RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 REXO5Q96IC2 774 aaKnown RBP7.21□□□□□ -1.26
PDGFC-203ENST00000502773 ZNF347Q96SE7 839 aa7.21□□□□□ -1.26
PDGFC-203ENST00000502773 CHID1Q9BWS9 393 aa7.21□□□□□ -1.26
PDGFC-203ENST00000502773 NSUN3Q9H649 340 aaKnown RBP7.21□□□□□ -1.26
PDGFC-203ENST00000502773 ARMC7Q9H6L4 198 aa7.21□□□□□ -1.26
PDGFC-203ENST00000502773 ZNF334Q9HCZ1 680 aaPredicted RBP7.21□□□□□ -1.26
PDGFC-203ENST00000502773 AGPAT4Q9NRZ5 378 aa7.21□□□□□ -1.26
PDGFC-203ENST00000502773 FAM32AQ9Y421 112 aaKnown RBP7.21□□□□□ -1.26
PDGFC-203ENST00000502773 ZNF451Q9Y4E5 1061 aa7.21□□□□□ -1.26
PDGFC-203ENST00000502773 LOC730098B7Z3J9 87 aa7.21□□□□□ -1.26
PDGFC-203ENST00000502773 G3V2T6 193 aa7.21□□□□□ -1.26
PDGFC-203ENST00000502773 KPNA4O00629 521 aaPredicted RBP7.21□□□□□ -1.26
PDGFC-203ENST00000502773 RNASEH2AO75792 299 aaKnown RBP7.21□□□□□ -1.26
PDGFC-203ENST00000502773 RHOP08100 348 aa7.21□□□□□ -1.26
PDGFC-203ENST00000502773 ALDOCP09972 364 aaKnown RBP7.21□□□□□ -1.26
PDGFC-203ENST00000502773 GGT1P19440 569 aa7.21□□□□□ -1.26
PDGFC-203ENST00000502773 MYF6P23409 242 aa7.21□□□□□ -1.26
PDGFC-203ENST00000502773 HRH2P25021 359 aa7.21□□□□□ -1.26
PDGFC-203ENST00000502773 GRK3P35626 688 aa7.21□□□□□ -1.26
PDGFC-203ENST00000502773 ALDH3A2P51648 485 aa7.21□□□□□ -1.26
PDGFC-203ENST00000502773 PCDH1Q08174 1060 aa7.21□□□□□ -1.26
PDGFC-203ENST00000502773 FAPQ12884 760 aa7.21□□□□□ -1.26
PDGFC-203ENST00000502773 CHIT1Q13231 466 aa7.21□□□□□ -1.26
PDGFC-203ENST00000502773 ARHGAP19Q14CB8 494 aa7.21□□□□□ -1.26
PDGFC-203ENST00000502773 PGS1Q32NB8 556 aa7.21□□□□□ -1.26
PDGFC-203ENST00000502773 CPTPQ5TA50 214 aa7.21□□□□□ -1.26
PDGFC-203ENST00000502773 DPY19L3Q6ZPD9 716 aa7.21□□□□□ -1.26
PDGFC-203ENST00000502773 TMEM173Q86WV6 379 aaPredicted RBP7.21□□□□□ -1.26
PDGFC-203ENST00000502773 SLC47A1Q96FL8 570 aa7.21□□□□□ -1.26
PDGFC-203ENST00000502773 BCL7BQ9BQE9 202 aa7.21□□□□□ -1.26
PDGFC-203ENST00000502773 RSPH9Q9H1X1 276 aaPredicted RBP7.21□□□□□ -1.26
PDGFC-203ENST00000502773 DPEP2Q9H4A9 486 aa7.21□□□□□ -1.26
PDGFC-203ENST00000502773 ZNF556Q9HAH1 456 aa7.21□□□□□ -1.26
PDGFC-203ENST00000502773 GIN1Q9NXP7 522 aa7.21□□□□□ -1.26
PDGFC-203ENST00000502773 MRPL39Q9NYK5 338 aaKnown RBP7.21□□□□□ -1.26
PDGFC-203ENST00000502773 MAN2B2Q9Y2E5 1009 aa7.21□□□□□ -1.26
PDGFC-203ENST00000502773 FRMPD3Q5JV73 1810 aa7.21□□□□□ -1.26
PDGFC-203ENST00000502773 MIA3Q5JRA6 1907 aa7.2□□□□□ -1.26
PDGFC-203ENST00000502773 NME4O00746 187 aa7.2□□□□□ -1.26
PDGFC-203ENST00000502773 HOXC11O43248 304 aaPredicted RBP7.2□□□□□ -1.26
PDGFC-203ENST00000502773 IDH3BO43837 385 aa7.2□□□□□ -1.26
PDGFC-203ENST00000502773 G6PDP11413 515 aa7.2□□□□□ -1.26
PDGFC-203ENST00000502773 CAPN3P20807 821 aa7.2□□□□□ -1.26
PDGFC-203ENST00000502773 KCNC1P48547 511 aa7.2□□□□□ -1.26
PDGFC-203ENST00000502773 TRAF3Q13114 568 aa7.2□□□□□ -1.26
PDGFC-203ENST00000502773 DAG1Q14118 895 aa7.2□□□□□ -1.26
PDGFC-203ENST00000502773 GPNMBQ14956 572 aa7.2□□□□□ -1.26
PDGFC-203ENST00000502773 CPSF6Q16630 551 aaKnown RBP eCLIP7.2□□□□□ -1.26
PDGFC-203ENST00000502773 RFTN2Q52LD8 501 aaPredicted RBP7.2□□□□□ -1.26
PDGFC-203ENST00000502773 GRHL2Q6ISB3 625 aa7.2□□□□□ -1.26
PDGFC-203ENST00000502773 BHLHB9Q6PI77 547 aa7.2□□□□□ -1.26
PDGFC-203ENST00000502773 UGT2A3Q6UWM9 527 aa7.2□□□□□ -1.26
PDGFC-203ENST00000502773 IKBIPQ70UQ0 350 aa7.2□□□□□ -1.26
PDGFC-203ENST00000502773 GAREM2Q75VX8 874 aa7.2□□□□□ -1.26
PDGFC-203ENST00000502773 FUNDC1Q8IVP5 155 aa7.2□□□□□ -1.26
PDGFC-203ENST00000502773 ZC3H7AQ8IWR0 971 aaKnown RBP7.2□□□□□ -1.26
PDGFC-203ENST00000502773 ZNF786Q8N393 782 aa7.2□□□□□ -1.26
PDGFC-203ENST00000502773 FIG4Q92562 907 aa7.2□□□□□ -1.26
PDGFC-203ENST00000502773 NSUN5Q96P11 429 aaKnown RBP7.2□□□□□ -1.26
PDGFC-203ENST00000502773 C1orf50Q9BV19 199 aa7.2□□□□□ -1.26
PDGFC-203ENST00000502773 SLC46A2Q9BY10 475 aa7.2□□□□□ -1.26
PDGFC-203ENST00000502773 ADNPQ9H2P0 1102 aa7.2□□□□□ -1.26
PDGFC-203ENST00000502773 ZSCAN32Q9NX65 697 aa7.2□□□□□ -1.26
PDGFC-203ENST00000502773 KIF17Q9P2E2 1029 aa7.2□□□□□ -1.26
PDGFC-203ENST00000502773 RSL24D1Q9UHA3 163 aaKnown RBP7.2□□□□□ -1.26
PDGFC-203ENST00000502773 KPNA3O00505 521 aaPredicted RBP7.2□□□□□ -1.26
PDGFC-203ENST00000502773 CXCR6O00574 342 aa7.2□□□□□ -1.26
PDGFC-203ENST00000502773 TIPRLO75663 272 aa7.2□□□□□ -1.26
PDGFC-203ENST00000502773 SLCO2B1O94956 709 aa7.2□□□□□ -1.26
PDGFC-203ENST00000502773 THRBP10828 461 aa7.2□□□□□ -1.26
PDGFC-203ENST00000502773 UGT1A6P19224 532 aa7.2□□□□□ -1.26
PDGFC-203ENST00000502773 UGT1A1P22309 533 aa7.2□□□□□ -1.26
PDGFC-203ENST00000502773 UGT1A4P22310 534 aa7.2□□□□□ -1.26
PDGFC-203ENST00000502773 CD70P32970 193 aa7.2□□□□□ -1.26
PDGFC-203ENST00000502773 UGT1A3P35503 534 aa7.2□□□□□ -1.26
PDGFC-203ENST00000502773 UGT1A5P35504 534 aa7.2□□□□□ -1.26
PDGFC-203ENST00000502773 ANKDD1AQ495B1 522 aa7.2□□□□□ -1.26
PDGFC-203ENST00000502773 THAP5Q7Z6K1 395 aa7.2□□□□□ -1.26
PDGFC-203ENST00000502773 SERPINA11Q86U17 422 aa7.2□□□□□ -1.26
PDGFC-203ENST00000502773 KLHDC8AQ8IYD2 350 aa7.2□□□□□ -1.26
PDGFC-203ENST00000502773 SRFBP1Q8NEF9 429 aaKnown RBP7.2□□□□□ -1.26
PDGFC-203ENST00000502773 TOR1AIP2Q8NFQ8 470 aa7.2□□□□□ -1.26
PDGFC-203ENST00000502773 SH3KBP1Q96B97 665 aa7.2□□□□□ -1.26
PDGFC-203ENST00000502773 BIRC7Q96CA5 298 aa7.2□□□□□ -1.26
PDGFC-203ENST00000502773 UQCC2Q9BRT2 126 aa7.2□□□□□ -1.26
PDGFC-203ENST00000502773 TEX12Q9BXU0 123 aa7.2□□□□□ -1.26
PDGFC-203ENST00000502773 OCEL1Q9H607 264 aa7.2□□□□□ -1.26
PDGFC-203ENST00000502773 CLMPQ9H6B4 373 aa7.2□□□□□ -1.26
PDGFC-203ENST00000502773 GDE1Q9NZC3 331 aa7.2□□□□□ -1.26
PDGFC-203ENST00000502773 BTNL2Q9UIR0 455 aa7.2□□□□□ -1.26
PDGFC-203ENST00000502773 GFYI3L273 518 aa7.2□□□□□ -1.26
PDGFC-203ENST00000502773 CST1P01037 141 aa7.2□□□□□ -1.26
PDGFC-203ENST00000502773 ITGB7P26010 798 aa7.2□□□□□ -1.26
PDGFC-203ENST00000502773 DIO3P55073 304 aa7.2□□□□□ -1.26
PDGFC-203ENST00000502773 VAC14Q08AM6 782 aa7.2□□□□□ -1.26
PDGFC-203ENST00000502773 VEZF1Q14119 521 aa7.2□□□□□ -1.26
PDGFC-203ENST00000502773 ELAVL3Q14576 367 aaKnown RBP7.2□□□□□ -1.26
PDGFC-203ENST00000502773 FAM174BQ3ZCQ3 159 aa7.2□□□□□ -1.26
PDGFC-203ENST00000502773 PLPP4Q5VZY2 271 aa7.2□□□□□ -1.26
PDGFC-203ENST00000502773 SPRED1Q7Z699 444 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms