RNA–Protein interactions for RNA: ENST00000502563.5

UBE2D3-212, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-212ENST00000502563 KCNE4Q8WWG9 221 aa10.32□□□□□ -0.76
UBE2D3-212ENST00000502563 CAVIN3Q969G5 261 aa10.32□□□□□ -0.76
UBE2D3-212ENST00000502563 THAP11Q96EK4 314 aa10.32□□□□□ -0.76
UBE2D3-212ENST00000502563 IL17FQ96PD4 163 aa10.32□□□□□ -0.76
UBE2D3-212ENST00000502563 CCDC77Q9BR77 488 aa10.32□□□□□ -0.76
UBE2D3-212ENST00000502563 PLCD4Q9BRC7 762 aa10.32□□□□□ -0.76
UBE2D3-212ENST00000502563 HAUS8Q9BT25 410 aa10.32□□□□□ -0.76
UBE2D3-212ENST00000502563 EFHD1Q9BUP0 239 aa10.32□□□□□ -0.76
UBE2D3-212ENST00000502563 NMRAL1Q9HBL8 299 aa10.32□□□□□ -0.76
UBE2D3-212ENST00000502563 SOHLH2Q9NX45 425 aa10.32□□□□□ -0.76
UBE2D3-212ENST00000502563 ARL15Q9NXU5 204 aa10.32□□□□□ -0.76
UBE2D3-212ENST00000502563 FOXJ2Q9P0K8 574 aa10.32□□□□□ -0.76
UBE2D3-212ENST00000502563 CTNNAL1Q9UBT7 734 aa10.32□□□□□ -0.76
UBE2D3-212ENST00000502563 SERTAD3Q9UJW9 196 aa10.32□□□□□ -0.76
UBE2D3-212ENST00000502563 ZMIZ1Q9ULJ6 1067 aa10.32□□□□□ -0.76
UBE2D3-212ENST00000502563 PLAGL1Q9UM63 463 aa10.32□□□□□ -0.76
UBE2D3-212ENST00000502563 PLCL2Q9UPR0 1127 aa10.32□□□□□ -0.76
UBE2D3-212ENST00000502563 KCNE1BA0A087WTH5 132 aa10.31□□□□□ -0.76
UBE2D3-212ENST00000502563 SYCE1LA8MT33 242 aa10.31□□□□□ -0.76
UBE2D3-212ENST00000502563 KERAO60938 352 aa10.31□□□□□ -0.76
UBE2D3-212ENST00000502563 CPNE3O75131 537 aaKnown RBP10.31□□□□□ -0.76
UBE2D3-212ENST00000502563 STK17BO94768 372 aa10.31□□□□□ -0.76
UBE2D3-212ENST00000502563 KLHL2O95198 593 aa10.31□□□□□ -0.76
UBE2D3-212ENST00000502563 ONECUT2O95948 504 aa10.31□□□□□ -0.76
UBE2D3-212ENST00000502563 C2P06681 752 aa10.31□□□□□ -0.76
UBE2D3-212ENST00000502563 SNRPAP09012 282 aaKnown RBP10.31□□□□□ -0.76
UBE2D3-212ENST00000502563 EBLN1P0CF75 366 aa10.31□□□□□ -0.76
UBE2D3-212ENST00000502563 RPA3P35244 121 aaPredicted RBP10.31□□□□□ -0.76
UBE2D3-212ENST00000502563 ATP1A2P50993 1020 aa10.31□□□□□ -0.76
UBE2D3-212ENST00000502563 ITGA1P56199 1179 aa10.31□□□□□ -0.76
UBE2D3-212ENST00000502563 TBPL1P62380 186 aa10.31□□□□□ -0.76
UBE2D3-212ENST00000502563 VSNL1P62760 191 aa10.31□□□□□ -0.76
UBE2D3-212ENST00000502563 E2F2Q14209 437 aa10.31□□□□□ -0.76
UBE2D3-212ENST00000502563 FASTKQ14296 549 aaKnown RBP10.31□□□□□ -0.76
UBE2D3-212ENST00000502563 ZNF460Q14592 562 aa10.31□□□□□ -0.76
UBE2D3-212ENST00000502563 ACAP2Q15057 778 aa10.31□□□□□ -0.76
UBE2D3-212ENST00000502563 ZIC1Q15915 447 aa10.31□□□□□ -0.76
UBE2D3-212ENST00000502563 TSNAXIP1Q2TAA8 658 aa10.31□□□□□ -0.76
UBE2D3-212ENST00000502563 MROH9Q5TGP6 573 aa10.31□□□□□ -0.76
UBE2D3-212ENST00000502563 PRAMEF13Q5VWM6 474 aa10.31□□□□□ -0.76
UBE2D3-212ENST00000502563 KIAA1614Q5VZ46 1190 aa10.31□□□□□ -0.76
UBE2D3-212ENST00000502563 RHBDD2Q6NTF9 364 aa10.31□□□□□ -0.76
UBE2D3-212ENST00000502563 FIGLAQ6QHK4 219 aa10.31□□□□□ -0.76
UBE2D3-212ENST00000502563 LRRC69Q6ZNQ3 347 aa10.31□□□□□ -0.76
UBE2D3-212ENST00000502563 ISCA2Q86U28 154 aa10.31□□□□□ -0.76
UBE2D3-212ENST00000502563 CENPLQ8N0S6 344 aaPredicted RBP10.31□□□□□ -0.76
UBE2D3-212ENST00000502563 NLGN4XQ8N0W4 816 aa10.31□□□□□ -0.76
UBE2D3-212ENST00000502563 NLGN4YQ8NFZ3 816 aaPredicted RBP10.31□□□□□ -0.76
UBE2D3-212ENST00000502563 PROKR1Q8TCW9 393 aa10.31□□□□□ -0.76
UBE2D3-212ENST00000502563 AENQ8WTP8 325 aaKnown RBP10.31□□□□□ -0.76
UBE2D3-212ENST00000502563 RHBDF1Q96CC6 855 aa10.31□□□□□ -0.76
UBE2D3-212ENST00000502563 SEC16BQ96JE7 1060 aa10.31□□□□□ -0.76
UBE2D3-212ENST00000502563 PPM1MQ96MI6 270 aa10.31□□□□□ -0.76
UBE2D3-212ENST00000502563 NRTNQ99748 197 aa10.31□□□□□ -0.76
UBE2D3-212ENST00000502563 CAPS2Q9BXY5 557 aa10.31□□□□□ -0.76
UBE2D3-212ENST00000502563 PITHD1Q9GZP4 211 aaPredicted RBP10.31□□□□□ -0.76
UBE2D3-212ENST00000502563 CAB39LQ9H9S4 337 aa10.31□□□□□ -0.76
UBE2D3-212ENST00000502563 APMAPQ9HDC9 416 aa10.31□□□□□ -0.76
UBE2D3-212ENST00000502563 MRPS30Q9NP92 439 aaKnown RBP10.31□□□□□ -0.76
UBE2D3-212ENST00000502563 SNX15Q9NRS6 342 aa10.31□□□□□ -0.76
UBE2D3-212ENST00000502563 TMEM184CQ9NVA4 438 aa10.31□□□□□ -0.76
UBE2D3-212ENST00000502563 EURLQ9NYK6 297 aa10.31□□□□□ -0.76
UBE2D3-212ENST00000502563 GPRC5BQ9NZH0 403 aa10.31□□□□□ -0.76
UBE2D3-212ENST00000502563 COPG2Q9UBF2 871 aa10.31□□□□□ -0.76
UBE2D3-212ENST00000502563 TLK1Q9UKI8 766 aa10.31□□□□□ -0.76
UBE2D3-212ENST00000502563 SNX7Q9UNH6 387 aa10.31□□□□□ -0.76
UBE2D3-212ENST00000502563 SRPK3Q9UPE1 567 aa10.31□□□□□ -0.76
UBE2D3-212ENST00000502563 PCDHGA6Q9Y5G7 932 aa10.31□□□□□ -0.76
UBE2D3-212ENST00000502563 ANKRD11Q6UB99 2663 aaPredicted RBP10.31□□□□□ -0.76
UBE2D3-212ENST00000502563 MAP1BP46821 2468 aaKnown RBP10.31□□□□□ -0.76
UBE2D3-212ENST00000502563 SNRNP200O75643 2136 aaKnown RBP10.31□□□□□ -0.76
UBE2D3-212ENST00000502563 CELSR3Q9NYQ7 3312 aa10.31□□□□□ -0.76
UBE2D3-212ENST00000502563 SDK2Q58EX2 2172 aa10.31□□□□□ -0.76
UBE2D3-212ENST00000502563 PCM1Q15154 2024 aa10.3□□□□□ -0.76
UBE2D3-212ENST00000502563 IGKV1-8A0A0C4DH67 115 aa10.3□□□□□ -0.76
UBE2D3-212ENST00000502563 IQANK1A0A1B0GTG1 560 aa10.3□□□□□ -0.76
UBE2D3-212ENST00000502563 SRRM3A6NNA2 597 aaPredicted RBP10.3□□□□□ -0.76
UBE2D3-212ENST00000502563 C21orf140B9A014 251 aa10.3□□□□□ -0.76
UBE2D3-212ENST00000502563 E7EQ34 232 aa10.3□□□□□ -0.76
UBE2D3-212ENST00000502563 CDC7O00311 574 aa10.3□□□□□ -0.76
UBE2D3-212ENST00000502563 TXNDC9O14530 226 aa10.3□□□□□ -0.76
UBE2D3-212ENST00000502563 PHGDHO43175 533 aaKnown RBP10.3□□□□□ -0.76
UBE2D3-212ENST00000502563 KLK8O60259 260 aa10.3□□□□□ -0.76
UBE2D3-212ENST00000502563 GSTM2P28161 218 aa10.3□□□□□ -0.76
UBE2D3-212ENST00000502563 GCAP28676 217 aa10.3□□□□□ -0.76
UBE2D3-212ENST00000502563 TYK2P29597 1187 aa10.3□□□□□ -0.76
UBE2D3-212ENST00000502563 RORAP35398 523 aa10.3□□□□□ -0.76
UBE2D3-212ENST00000502563 DEKP35659 375 aaKnown RBP10.3□□□□□ -0.76
UBE2D3-212ENST00000502563 SLC6A12P48065 614 aa10.3□□□□□ -0.76
UBE2D3-212ENST00000502563 ARSFP54793 590 aa10.3□□□□□ -0.76
UBE2D3-212ENST00000502563 TLE3Q04726 772 aa10.3□□□□□ -0.76
UBE2D3-212ENST00000502563 FOXM1Q08050 763 aa10.3□□□□□ -0.76
UBE2D3-212ENST00000502563 CLN3Q13286 438 aa10.3□□□□□ -0.76
UBE2D3-212ENST00000502563 TSNQ15631 228 aaKnown RBP10.3□□□□□ -0.76
UBE2D3-212ENST00000502563 ZXDCQ2QGD7 858 aaPredicted RBP10.3□□□□□ -0.76
UBE2D3-212ENST00000502563 MANEAQ5SRI9 462 aa10.3□□□□□ -0.76
UBE2D3-212ENST00000502563 UBAP2Q5T6F2 1119 aaKnown RBP10.3□□□□□ -0.76
UBE2D3-212ENST00000502563 FCRL6Q6DN72 434 aa10.3□□□□□ -0.76
UBE2D3-212ENST00000502563 SULT1C3Q6IMI6 304 aa10.3□□□□□ -0.76
UBE2D3-212ENST00000502563 KLC3Q6P597 504 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms