RNA–Protein interactions for RNA: ENST00000502987.5

SNCA-207, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 731 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-207ENST00000502987 ACAT2Q9BWD1 397 aa10.27□□□□□ -0.77
SNCA-207ENST00000502987 ZBTB20Q9HC78 741 aaPredicted RBP10.27□□□□□ -0.77
SNCA-207ENST00000502987 SLC6A20Q9NP91 592 aa10.27□□□□□ -0.77
SNCA-207ENST00000502987 AGPAT4Q9NRZ5 378 aa10.27□□□□□ -0.77
SNCA-207ENST00000502987 SLC22A11Q9NSA0 550 aa10.27□□□□□ -0.77
SNCA-207ENST00000502987 ABCF3Q9NUQ8 709 aa10.27□□□□□ -0.77
SNCA-207ENST00000502987 IL1RAPL1Q9NZN1 696 aa10.27□□□□□ -0.77
SNCA-207ENST00000502987 NXT1Q9UKK6 140 aaKnown RBP10.27□□□□□ -0.77
SNCA-207ENST00000502987 DRG1Q9Y295 367 aaKnown RBP10.27□□□□□ -0.77
SNCA-207ENST00000502987 CELSR2Q9HCU4 2923 aa10.26□□□□□ -0.77
SNCA-207ENST00000502987 NBPF19A0A087WUL8 3843 aa10.26□□□□□ -0.77
SNCA-207ENST00000502987 HYKKA2RU49 373 aa10.26□□□□□ -0.77
SNCA-207ENST00000502987 GOLGA8KD6RF30 607 aa10.26□□□□□ -0.77
SNCA-207ENST00000502987 E5RI56 91 aa10.26□□□□□ -0.77
SNCA-207ENST00000502987 GOLGA8TH3BQL2 631 aa10.26□□□□□ -0.77
SNCA-207ENST00000502987 FKBP9O95302 570 aa10.26□□□□□ -0.77
SNCA-207ENST00000502987 CBX6O95503 412 aa10.26□□□□□ -0.77
SNCA-207ENST00000502987 C1orf105O95561 183 aa10.26□□□□□ -0.77
SNCA-207ENST00000502987 MGAT1P26572 445 aa10.26□□□□□ -0.77
SNCA-207ENST00000502987 CMPK1P30085 196 aa10.26□□□□□ -0.77
SNCA-207ENST00000502987 CDC25BP30305 580 aa10.26□□□□□ -0.77
SNCA-207ENST00000502987 KCNJ1P48048 391 aa10.26□□□□□ -0.77
SNCA-207ENST00000502987 SOX8P57073 446 aa10.26□□□□□ -0.77
SNCA-207ENST00000502987 SARNPP82979 210 aaKnown RBP10.26□□□□□ -0.77
SNCA-207ENST00000502987 TUBB8Q3ZCM7 444 aa10.26□□□□□ -0.77
SNCA-207ENST00000502987 CCSMST1Q4G0I0 132 aa10.26□□□□□ -0.77
SNCA-207ENST00000502987 CASC4Q6P4E1 433 aa10.26□□□□□ -0.77
SNCA-207ENST00000502987 IGFL3Q6UXB1 125 aa10.26□□□□□ -0.77
SNCA-207ENST00000502987 GAS2L3Q86XJ1 694 aa10.26□□□□□ -0.77
SNCA-207ENST00000502987 MPP5Q8N3R9 675 aa10.26□□□□□ -0.77
SNCA-207ENST00000502987 NACC2Q96BF6 587 aa10.26□□□□□ -0.77
SNCA-207ENST00000502987 MIEF2Q96C03 454 aa10.26□□□□□ -0.77
SNCA-207ENST00000502987 THOC3Q96J01 351 aaKnown RBP10.26□□□□□ -0.77
SNCA-207ENST00000502987 C5orf34Q96MH7 638 aa10.26□□□□□ -0.77
SNCA-207ENST00000502987 CRB3Q9BUF7 120 aa10.26□□□□□ -0.77
SNCA-207ENST00000502987 MENTQ9BUN1 341 aa10.26□□□□□ -0.77
SNCA-207ENST00000502987 P2RY12Q9H244 342 aa10.26□□□□□ -0.77
SNCA-207ENST00000502987 EPS8L2Q9H6S3 715 aa10.26□□□□□ -0.77
SNCA-207ENST00000502987 WDR54Q9H977 334 aa10.26□□□□□ -0.77
SNCA-207ENST00000502987 MRM3Q9HC36 420 aaKnown RBP10.26□□□□□ -0.77
SNCA-207ENST00000502987 ZNF304Q9HCX3 659 aa10.26□□□□□ -0.77
SNCA-207ENST00000502987 LZTFL1Q9NQ48 299 aa10.26□□□□□ -0.77
SNCA-207ENST00000502987 SEMA3GQ9NS98 782 aa10.26□□□□□ -0.77
SNCA-207ENST00000502987 STOX2Q9P2F5 926 aaPredicted RBP10.26□□□□□ -0.77
SNCA-207ENST00000502987 CTSFQ9UBX1 484 aa10.26□□□□□ -0.77
SNCA-207ENST00000502987 CRYL1Q9Y2S2 319 aa10.26□□□□□ -0.77
SNCA-207ENST00000502987 CACNA1DQ01668 2161 aa10.25□□□□□ -0.77
SNCA-207ENST00000502987 HIVEP3Q5T1R4 2406 aa10.25□□□□□ -0.77
SNCA-207ENST00000502987 LOC105369274A0A096LPK9 316 aa10.25□□□□□ -0.77
SNCA-207ENST00000502987 LOC102723532A0A0G2JNH3 316 aa10.25□□□□□ -0.77
SNCA-207ENST00000502987 H3BMM5 538 aa10.25□□□□□ -0.77
SNCA-207ENST00000502987 SOCS6O14544 535 aa10.25□□□□□ -0.77
SNCA-207ENST00000502987 CEP104O60308 925 aa10.25□□□□□ -0.77
SNCA-207ENST00000502987 CTSVO60911 334 aa10.25□□□□□ -0.77
SNCA-207ENST00000502987 NIPSNAP2O75323 286 aa10.25□□□□□ -0.77
SNCA-207ENST00000502987 FGGP02679 453 aa10.25□□□□□ -0.77
SNCA-207ENST00000502987 RNF224P0DH78 156 aa10.25□□□□□ -0.77
SNCA-207ENST00000502987 FBLP22087 321 aaKnown RBP10.25□□□□□ -0.77
SNCA-207ENST00000502987 RPS3P23396 243 aaKnown RBP eCLIP10.25□□□□□ -0.77
SNCA-207ENST00000502987 RPA3P35244 121 aaPredicted RBP10.25□□□□□ -0.77
SNCA-207ENST00000502987 VPS41P49754 854 aa10.25□□□□□ -0.77
SNCA-207ENST00000502987 CDC16Q13042 620 aa10.25□□□□□ -0.77
SNCA-207ENST00000502987 TRIP13Q15645 432 aaPredicted RBP10.25□□□□□ -0.77
SNCA-207ENST00000502987 MUM1Q2TAK8 710 aa10.25□□□□□ -0.77
SNCA-207ENST00000502987 ANKRD20A4Q4UJ75 823 aa10.25□□□□□ -0.77
SNCA-207ENST00000502987 RNF187Q5TA31 235 aaPredicted RBP10.25□□□□□ -0.77
SNCA-207ENST00000502987 FRMPD2BQ6IN97 320 aa10.25□□□□□ -0.77
SNCA-207ENST00000502987 SUSD1Q6UWL2 747 aa10.25□□□□□ -0.77
SNCA-207ENST00000502987 KIRREL2Q6UWL6 708 aa10.25□□□□□ -0.77
SNCA-207ENST00000502987 LINC00696Q6ZRV3 163 aa10.25□□□□□ -0.77
SNCA-207ENST00000502987 Q6ZS92 163 aa10.25□□□□□ -0.77
SNCA-207ENST00000502987 COX15Q7KZN9 410 aa10.25□□□□□ -0.77
SNCA-207ENST00000502987 CUZD1Q86UP6 607 aa10.25□□□□□ -0.77
SNCA-207ENST00000502987 OR4N4Q8N0Y3 316 aa10.25□□□□□ -0.77
SNCA-207ENST00000502987 DTWD1Q8N5C7 304 aa10.25□□□□□ -0.77
SNCA-207ENST00000502987 OR2L3Q8NG85 312 aa10.25□□□□□ -0.77
SNCA-207ENST00000502987 INPP5DQ92835 1189 aa10.25□□□□□ -0.77
SNCA-207ENST00000502987 MFSD3Q96ES6 412 aa10.25□□□□□ -0.77
SNCA-207ENST00000502987 CABS1Q96KC9 395 aa10.25□□□□□ -0.77
SNCA-207ENST00000502987 WDR77Q9BQA1 342 aaPredicted RBP10.25□□□□□ -0.77
SNCA-207ENST00000502987 DPH7Q9BTV6 452 aa10.25□□□□□ -0.77
SNCA-207ENST00000502987 LHPPQ9H008 270 aa10.25□□□□□ -0.77
SNCA-207ENST00000502987 SLC26A1Q9H2B4 701 aa10.25□□□□□ -0.77
SNCA-207ENST00000502987 EIF2B3Q9NR50 452 aaKnown RBP10.25□□□□□ -0.77
SNCA-207ENST00000502987 TREX1Q9NSU2 369 aa10.25□□□□□ -0.77
SNCA-207ENST00000502987 SYBUQ9NX95 663 aa10.25□□□□□ -0.77
SNCA-207ENST00000502987 SAMD15Q9P1V8 674 aa10.25□□□□□ -0.77
SNCA-207ENST00000502987 SLC5A6Q9Y289 635 aa10.25□□□□□ -0.77
SNCA-207ENST00000502987 HS3ST3B1Q9Y662 390 aa10.25□□□□□ -0.77
SNCA-207ENST00000502987 CNTRLQ7Z7A1 2325 aa10.25□□□□□ -0.77
SNCA-207ENST00000502987 CTAGE9A4FU28 777 aa10.24□□□□□ -0.77
SNCA-207ENST00000502987 MAP2K7O14733 419 aa10.24□□□□□ -0.77
SNCA-207ENST00000502987 PRICKLE3O43900 615 aaPredicted RBP10.24□□□□□ -0.77
SNCA-207ENST00000502987 VPS26AO75436 327 aa10.24□□□□□ -0.77
SNCA-207ENST00000502987 SYF2O95926 243 aaKnown RBP10.24□□□□□ -0.77
SNCA-207ENST00000502987 ESR1P03372 595 aa10.24□□□□□ -0.77
SNCA-207ENST00000502987 ZGLP1P0C6A0 271 aa10.24□□□□□ -0.77
SNCA-207ENST00000502987 ACPPP15309 386 aa10.24□□□□□ -0.77
SNCA-207ENST00000502987 PAMP19021 973 aa10.24□□□□□ -0.77
SNCA-207ENST00000502987 CXCR2P25025 360 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms