPHA6Q9UF33 1036 aa3.56□□□□□ -1.84
TOPBP1-204ENST00000505804 SNX7Q9UNH6 387 aa3.56□□□□□ -1.84
TOPBP1-204ENST00000505804 MYH14Q7Z406 1995 aaKnown RBP3.55□□□□□ -1.84
TOPBP1-204ENST00000505804 MYH15Q9Y2K3 1946 aa3.55□□□□□ -1.84
TOPBP1-204ENST00000505804 A0A1W2PPW3 197 aa3.55□□□□□ -1.84
TOPBP1-204ENST00000505804 ARHGEF37A1IGU5 675 aa3.55□□□□□ -1.84
TOPBP1-204ENST00000505804 SNURFLB1AK76 121 aa3.55□□□□□ -1.84
TOPBP1-204ENST00000505804 CCDC188H7C350 402 aa3.55□□□□□ -1.84
TOPBP1-204ENST00000505804 CCL24O00175 119 aa3.55□□□□□ -1.84
TOPBP1-204ENST00000505804 FPGTO14772 594 aa3.55□□□□□ -1.84
TOPBP1-204ENST00000505804 TBCAO75347 108 aaKnown RBP3.55□□□□□ -1.84
TOPBP1-204ENST00000505804 GBAP04062 536 aa3.55□□□□□ -1.84
TOPBP1-204ENST00000505804 GP1BBP13224 206 aa3.55□□□□□ -1.84
TOPBP1-204ENST00000505804 IFNAR1P17181 557 aa3.55□□□□□ -1.84
TOPBP1-204ENST00000505804 PRKCIP41743 596 aa3.55□□□□□ -1.84
TOPBP1-204ENST00000505804 LBX1P52954 281 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms