RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 XPO7Q9UIA9 1087 aaKnown RBP3.66□□□□□ -1.82
TRAPPC13-208ENST00000505553 RUVBL2Q9Y230 463 aaKnown RBP3.66□□□□□ -1.82
TRAPPC13-208ENST00000505553 HBS1LQ9Y450 684 aaKnown RBP3.66□□□□□ -1.82
TRAPPC13-208ENST00000505553 IKBKGQ9Y6K9 419 aa3.66□□□□□ -1.82
TRAPPC13-208ENST00000505553 PCDH11YQ9BZA8 1340 aa3.66□□□□□ -1.82
TRAPPC13-208ENST00000505553 PEX11AO75192 247 aa3.65□□□□□ -1.83
TRAPPC13-208ENST00000505553 FAM106CPP0CH98 169 aa3.65□□□□□ -1.83
TRAPPC13-208ENST00000505553 STAG3L1P0CL83 205 aa3.65□□□□□ -1.83
TRAPPC13-208ENST00000505553 CPA3P15088 417 aa3.65□□□□□ -1.83
TRAPPC13-208ENST00000505553 ACP1P24666 158 aa3.65□□□□□ -1.83
TRAPPC13-208ENST00000505553 MNDAP41218 407 aa3.65□□□□□ -1.83
TRAPPC13-208ENST00000505553 SMSP52788 366 aa3.65□□□□□ -1.83
TRAPPC13-208ENST00000505553 SEC61A1P61619 476 aaKnown RBP3.65□□□□□ -1.83
TRAPPC13-208ENST00000505553 CACNG1Q06432 222 aa3.65□□□□□ -1.83
TRAPPC13-208ENST00000505553 KLC1Q07866 573 aa3.65□□□□□ -1.83
TRAPPC13-208ENST00000505553 IL10RBQ08334 325 aa3.65□□□□□ -1.83
TRAPPC13-208ENST00000505553 CETN1Q12798 172 aa3.65□□□□□ -1.83
TRAPPC13-208ENST00000505553 PPP1R8Q12972 351 aaKnown RBP3.65□□□□□ -1.83
TRAPPC13-208ENST00000505553 PRKAA1Q13131 559 aa3.65□□□□□ -1.83
TRAPPC13-208ENST00000505553 GPS2Q13227 327 aa3.65□□□□□ -1.83
TRAPPC13-208ENST00000505553 DPYSQ14117 519 aa3.65□□□□□ -1.83
TRAPPC13-208ENST00000505553 ZNF234Q14588 700 aa3.65□□□□□ -1.83
TRAPPC13-208ENST00000505553 RBMS2Q15434 407 aaKnown RBP3.65□□□□□ -1.83
TRAPPC13-208ENST00000505553 TRADDQ15628 312 aa3.65□□□□□ -1.83
TRAPPC13-208ENST00000505553 ACKR1Q16570 336 aa3.65□□□□□ -1.83
TRAPPC13-208ENST00000505553 CALCRLQ16602 461 aa3.65□□□□□ -1.83
TRAPPC13-208ENST00000505553 CA9Q16790 459 aa3.65□□□□□ -1.83
TRAPPC13-208ENST00000505553 UGT3A2Q3SY77 523 aa3.65□□□□□ -1.83
TRAPPC13-208ENST00000505553 Q4G0T1 1027 aa3.65□□□□□ -1.83
TRAPPC13-208ENST00000505553 TDRD12Q587J7 1177 aaKnown RBP3.65□□□□□ -1.83
TRAPPC13-208ENST00000505553 NDUFAF5Q5TEU4 345 aa3.65□□□□□ -1.83
TRAPPC13-208ENST00000505553 FAM166AQ6J272 317 aa3.65□□□□□ -1.83
TRAPPC13-208ENST00000505553 SHC4Q6S5L8 630 aa3.65□□□□□ -1.83
TRAPPC13-208ENST00000505553 PRSS55Q6UWB4 352 aaPredicted RBP3.65□□□□□ -1.83
TRAPPC13-208ENST00000505553 B3GLCTQ6Y288 498 aa3.65□□□□□ -1.83
TRAPPC13-208ENST00000505553 TMPRSS12Q86WS5 348 aa3.65□□□□□ -1.83
TRAPPC13-208ENST00000505553 TMEM126BQ8IUX1 230 aa3.65□□□□□ -1.83
TRAPPC13-208ENST00000505553 APCDD1Q8J025 514 aa3.65□□□□□ -1.83
TRAPPC13-208ENST00000505553 NPEPL1Q8NDH3 523 aa3.65□□□□□ -1.83
TRAPPC13-208ENST00000505553 OR4K1Q8NGD4 311 aa3.65□□□□□ -1.83
TRAPPC13-208ENST00000505553 OR52E1Q8NGJ3 308 aa3.65□□□□□ -1.83
TRAPPC13-208ENST00000505553 ABTB1Q969K4 478 aaPredicted RBP3.65□□□□□ -1.83
TRAPPC13-208ENST00000505553 PYCR2Q96C36 320 aa3.65□□□□□ -1.83
TRAPPC13-208ENST00000505553 TRIM44Q96DX7 344 aaPredicted RBP3.65□□□□□ -1.83
TRAPPC13-208ENST00000505553 C14orf79Q96F83 325 aa3.65□□□□□ -1.83
TRAPPC13-208ENST00000505553 FAM71F1Q96KD3 344 aaPredicted RBP3.65□□□□□ -1.83
TRAPPC13-208ENST00000505553 SGK494Q96LW2 274 aa3.65□□□□□ -1.83
TRAPPC13-208ENST00000505553 C3orf30Q96M34 536 aa3.65□□□□□ -1.83
TRAPPC13-208ENST00000505553 CTAGE1Q96RT6 745 aa3.65□□□□□ -1.83
TRAPPC13-208ENST00000505553 RASL10BQ96S79 203 aa3.65□□□□□ -1.83
TRAPPC13-208ENST00000505553 CSF3RQ99062 836 aa3.65□□□□□ -1.83
TRAPPC13-208ENST00000505553 ZNF559Q9BR84 538 aa3.65□□□□□ -1.83
TRAPPC13-208ENST00000505553 Q9H8V8 135 aa3.65□□□□□ -1.83
TRAPPC13-208ENST00000505553 GPN1Q9HCN4 374 aaPredicted RBP3.65□□□□□ -1.83
TRAPPC13-208ENST00000505553 TRNAU1APQ9NX07 287 aaKnown RBP3.65□□□□□ -1.83
TRAPPC13-208ENST00000505553 CNTNAP2Q9UHC6 1331 aa3.65□□□□□ -1.83
TRAPPC13-208ENST00000505553 TBK1Q9UHD2 729 aa3.65□□□□□ -1.83
TRAPPC13-208ENST00000505553 HEG1Q9ULI3 1381 aa3.65□□□□□ -1.83
TRAPPC13-208ENST00000505553 DUSP12Q9UNI6 340 aa3.65□□□□□ -1.83
TRAPPC13-208ENST00000505553 KCNJ14Q9UNX9 436 aa3.65□□□□□ -1.83
TRAPPC13-208ENST00000505553 KCNK6Q9Y257 313 aa3.65□□□□□ -1.83
TRAPPC13-208ENST00000505553 FOXA2Q9Y261 457 aaPredicted RBP3.65□□□□□ -1.83
TRAPPC13-208ENST00000505553 WDR83OSQ9Y284 106 aa3.65□□□□□ -1.83
TRAPPC13-208ENST00000505553 ZNF510Q9Y2H8 683 aa3.65□□□□□ -1.83
TRAPPC13-208ENST00000505553 FAM205AQ6ZU69 1335 aa3.64□□□□□ -1.83
TRAPPC13-208ENST00000505553 ZCWPW2A0A1B0GU75 182 aa3.64□□□□□ -1.83
TRAPPC13-208ENST00000505553 F8VVB4 439 aa3.64□□□□□ -1.83
TRAPPC13-208ENST00000505553 F8VWA3 439 aa3.64□□□□□ -1.83
TRAPPC13-208ENST00000505553 NPIPA3F8WFD2 350 aa3.64□□□□□ -1.83
TRAPPC13-208ENST00000505553 GAPDHSO14556 408 aaPredicted RBP3.64□□□□□ -1.83
TRAPPC13-208ENST00000505553 TEX28O15482 410 aa3.64□□□□□ -1.83
TRAPPC13-208ENST00000505553 ZNHIT1O43257 154 aa3.64□□□□□ -1.83
TRAPPC13-208ENST00000505553 WISP2O76076 250 aa3.64□□□□□ -1.83
TRAPPC13-208ENST00000505553 TFAP2AP05549 437 aa3.64□□□□□ -1.83
TRAPPC13-208ENST00000505553 KRT19P08727 400 aa3.64□□□□□ -1.83
TRAPPC13-208ENST00000505553 HSPA8P11142 646 aaKnown RBP3.64□□□□□ -1.83
TRAPPC13-208ENST00000505553 GM2AP17900 193 aa3.64□□□□□ -1.83
TRAPPC13-208ENST00000505553 NR1D1P20393 614 aa3.64□□□□□ -1.83
TRAPPC13-208ENST00000505553 RPA1P27694 616 aa3.64□□□□□ -1.83
TRAPPC13-208ENST00000505553 SSTR2P30874 369 aa3.64□□□□□ -1.83
TRAPPC13-208ENST00000505553 USP8P40818 1118 aa3.64□□□□□ -1.83
TRAPPC13-208ENST00000505553 ACAA2P42765 397 aaKnown RBP3.64□□□□□ -1.83
TRAPPC13-208ENST00000505553 GLIPR1P48060 266 aa3.64□□□□□ -1.83
TRAPPC13-208ENST00000505553 PEX5P50542 639 aa3.64□□□□□ -1.83
TRAPPC13-208ENST00000505553 CX3CL1P78423 397 aa3.64□□□□□ -1.83
TRAPPC13-208ENST00000505553 PRKCEQ02156 737 aa3.64□□□□□ -1.83
TRAPPC13-208ENST00000505553 LCP2Q13094 533 aa3.64□□□□□ -1.83
TRAPPC13-208ENST00000505553 DHX34Q14147 1143 aaKnown RBP3.64□□□□□ -1.83
TRAPPC13-208ENST00000505553 SRSF7Q16629 238 aaKnown RBP eCLIP3.64□□□□□ -1.83
TRAPPC13-208ENST00000505553 PHKG1Q16816 387 aa3.64□□□□□ -1.83
TRAPPC13-208ENST00000505553 WSCD2Q2TBF2 565 aa3.64□□□□□ -1.83
TRAPPC13-208ENST00000505553 XKR9Q5GH70 373 aa3.64□□□□□ -1.83
TRAPPC13-208ENST00000505553 CYP4A22Q5TCH4 519 aa3.64□□□□□ -1.83
TRAPPC13-208ENST00000505553 AGAP6Q5VW22 663 aa3.64□□□□□ -1.83
TRAPPC13-208ENST00000505553 LYSMD4Q5XG99 296 aa3.64□□□□□ -1.83
TRAPPC13-208ENST00000505553 PLXDC2Q6UX71 529 aa3.64□□□□□ -1.83
TRAPPC13-208ENST00000505553 PACS1Q6VY07 963 aa3.64□□□□□ -1.83
TRAPPC13-208ENST00000505553 GPR141Q7Z602 305 aa3.64□□□□□ -1.83
TRAPPC13-208ENST00000505553 TAF8Q7Z7C8 310 aa3.64□□□□□ -1.83
TRAPPC13-208ENST00000505553 PIP4P1Q86T03 277 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms