RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 LUZP1Q86V48 1076 aa6.56□□□□□ -1.36
NPIPB3-203ENST00000504841 VRK3Q8IV63 474 aa6.56□□□□□ -1.36
NPIPB3-203ENST00000504841 CDKL3Q8IVW4 592 aaPredicted RBP6.56□□□□□ -1.36
NPIPB3-203ENST00000504841 DCUN1D3Q8IWE4 304 aa6.56□□□□□ -1.36
NPIPB3-203ENST00000504841 RHOT2Q8IXI1 618 aa6.56□□□□□ -1.36
NPIPB3-203ENST00000504841 OR4N4Q8N0Y3 316 aa6.56□□□□□ -1.36
NPIPB3-203ENST00000504841 MMP21Q8N119 569 aa6.56□□□□□ -1.36
NPIPB3-203ENST00000504841 TAB3Q8N5C8 712 aaPredicted RBP6.56□□□□□ -1.36
NPIPB3-203ENST00000504841 DNAJB8Q8NHS0 232 aa6.56□□□□□ -1.36
NPIPB3-203ENST00000504841 LKAAEAR1Q8TD35 194 aa6.56□□□□□ -1.36
NPIPB3-203ENST00000504841 SKA2Q8WVK7 121 aaPredicted RBP6.56□□□□□ -1.36
NPIPB3-203ENST00000504841 SLC22A18Q96BI1 424 aa6.56□□□□□ -1.36
NPIPB3-203ENST00000504841 SDCCAG3Q96C92 435 aa6.56□□□□□ -1.36
NPIPB3-203ENST00000504841 C14orf79Q96F83 325 aa6.56□□□□□ -1.36
NPIPB3-203ENST00000504841 CDKN2AIPNLQ96HQ2 116 aa6.56□□□□□ -1.36
NPIPB3-203ENST00000504841 GBP4Q96PP9 640 aa6.56□□□□□ -1.36
NPIPB3-203ENST00000504841 ALS2CR12Q96Q35 445 aa6.56□□□□□ -1.36
NPIPB3-203ENST00000504841 FERMT1Q9BQL6 677 aa6.56□□□□□ -1.36
NPIPB3-203ENST00000504841 HES7Q9BYE0 225 aa6.56□□□□□ -1.36
NPIPB3-203ENST00000504841 SLC24A3Q9HC58 644 aa6.56□□□□□ -1.36
NPIPB3-203ENST00000504841 MCCC2Q9HCC0 563 aa6.56□□□□□ -1.36
NPIPB3-203ENST00000504841 GPAMQ9HCL2 828 aa6.56□□□□□ -1.36
NPIPB3-203ENST00000504841 LUC7LQ9NQ29 371 aaKnown RBP6.56□□□□□ -1.36
NPIPB3-203ENST00000504841 NLE1Q9NVX2 485 aaPredicted RBP6.56□□□□□ -1.36
NPIPB3-203ENST00000504841 IL1RAPL1Q9NZN1 696 aa6.56□□□□□ -1.36
NPIPB3-203ENST00000504841 NPIPA1Q9UND3 350 aa6.56□□□□□ -1.36
NPIPB3-203ENST00000504841 MEMO1Q9Y316 297 aa6.56□□□□□ -1.36
NPIPB3-203ENST00000504841 PCDHGB6Q9Y5F9 930 aa6.56□□□□□ -1.36
NPIPB3-203ENST00000504841 PCNX1Q96RV3 2341 aa6.56□□□□□ -1.36
NPIPB3-203ENST00000504841 APCP25054 2843 aa6.56□□□□□ -1.36
NPIPB3-203ENST00000504841 CACNA1CQ13936 2221 aa6.56□□□□□ -1.36
NPIPB3-203ENST00000504841 IGHV3-20A0A0C4DH32 117 aa6.55□□□□□ -1.36
NPIPB3-203ENST00000504841 CCDC162PA2VCL2 907 aa6.55□□□□□ -1.36
NPIPB3-203ENST00000504841 FITM1A5D6W6 292 aa6.55□□□□□ -1.36
NPIPB3-203ENST00000504841 FAM90A27PA6NNH2 459 aa6.55□□□□□ -1.36
NPIPB3-203ENST00000504841 IQCF5A8MTL0 148 aa6.55□□□□□ -1.36
NPIPB3-203ENST00000504841 GOLGA6L22H0YM25 854 aa6.55□□□□□ -1.36
NPIPB3-203ENST00000504841 H7C0S8 307 aa6.55□□□□□ -1.36
NPIPB3-203ENST00000504841 QSOX1O00391 747 aa6.55□□□□□ -1.36
NPIPB3-203ENST00000504841 RASGRF2O14827 1237 aa6.55□□□□□ -1.36
NPIPB3-203ENST00000504841 TTI1O43156 1089 aa6.55□□□□□ -1.36
NPIPB3-203ENST00000504841 OR1I1O60431 355 aa6.55□□□□□ -1.36
NPIPB3-203ENST00000504841 SRPX2O60687 465 aaPredicted RBP6.55□□□□□ -1.36
NPIPB3-203ENST00000504841 ZRANB2O95218 330 aaKnown RBP eCLIP6.55□□□□□ -1.36
NPIPB3-203ENST00000504841 MLYCDO95822 493 aa6.55□□□□□ -1.36
NPIPB3-203ENST00000504841 MBD3O95983 291 aa6.55□□□□□ -1.36
NPIPB3-203ENST00000504841 RPN2P04844 631 aa6.55□□□□□ -1.36
NPIPB3-203ENST00000504841 OR56A5P0C7T3 313 aa6.55□□□□□ -1.36
NPIPB3-203ENST00000504841 MYBL2P10244 700 aa6.55□□□□□ -1.36
NPIPB3-203ENST00000504841 CD46P15529 392 aa6.55□□□□□ -1.36
NPIPB3-203ENST00000504841 CD1EP15812 388 aa6.55□□□□□ -1.36
NPIPB3-203ENST00000504841 AGAP20933 346 aa6.55□□□□□ -1.36
NPIPB3-203ENST00000504841 CCR7P32248 378 aa6.55□□□□□ -1.36
NPIPB3-203ENST00000504841 EIF3EP60228 445 aaKnown RBP6.55□□□□□ -1.36
NPIPB3-203ENST00000504841 MAT1AQ00266 395 aaKnown RBP6.55□□□□□ -1.36
NPIPB3-203ENST00000504841 TSTA3Q13630 321 aaPredicted RBP6.55□□□□□ -1.36
NPIPB3-203ENST00000504841 ITIH4Q14624 930 aa6.55□□□□□ -1.36
NPIPB3-203ENST00000504841 IQCB1Q15051 598 aa6.55□□□□□ -1.36
NPIPB3-203ENST00000504841 PCOLCEQ15113 449 aa6.55□□□□□ -1.36
NPIPB3-203ENST00000504841 TAZQ16635 292 aa6.55□□□□□ -1.36
NPIPB3-203ENST00000504841 SYT16Q17RD7 645 aa6.55□□□□□ -1.36
NPIPB3-203ENST00000504841 PRMT9Q6P2P2 845 aa6.55□□□□□ -1.36
NPIPB3-203ENST00000504841 DARS2Q6PI48 645 aaKnown RBP6.55□□□□□ -1.36
NPIPB3-203ENST00000504841 RIPOR1Q6ZS17 1223 aa6.55□□□□□ -1.36
NPIPB3-203ENST00000504841 TMEM200AQ86VY9 491 aa6.55□□□□□ -1.36
NPIPB3-203ENST00000504841 SPPL2CQ8IUH8 684 aa6.55□□□□□ -1.36
NPIPB3-203ENST00000504841 SLC22A15Q8IZD6 547 aa6.55□□□□□ -1.36
NPIPB3-203ENST00000504841 KRT222Q8N1A0 295 aa6.55□□□□□ -1.36
NPIPB3-203ENST00000504841 BEST3Q8N1M1 668 aa6.55□□□□□ -1.36
NPIPB3-203ENST00000504841 OR2L8Q8NGY9 312 aa6.55□□□□□ -1.36
NPIPB3-203ENST00000504841 ACTL9Q8TC94 416 aa6.55□□□□□ -1.36
NPIPB3-203ENST00000504841 ADAMTS18Q8TE60 1221 aa6.55□□□□□ -1.36
NPIPB3-203ENST00000504841 AGAP11Q8TF27 550 aa6.55□□□□□ -1.36
NPIPB3-203ENST00000504841 CA5BP1Q8WTZ4 195 aa6.55□□□□□ -1.36
NPIPB3-203ENST00000504841 NRGNQ92686 78 aa6.55□□□□□ -1.36
NPIPB3-203ENST00000504841 LRRC45Q96CN5 670 aa6.55□□□□□ -1.36
NPIPB3-203ENST00000504841 IQCDQ96DY2 449 aa6.55□□□□□ -1.36
NPIPB3-203ENST00000504841 MMABQ96EY8 250 aaPredicted RBP6.55□□□□□ -1.36
NPIPB3-203ENST00000504841 C10orf90Q96M02 699 aa6.55□□□□□ -1.36
NPIPB3-203ENST00000504841 GPR137Q96N19 417 aa6.55□□□□□ -1.36
NPIPB3-203ENST00000504841 SPATA13Q96N96 652 aa6.55□□□□□ -1.36
NPIPB3-203ENST00000504841 ZNF285Q96NJ3 590 aa6.55□□□□□ -1.36
NPIPB3-203ENST00000504841 MENTQ9BUN1 341 aa6.55□□□□□ -1.36
NPIPB3-203ENST00000504841 RNF32Q9H0A6 362 aa6.55□□□□□ -1.36
NPIPB3-203ENST00000504841 C14orf105Q9NVL8 296 aa6.55□□□□□ -1.36
NPIPB3-203ENST00000504841 ZNHIT6Q9NWK9 470 aaKnown RBP6.55□□□□□ -1.36
NPIPB3-203ENST00000504841 STMN3Q9NZ72 180 aa6.55□□□□□ -1.36
NPIPB3-203ENST00000504841 IFNKQ9P0W0 207 aa6.55□□□□□ -1.36
NPIPB3-203ENST00000504841 TEKT2Q9UIF3 430 aa6.55□□□□□ -1.36
NPIPB3-203ENST00000504841 MKL2Q9ULH7 1088 aa6.55□□□□□ -1.36
NPIPB3-203ENST00000504841 PPT2Q9UMR5 302 aa6.55□□□□□ -1.36
NPIPB3-203ENST00000504841 RUVBL2Q9Y230 463 aaKnown RBP6.55□□□□□ -1.36
NPIPB3-203ENST00000504841 PDZD2O15018 2839 aa6.55□□□□□ -1.36
NPIPB3-203ENST00000504841 NCOA6Q14686 2063 aaPredicted RBP6.54□□□□□ -1.36
NPIPB3-203ENST00000504841 CPAMD8Q8IZJ3 1885 aa6.54□□□□□ -1.36
NPIPB3-203ENST00000504841 IGLV3-12A0A075B6K2 115 aa6.54□□□□□ -1.36
NPIPB3-203ENST00000504841 A0A0A6YYC8 382 aaPredicted RBP6.54□□□□□ -1.36
NPIPB3-203ENST00000504841 F8W8V4 182 aa6.54□□□□□ -1.36
NPIPB3-203ENST00000504841 GOLGA6L19H0YKK7 550 aa6.54□□□□□ -1.36
NPIPB3-203ENST00000504841 I3L1I5 382 aaPredicted RBP6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms