RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 PRICKLE3O43900 615 aaPredicted RBP15.33■□□□□ 0.04
PDLIM7-213ENST00000505074 GPC4O75487 556 aa15.33■□□□□ 0.04
PDLIM7-213ENST00000505074 AOAHP28039 575 aa15.33■□□□□ 0.04
PDLIM7-213ENST00000505074 GRIA3P42263 894 aa15.33■□□□□ 0.04
PDLIM7-213ENST00000505074 BDKRB1P46663 353 aa15.33■□□□□ 0.04
PDLIM7-213ENST00000505074 ARSFP54793 590 aa15.33■□□□□ 0.04
PDLIM7-213ENST00000505074 EIF3BP55884 814 aaKnown RBP15.33■□□□□ 0.04
PDLIM7-213ENST00000505074 ZC3H12BQ5HYM0 836 aaKnown RBP15.33■□□□□ 0.04
PDLIM7-213ENST00000505074 PRAMEF13Q5VWM6 474 aa15.33■□□□□ 0.04
PDLIM7-213ENST00000505074 RPUSD3Q6P087 351 aaKnown RBP15.33■□□□□ 0.04
PDLIM7-213ENST00000505074 CNSTQ6PJW8 725 aa15.33■□□□□ 0.04
PDLIM7-213ENST00000505074 FIGLAQ6QHK4 219 aa15.33■□□□□ 0.04
PDLIM7-213ENST00000505074 OTOAQ7RTW8 1153 aa15.33■□□□□ 0.04
PDLIM7-213ENST00000505074 TTC29Q8NA56 475 aaPredicted RBP15.33■□□□□ 0.04
PDLIM7-213ENST00000505074 OR2L8Q8NGY9 312 aa15.33■□□□□ 0.04
PDLIM7-213ENST00000505074 DENND1AQ8TEH3 1009 aa15.33■□□□□ 0.04
PDLIM7-213ENST00000505074 FOPNLQ96NB1 174 aa15.33■□□□□ 0.04
PDLIM7-213ENST00000505074 RAB11FIP5Q9BXF6 653 aa15.33■□□□□ 0.04
PDLIM7-213ENST00000505074 LZTFL1Q9NQ48 299 aa15.33■□□□□ 0.04
PDLIM7-213ENST00000505074 BFARQ9NZS9 450 aa15.33■□□□□ 0.04
PDLIM7-213ENST00000505074 CDC23Q9UJX2 597 aa15.33■□□□□ 0.04
PDLIM7-213ENST00000505074 RUVBL2Q9Y230 463 aaKnown RBP15.33■□□□□ 0.04
PDLIM7-213ENST00000505074 A0A1B0GX78 115 aa15.32■□□□□ 0.04
PDLIM7-213ENST00000505074 PCDH17O14917 1159 aa15.32■□□□□ 0.04
PDLIM7-213ENST00000505074 KPNA5O15131 536 aa15.32■□□□□ 0.04
PDLIM7-213ENST00000505074 PIM1P11309 404 aaPredicted RBP15.32■□□□□ 0.04
PDLIM7-213ENST00000505074 MCM3P25205 808 aa15.32■□□□□ 0.04
PDLIM7-213ENST00000505074 NMBRP28336 390 aa15.32■□□□□ 0.04
PDLIM7-213ENST00000505074 MEI1Q5TIA1 1274 aa15.32■□□□□ 0.04
PDLIM7-213ENST00000505074 METTL27Q8N6F8 245 aaPredicted RBP15.32■□□□□ 0.04
PDLIM7-213ENST00000505074 RAD51AP1Q96B01 352 aa15.32■□□□□ 0.04
PDLIM7-213ENST00000505074 NACC2Q96BF6 587 aa15.32■□□□□ 0.04
PDLIM7-213ENST00000505074 MIPEPQ99797 713 aa15.32■□□□□ 0.04
PDLIM7-213ENST00000505074 SELENOSQ9BQE4 189 aa15.32■□□□□ 0.04
PDLIM7-213ENST00000505074 IL22Q9GZX6 179 aa15.32■□□□□ 0.04
PDLIM7-213ENST00000505074 EIF2B3Q9NR50 452 aaKnown RBP15.32■□□□□ 0.04
PDLIM7-213ENST00000505074 MRFAP1Q9Y605 127 aa15.32■□□□□ 0.04
PDLIM7-213ENST00000505074 NFS1Q9Y697 457 aa15.32■□□□□ 0.04
PDLIM7-213ENST00000505074 AP3B1O00203 1094 aa15.31■□□□□ 0.04
PDLIM7-213ENST00000505074 PFDN6O15212 129 aa15.31■□□□□ 0.04
PDLIM7-213ENST00000505074 CNOT3O75175 753 aaKnown RBP15.31■□□□□ 0.04
PDLIM7-213ENST00000505074 SLCO2B1O94956 709 aa15.31■□□□□ 0.04
PDLIM7-213ENST00000505074 FGGP02679 453 aa15.31■□□□□ 0.04
PDLIM7-213ENST00000505074 MGAT1P26572 445 aa15.31■□□□□ 0.04
PDLIM7-213ENST00000505074 PSMB5P28074 263 aa15.31■□□□□ 0.04
PDLIM7-213ENST00000505074 NPY2RP49146 381 aa15.31■□□□□ 0.04
PDLIM7-213ENST00000505074 GRB7Q14451 532 aa15.31■□□□□ 0.04
PDLIM7-213ENST00000505074 GRM7Q14831 915 aa15.31■□□□□ 0.04
PDLIM7-213ENST00000505074 CCNG2Q16589 344 aa15.31■□□□□ 0.04
PDLIM7-213ENST00000505074 MRPL14Q6P1L8 145 aaKnown RBP15.31■□□□□ 0.04
PDLIM7-213ENST00000505074 XKRXQ6PP77 449 aa15.31■□□□□ 0.04
PDLIM7-213ENST00000505074 CES3Q6UWW8 571 aa15.31■□□□□ 0.04
PDLIM7-213ENST00000505074 GFRALQ6UXV0 394 aa15.31■□□□□ 0.04
PDLIM7-213ENST00000505074 C4orf22Q6V702 233 aa15.31■□□□□ 0.04
PDLIM7-213ENST00000505074 SHISA6Q6ZSJ9 500 aa15.31■□□□□ 0.04
PDLIM7-213ENST00000505074 SDCCAG8Q86SQ7 713 aaPredicted RBP15.31■□□□□ 0.04
PDLIM7-213ENST00000505074 LRRC6Q86X45 466 aa15.31■□□□□ 0.04
PDLIM7-213ENST00000505074 MPP5Q8N3R9 675 aa15.31■□□□□ 0.04
PDLIM7-213ENST00000505074 MAIP1Q8WWC4 291 aa15.31■□□□□ 0.04
PDLIM7-213ENST00000505074 FAM136AQ96C01 138 aa15.31■□□□□ 0.04
PDLIM7-213ENST00000505074 MAGEB10Q96LZ2 347 aaPredicted RBP15.31■□□□□ 0.04
PDLIM7-213ENST00000505074 MENTQ9BUN1 341 aa15.31■□□□□ 0.04
PDLIM7-213ENST00000505074 SLC6A20Q9NP91 592 aa15.31■□□□□ 0.04
PDLIM7-213ENST00000505074 CUTCQ9NTM9 273 aa15.31■□□□□ 0.04
PDLIM7-213ENST00000505074 SYBUQ9NX95 663 aa15.31■□□□□ 0.04
PDLIM7-213ENST00000505074 FBXL4Q9UKA2 621 aa15.31■□□□□ 0.04
PDLIM7-213ENST00000505074 FAM169AQ9Y6X4 670 aa15.31■□□□□ 0.04
PDLIM7-213ENST00000505074 KRT87PA6NCN2 255 aa15.3■□□□□ 0.04
PDLIM7-213ENST00000505074 GOLGA8KD6RF30 607 aa15.3■□□□□ 0.04
PDLIM7-213ENST00000505074 GOLGA8TH3BQL2 631 aa15.3■□□□□ 0.04
PDLIM7-213ENST00000505074 DSCR3O14972 297 aa15.3■□□□□ 0.04
PDLIM7-213ENST00000505074 ALOX12BO75342 701 aa15.3■□□□□ 0.04
PDLIM7-213ENST00000505074 VAPBO95292 243 aa15.3■□□□□ 0.04
PDLIM7-213ENST00000505074 UMODP07911 640 aa15.3■□□□□ 0.04
PDLIM7-213ENST00000505074 CD1EP15812 388 aa15.3■□□□□ 0.04
PDLIM7-213ENST00000505074 FMO4P31512 558 aa15.3■□□□□ 0.04
PDLIM7-213ENST00000505074 KCNJ1P48048 391 aa15.3■□□□□ 0.04
PDLIM7-213ENST00000505074 TDGF1P3P51864 188 aa15.3■□□□□ 0.04
PDLIM7-213ENST00000505074 VSX2P58304 361 aaPredicted RBP15.3■□□□□ 0.04
PDLIM7-213ENST00000505074 KRTAP10-9P60411 292 aa15.3■□□□□ 0.04
PDLIM7-213ENST00000505074 TSTA3Q13630 321 aaPredicted RBP15.3■□□□□ 0.04
PDLIM7-213ENST00000505074 KCTD19Q17RG1 926 aaPredicted RBP15.3■□□□□ 0.04
PDLIM7-213ENST00000505074 TCTE1Q5JU00 501 aa15.3■□□□□ 0.04
PDLIM7-213ENST00000505074 ZNF324BQ6AW86 544 aaPredicted RBP15.3■□□□□ 0.04
PDLIM7-213ENST00000505074 MRNIPQ6NTE8 343 aa15.3■□□□□ 0.04
PDLIM7-213ENST00000505074 TMEM207Q6UWW9 146 aa15.3■□□□□ 0.04
PDLIM7-213ENST00000505074 MAGEC3Q8TD91 643 aa15.3■□□□□ 0.04
PDLIM7-213ENST00000505074 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.3■□□□□ 0.04
PDLIM7-213ENST00000505074 NR4A3Q92570 626 aa15.3■□□□□ 0.04
PDLIM7-213ENST00000505074 FKBP10Q96AY3 582 aa15.3■□□□□ 0.04
PDLIM7-213ENST00000505074 LHPPQ9H008 270 aa15.3■□□□□ 0.04
PDLIM7-213ENST00000505074 P2RY12Q9H244 342 aa15.3■□□□□ 0.04
PDLIM7-213ENST00000505074 SOX17Q9H6I2 414 aaPredicted RBP15.3■□□□□ 0.04
PDLIM7-213ENST00000505074 TREX1Q9NSU2 369 aa15.3■□□□□ 0.04
PDLIM7-213ENST00000505074 CEP104O60308 925 aa15.29■□□□□ 0.04
PDLIM7-213ENST00000505074 C1orf105O95561 183 aa15.29■□□□□ 0.04
PDLIM7-213ENST00000505074 EIF2S1P05198 315 aaKnown RBP15.29■□□□□ 0.04
PDLIM7-213ENST00000505074 ERVK-10P10266 1014 aa15.29■□□□□ 0.04
PDLIM7-213ENST00000505074 RPS3P23396 243 aaKnown RBP eCLIP15.29■□□□□ 0.04
PDLIM7-213ENST00000505074 MMP11P24347 488 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms