RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 MOSPD2Q8NHP6 518 aa5.3□□□□□ -1.56
NIPBL-203ENST00000503274 ZNF501Q96CX3 271 aaPredicted RBP5.3□□□□□ -1.56
NIPBL-203ENST00000503274 SGK494Q96LW2 274 aa5.3□□□□□ -1.56
NIPBL-203ENST00000503274 F2RL3Q96RI0 385 aa5.3□□□□□ -1.56
NIPBL-203ENST00000503274 ACKR4Q9NPB9 350 aa5.3□□□□□ -1.56
NIPBL-203ENST00000503274 ECHDC1Q9NTX5 307 aa5.3□□□□□ -1.56
NIPBL-203ENST00000503274 ADPRHL2Q9NX46 363 aa5.3□□□□□ -1.56
NIPBL-203ENST00000503274 COQ3Q9NZJ6 369 aa5.3□□□□□ -1.56
NIPBL-203ENST00000503274 SLC7A7Q9UM01 511 aa5.3□□□□□ -1.56
NIPBL-203ENST00000503274 GAB2Q9UQC2 676 aa5.3□□□□□ -1.56
NIPBL-203ENST00000503274 LRRC37AA6NMS7 1700 aa5.3□□□□□ -1.56
NIPBL-203ENST00000503274 LTBP1Q14766 1721 aa5.3□□□□□ -1.56
NIPBL-203ENST00000503274 DDX60Q8IY21 1712 aaKnown RBP5.3□□□□□ -1.56
NIPBL-203ENST00000503274 TCF20Q9UGU0 1960 aaKnown RBP5.29□□□□□ -1.56
NIPBL-203ENST00000503274 FANCIQ9NVI1 1328 aa5.29□□□□□ -1.56
NIPBL-203ENST00000503274 BLOC1S5-TXNDC5H3BN57 136 aa5.29□□□□□ -1.56
NIPBL-203ENST00000503274 TSPAN1O60635 241 aa5.29□□□□□ -1.56
NIPBL-203ENST00000503274 MED24O75448 989 aa5.29□□□□□ -1.56
NIPBL-203ENST00000503274 ERAL1O75616 437 aaKnown RBP5.29□□□□□ -1.56
NIPBL-203ENST00000503274 CSPG5O95196 566 aa5.29□□□□□ -1.56
NIPBL-203ENST00000503274 CFC1BP0CG36 223 aa5.29□□□□□ -1.56
NIPBL-203ENST00000503274 CFC1P0CG37 223 aa5.29□□□□□ -1.56
NIPBL-203ENST00000503274 NR2F1P10589 423 aa5.29□□□□□ -1.56
NIPBL-203ENST00000503274 TUBB4BP68371 445 aa5.29□□□□□ -1.56
NIPBL-203ENST00000503274 IFI35P80217 286 aaPredicted RBP5.29□□□□□ -1.56
NIPBL-203ENST00000503274 RBM39Q14498 530 aaKnown RBP5.29□□□□□ -1.56
NIPBL-203ENST00000503274 MDH1BQ5I0G3 518 aa5.29□□□□□ -1.56
NIPBL-203ENST00000503274 OTUD3Q5T2D3 398 aaPredicted RBP5.29□□□□□ -1.56
NIPBL-203ENST00000503274 CFAP58Q5T655 872 aa5.29□□□□□ -1.56
NIPBL-203ENST00000503274 ENOSF1Q7L5Y1 443 aa5.29□□□□□ -1.56
NIPBL-203ENST00000503274 G2E3Q7L622 706 aa5.29□□□□□ -1.56
NIPBL-203ENST00000503274 APOBEC3FQ8IUX4 373 aaKnown RBP5.29□□□□□ -1.56
NIPBL-203ENST00000503274 FOXP4Q8IVH2 680 aaPredicted RBP5.29□□□□□ -1.56
NIPBL-203ENST00000503274 FAM9BQ8IZU0 186 aa5.29□□□□□ -1.56
NIPBL-203ENST00000503274 SLC47A1Q96FL8 570 aa5.29□□□□□ -1.56
NIPBL-203ENST00000503274 GCNAQ96QF7 691 aa5.29□□□□□ -1.56
NIPBL-203ENST00000503274 RHNO1Q9BSD3 238 aa5.29□□□□□ -1.56
NIPBL-203ENST00000503274 FNDC11Q9BVV2 318 aa5.29□□□□□ -1.56
NIPBL-203ENST00000503274 DPAGT1Q9H3H5 408 aa5.29□□□□□ -1.56
NIPBL-203ENST00000503274 OSER1Q9NX31 292 aa5.29□□□□□ -1.56
NIPBL-203ENST00000503274 CPSF2Q9P2I0 782 aaKnown RBP5.29□□□□□ -1.56
NIPBL-203ENST00000503274 PPIEQ9UNP9 301 aaKnown RBP5.29□□□□□ -1.56
NIPBL-203ENST00000503274 GRIP1Q9Y3R0 1128 aa5.29□□□□□ -1.56
NIPBL-203ENST00000503274 ZNF609O15014 1411 aa5.29□□□□□ -1.56
NIPBL-203ENST00000503274 DUOX1Q9NRD9 1551 aa5.29□□□□□ -1.56
NIPBL-203ENST00000503274 A0A1W2PRB8 838 aa5.28□□□□□ -1.56
NIPBL-203ENST00000503274 HMGB1P1B2RPK0 211 aaPredicted RBP5.28□□□□□ -1.56
NIPBL-203ENST00000503274 CLIC2O15247 247 aa5.28□□□□□ -1.56
NIPBL-203ENST00000503274 IPO8O15397 1037 aaKnown RBP5.28□□□□□ -1.56
NIPBL-203ENST00000503274 ADAM20O43506 726 aa5.28□□□□□ -1.56
NIPBL-203ENST00000503274 ERVK-10P10266 1014 aa5.28□□□□□ -1.56
NIPBL-203ENST00000503274 LIFP15018 202 aa5.28□□□□□ -1.56
NIPBL-203ENST00000503274 CCDC184Q52MB2 194 aa5.28□□□□□ -1.56
NIPBL-203ENST00000503274 GARNL3Q5VVW2 1013 aa5.28□□□□□ -1.56
NIPBL-203ENST00000503274 TMEM211Q6ICI0 200 aa5.28□□□□□ -1.56
NIPBL-203ENST00000503274 KRTAP5-11Q6L8G4 156 aa5.28□□□□□ -1.56
NIPBL-203ENST00000503274 TMEM173Q86WV6 379 aaPredicted RBP5.28□□□□□ -1.56
NIPBL-203ENST00000503274 FAM114A1Q8IWE2 563 aa5.28□□□□□ -1.56
NIPBL-203ENST00000503274 RNF128Q8TEB7 428 aa5.28□□□□□ -1.56
NIPBL-203ENST00000503274 PTERQ96BW5 349 aa5.28□□□□□ -1.56
NIPBL-203ENST00000503274 MYADMQ96S97 322 aa5.28□□□□□ -1.56
NIPBL-203ENST00000503274 ABHD1Q96SE0 405 aa5.28□□□□□ -1.56
NIPBL-203ENST00000503274 RTP3Q9BQQ7 232 aa5.28□□□□□ -1.56
NIPBL-203ENST00000503274 TRAF4Q9BUZ4 470 aaPredicted RBP5.28□□□□□ -1.56
NIPBL-203ENST00000503274 GDE1Q9NZC3 331 aa5.28□□□□□ -1.56
NIPBL-203ENST00000503274 MAGED1Q9Y5V3 778 aaPredicted RBP5.28□□□□□ -1.56
NIPBL-203ENST00000503274 MYH3P11055 1940 aa5.28□□□□□ -1.56
NIPBL-203ENST00000503274 GREB1LQ9C091 1923 aaPredicted RBP5.27□□□□□ -1.57
NIPBL-203ENST00000503274 ANKUB1A6NFN9 424 aa5.27□□□□□ -1.57
NIPBL-203ENST00000503274 SH2B2O14492 632 aaPredicted RBP5.27□□□□□ -1.57
NIPBL-203ENST00000503274 HOXC8P31273 242 aa5.27□□□□□ -1.57
NIPBL-203ENST00000503274 LIG4P49917 911 aa5.27□□□□□ -1.57
NIPBL-203ENST00000503274 CDH11P55287 796 aa5.27□□□□□ -1.57
NIPBL-203ENST00000503274 CDH13P55290 713 aa5.27□□□□□ -1.57
NIPBL-203ENST00000503274 FKBP1AP62942 108 aaKnown RBP5.27□□□□□ -1.57
NIPBL-203ENST00000503274 BMP2KLQ5H9B9 411 aa5.27□□□□□ -1.57
NIPBL-203ENST00000503274 BEND3Q5T5X7 828 aa5.27□□□□□ -1.57
NIPBL-203ENST00000503274 CORO6Q6QEF8 472 aa5.27□□□□□ -1.57
NIPBL-203ENST00000503274 C15orf52Q6ZUT6 534 aaKnown RBP5.27□□□□□ -1.57
NIPBL-203ENST00000503274 ZNF554Q86TJ5 538 aa5.27□□□□□ -1.57
NIPBL-203ENST00000503274 OR5M8Q8NGP6 311 aa5.27□□□□□ -1.57
NIPBL-203ENST00000503274 EXD1Q8NHP7 514 aa5.27□□□□□ -1.57
NIPBL-203ENST00000503274 FAM76AQ8TAV0 307 aa5.27□□□□□ -1.57
NIPBL-203ENST00000503274 MS4A10Q96PG2 267 aa5.27□□□□□ -1.57
NIPBL-203ENST00000503274 OLFM1Q99784 485 aa5.27□□□□□ -1.57
NIPBL-203ENST00000503274 BTBD10Q9BSF8 475 aa5.27□□□□□ -1.57
NIPBL-203ENST00000503274 LMF2Q9BU23 707 aaKnown RBP5.27□□□□□ -1.57
NIPBL-203ENST00000503274 APOL6Q9BWW8 343 aa5.27□□□□□ -1.57
NIPBL-203ENST00000503274 KLHL4Q9C0H6 718 aa5.27□□□□□ -1.57
NIPBL-203ENST00000503274 VN1R1Q9GZP7 353 aa5.27□□□□□ -1.57
NIPBL-203ENST00000503274 CD209Q9NNX6 404 aa5.27□□□□□ -1.57
NIPBL-203ENST00000503274 SLC35C2Q9NQQ7 365 aa5.27□□□□□ -1.57
NIPBL-203ENST00000503274 MDFICQ9P1T7 246 aa5.27□□□□□ -1.57
NIPBL-203ENST00000503274 CRNNQ9UBG3 495 aaPredicted RBP5.27□□□□□ -1.57
NIPBL-203ENST00000503274 MORF4L1Q9UBU8 362 aa5.27□□□□□ -1.57
NIPBL-203ENST00000503274 C2CD2Q9Y426 696 aa5.27□□□□□ -1.57
NIPBL-203ENST00000503274 NME7Q9Y5B8 376 aa5.27□□□□□ -1.57
NIPBL-203ENST00000503274 SCN9AQ15858 1988 aa5.26□□□□□ -1.57
NIPBL-203ENST00000503274 CASP8AP2Q9UKL3 1982 aa5.26□□□□□ -1.57
NIPBL-203ENST00000503274 HYKKA2RU49 373 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms