RNA–Protein interactions for RNA: ENST00000502850.5

NUP54-202, Transcript of nucleoporin 54, humanhuman

TSL 1 (best)

Gene NUP54, Length 1,604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-202ENST00000502850 CCM2Q9BSQ5 444 aa11.64□□□□□ -0.55
NUP54-202ENST00000502850 RIOK2Q9BVS4 552 aaKnown RBP11.64□□□□□ -0.55
NUP54-202ENST00000502850 RBM4Q9BWF3 364 aaKnown RBP11.64□□□□□ -0.55
NUP54-202ENST00000502850 DCAF13Q9NV06 445 aaKnown RBP11.64□□□□□ -0.55
NUP54-202ENST00000502850 FAM120CQ9NX05 1096 aaKnown RBP11.64□□□□□ -0.55
NUP54-202ENST00000502850 SLC25A37Q9NYZ2 338 aa11.64□□□□□ -0.55
NUP54-202ENST00000502850 CORO2BQ9UQ03 480 aa11.64□□□□□ -0.55
NUP54-202ENST00000502850 SLC22A14Q9Y267 594 aa11.64□□□□□ -0.55
NUP54-202ENST00000502850 CEPT1Q9Y6K0 416 aa11.64□□□□□ -0.55
NUP54-202ENST00000502850 V9GYQ6 96 aa11.64□□□□□ -0.55
NUP54-202ENST00000502850 MYOFQ9NZM1 2061 aa11.63□□□□□ -0.55
NUP54-202ENST00000502850 HIDE1A8MVS5 230 aa11.63□□□□□ -0.55
NUP54-202ENST00000502850 G3V2T6 193 aa11.63□□□□□ -0.55
NUP54-202ENST00000502850 H0YIV9 168 aa11.63□□□□□ -0.55
NUP54-202ENST00000502850 NRG2O14511 850 aaPredicted RBP11.63□□□□□ -0.55
NUP54-202ENST00000502850 GNGT2O14610 69 aa11.63□□□□□ -0.55
NUP54-202ENST00000502850 HOXC11O43248 304 aaPredicted RBP11.63□□□□□ -0.55
NUP54-202ENST00000502850 CREG1O75629 220 aa11.63□□□□□ -0.55
NUP54-202ENST00000502850 CCNDBP1O95273 360 aa11.63□□□□□ -0.55
NUP54-202ENST00000502850 CST1P01037 141 aa11.63□□□□□ -0.55
NUP54-202ENST00000502850 ALPLP05186 524 aa11.63□□□□□ -0.55
NUP54-202ENST00000502850 ETS2P15036 469 aa11.63□□□□□ -0.55
NUP54-202ENST00000502850 MYOGP15173 224 aa11.63□□□□□ -0.55
NUP54-202ENST00000502850 PPIBP23284 216 aaKnown RBP11.63□□□□□ -0.55
NUP54-202ENST00000502850 ETV3P41162 512 aa11.63□□□□□ -0.55
NUP54-202ENST00000502850 DGKGP49619 791 aa11.63□□□□□ -0.55
NUP54-202ENST00000502850 ERVFC1P60507 584 aa11.63□□□□□ -0.55
NUP54-202ENST00000502850 PFN3P60673 137 aa11.63□□□□□ -0.55
NUP54-202ENST00000502850 ELP6Q0PNE2 266 aa11.63□□□□□ -0.55
NUP54-202ENST00000502850 ZBED5Q49AG3 693 aa11.63□□□□□ -0.55
NUP54-202ENST00000502850 XKR6Q5GH73 641 aa11.63□□□□□ -0.55
NUP54-202ENST00000502850 PRSS36Q5K4E3 855 aa11.63□□□□□ -0.55
NUP54-202ENST00000502850 DNAJC14Q6Y2X3 702 aaPredicted RBP11.63□□□□□ -0.55
NUP54-202ENST00000502850 Q6ZVL8 140 aa11.63□□□□□ -0.55
NUP54-202ENST00000502850 ZNF765Q7L2R6 523 aa11.63□□□□□ -0.55
NUP54-202ENST00000502850 LPCAT2Q7L5N7 544 aa11.63□□□□□ -0.55
NUP54-202ENST00000502850 TECPR1Q7Z6L1 1165 aa11.63□□□□□ -0.55
NUP54-202ENST00000502850 THOC6Q86W42 341 aaKnown RBP11.63□□□□□ -0.55
NUP54-202ENST00000502850 HIPK1Q86Z02 1210 aa11.63□□□□□ -0.55
NUP54-202ENST00000502850 SYT12Q8IV01 421 aa11.63□□□□□ -0.55
NUP54-202ENST00000502850 VRK3Q8IV63 474 aa11.63□□□□□ -0.55
NUP54-202ENST00000502850 ZCCHC7Q8N3Z6 543 aaKnown RBP11.63□□□□□ -0.55
NUP54-202ENST00000502850 CELF5Q8N6W0 485 aaKnown RBP11.63□□□□□ -0.55
NUP54-202ENST00000502850 ZNF555Q8NEP9 628 aa11.63□□□□□ -0.55
NUP54-202ENST00000502850 ZNF420Q8TAQ5 688 aaPredicted RBP11.63□□□□□ -0.55
NUP54-202ENST00000502850 PHOSPHO2Q8TCD6 241 aa11.63□□□□□ -0.55
NUP54-202ENST00000502850 GFM2Q969S9 779 aaKnown RBP11.63□□□□□ -0.55
NUP54-202ENST00000502850 AP2M1Q96CW1 435 aa11.63□□□□□ -0.55
NUP54-202ENST00000502850 MTFMTQ96DP5 389 aaKnown RBP11.63□□□□□ -0.55
NUP54-202ENST00000502850 TSSK3Q96PN8 268 aa11.63□□□□□ -0.55
NUP54-202ENST00000502850 ABCG8Q9H221 673 aa11.63□□□□□ -0.55
NUP54-202ENST00000502850 SERHLQ9NQF3 203 aa11.63□□□□□ -0.55
NUP54-202ENST00000502850 DDX18Q9NVP1 670 aaKnown RBP11.63□□□□□ -0.55
NUP54-202ENST00000502850 IFT80Q9P2H3 777 aaPredicted RBP11.63□□□□□ -0.55
NUP54-202ENST00000502850 VPS29Q9UBQ0 182 aa11.63□□□□□ -0.55
NUP54-202ENST00000502850 FBXO10Q9UK96 956 aa11.63□□□□□ -0.55
NUP54-202ENST00000502850 USP22Q9UPT9 525 aa11.63□□□□□ -0.55
NUP54-202ENST00000502850 DLGAP4Q9Y2H0 992 aa11.63□□□□□ -0.55
NUP54-202ENST00000502850 SLC27A6Q9Y2P4 619 aa11.63□□□□□ -0.55
NUP54-202ENST00000502850 PCDHB14Q9Y5E9 798 aa11.63□□□□□ -0.55
NUP54-202ENST00000502850 PCDHGA11Q9Y5H2 935 aa11.63□□□□□ -0.55
NUP54-202ENST00000502850 ORC6Q9Y5N6 252 aa11.63□□□□□ -0.55
NUP54-202ENST00000502850 MYOCOSA0A1B0GUC4 107 aa11.62□□□□□ -0.55
NUP54-202ENST00000502850 ARHGEF33A8MVX0 844 aa11.62□□□□□ -0.55
NUP54-202ENST00000502850 TTC34A8MYJ7 566 aa11.62□□□□□ -0.55
NUP54-202ENST00000502850 PLOD2O00469 737 aa11.62□□□□□ -0.55
NUP54-202ENST00000502850 SGTAO43765 313 aa11.62□□□□□ -0.55
NUP54-202ENST00000502850 EPN2O95208 641 aa11.62□□□□□ -0.55
NUP54-202ENST00000502850 ADH5P11766 374 aa11.62□□□□□ -0.55
NUP54-202ENST00000502850 HOXB9P17482 250 aaPredicted RBP11.62□□□□□ -0.55
NUP54-202ENST00000502850 ITPKAP23677 461 aa11.62□□□□□ -0.55
NUP54-202ENST00000502850 WEE1P30291 646 aa11.62□□□□□ -0.55
NUP54-202ENST00000502850 SOX11P35716 441 aa11.62□□□□□ -0.55
NUP54-202ENST00000502850 RPS6KA3P51812 740 aa11.62□□□□□ -0.55
NUP54-202ENST00000502850 PLIN5Q00G26 463 aa11.62□□□□□ -0.55
NUP54-202ENST00000502850 DUOXA1Q1HG43 343 aa11.62□□□□□ -0.55
NUP54-202ENST00000502850 PGS1Q32NB8 556 aa11.62□□□□□ -0.55
NUP54-202ENST00000502850 BCL7AQ4VC05 210 aa11.62□□□□□ -0.55
NUP54-202ENST00000502850 SPIN4Q56A73 249 aa11.62□□□□□ -0.55
NUP54-202ENST00000502850 LRRC73Q5JTD7 316 aa11.62□□□□□ -0.55
NUP54-202ENST00000502850 RBM48Q5RL73 367 aaKnown RBP11.62□□□□□ -0.55
NUP54-202ENST00000502850 TMEM214Q6NUQ4 689 aaKnown RBP11.62□□□□□ -0.55
NUP54-202ENST00000502850 AGTRAPQ6RW13 159 aa11.62□□□□□ -0.55
NUP54-202ENST00000502850 ISLR2Q6UXK2 745 aa11.62□□□□□ -0.55
NUP54-202ENST00000502850 SERPINA13PQ6UXR4 307 aa11.62□□□□□ -0.55
NUP54-202ENST00000502850 GCNT7Q6ZNI0 430 aa11.62□□□□□ -0.55
NUP54-202ENST00000502850 STK32CQ86UX6 486 aa11.62□□□□□ -0.55
NUP54-202ENST00000502850 ERI1Q8IV48 349 aaKnown RBP11.62□□□□□ -0.55
NUP54-202ENST00000502850 SLC22A15Q8IZD6 547 aa11.62□□□□□ -0.55
NUP54-202ENST00000502850 PGBD3Q8N328 593 aa11.62□□□□□ -0.55
NUP54-202ENST00000502850 VPS37AQ8NEZ2 397 aa11.62□□□□□ -0.55
NUP54-202ENST00000502850 OR8J2Q8NGG1 315 aa11.62□□□□□ -0.55
NUP54-202ENST00000502850 OR5K1Q8NHB7 308 aa11.62□□□□□ -0.55
NUP54-202ENST00000502850 CLHC1Q8NHS4 586 aa11.62□□□□□ -0.55
NUP54-202ENST00000502850 FBXO30Q8TB52 745 aa11.62□□□□□ -0.55
NUP54-202ENST00000502850 POF1BQ8WVV4 589 aa11.62□□□□□ -0.55
NUP54-202ENST00000502850 SCAMP4Q969E2 229 aa11.62□□□□□ -0.55
NUP54-202ENST00000502850 TBC1D20Q96BZ9 403 aa11.62□□□□□ -0.55
NUP54-202ENST00000502850 CXorf40BQ96DE9 158 aa11.62□□□□□ -0.55
NUP54-202ENST00000502850 HIC2Q96JB3 615 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms