RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 C8AP07357 584 aa9.56□□□□□ -0.88
CLIP1-204ENST00000501271 JUPP14923 745 aa9.56□□□□□ -0.88
CLIP1-204ENST00000501271 ZNF182P17025 639 aaPredicted RBP9.56□□□□□ -0.88
CLIP1-204ENST00000501271 GSTM2P28161 218 aa9.56□□□□□ -0.88
CLIP1-204ENST00000501271 BNIP3Q12983 259 aa9.56□□□□□ -0.88
CLIP1-204ENST00000501271 MTAPQ13126 283 aa9.56□□□□□ -0.88
CLIP1-204ENST00000501271 C16orf72Q14CZ0 275 aa9.56□□□□□ -0.88
CLIP1-204ENST00000501271 SF1Q15637 639 aaKnown RBP9.56□□□□□ -0.88
CLIP1-204ENST00000501271 UGT8Q16880 541 aa9.56□□□□□ -0.88
CLIP1-204ENST00000501271 DPY19L1Q2PZI1 675 aa9.56□□□□□ -0.88
CLIP1-204ENST00000501271 ANKDD1AQ495B1 522 aa9.56□□□□□ -0.88
CLIP1-204ENST00000501271 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.56□□□□□ -0.88
CLIP1-204ENST00000501271 ZNF691Q5VV52 312 aa9.56□□□□□ -0.88
CLIP1-204ENST00000501271 ZDHHC20Q5W0Z9 365 aa9.56□□□□□ -0.88
CLIP1-204ENST00000501271 CPZQ66K79 652 aa9.56□□□□□ -0.88
CLIP1-204ENST00000501271 ANKRD26P1Q6NSI1 321 aa9.56□□□□□ -0.88
CLIP1-204ENST00000501271 XKR5Q6UX68 686 aa9.56□□□□□ -0.88
CLIP1-204ENST00000501271 GDPD4Q6W3E5 623 aa9.56□□□□□ -0.88
CLIP1-204ENST00000501271 ZBTB46Q86UZ6 589 aa9.56□□□□□ -0.88
CLIP1-204ENST00000501271 ZDHHC21Q8IVQ6 265 aa9.56□□□□□ -0.88
CLIP1-204ENST00000501271 ZC3H7AQ8IWR0 971 aaKnown RBP9.56□□□□□ -0.88
CLIP1-204ENST00000501271 FAM9CQ8IZT9 166 aa9.56□□□□□ -0.88
CLIP1-204ENST00000501271 ARL10Q8N8L6 244 aa9.56□□□□□ -0.88
CLIP1-204ENST00000501271 OR2A12Q8NGT7 310 aa9.56□□□□□ -0.88
CLIP1-204ENST00000501271 FOXJ1Q92949 421 aa9.56□□□□□ -0.88
CLIP1-204ENST00000501271 FCRL1Q96LA6 429 aa9.56□□□□□ -0.88
CLIP1-204ENST00000501271 ZBP1Q9H171 429 aa9.56□□□□□ -0.88
CLIP1-204ENST00000501271 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.56□□□□□ -0.88
CLIP1-204ENST00000501271 PAK1IP1Q9NWT1 392 aaPredicted RBP9.56□□□□□ -0.88
CLIP1-204ENST00000501271 HCFC1R1Q9NWW0 138 aa9.56□□□□□ -0.88
CLIP1-204ENST00000501271 MAFFQ9ULX9 164 aa9.56□□□□□ -0.88
CLIP1-204ENST00000501271 CXorf51AA0A1B0GTR3 108 aa9.56□□□□□ -0.88
CLIP1-204ENST00000501271 SERTM1A2A2V5 107 aa9.56□□□□□ -0.88
CLIP1-204ENST00000501271 E7EQ34 232 aa9.56□□□□□ -0.88
CLIP1-204ENST00000501271 SLC1A7O00341 560 aa9.56□□□□□ -0.88
CLIP1-204ENST00000501271 SLC16A5O15375 505 aa9.56□□□□□ -0.88
CLIP1-204ENST00000501271 NOL3O60936 208 aaKnown RBP9.56□□□□□ -0.88
CLIP1-204ENST00000501271 SCN2BO60939 215 aa9.56□□□□□ -0.88
CLIP1-204ENST00000501271 CCNDBP1O95273 360 aa9.56□□□□□ -0.88
CLIP1-204ENST00000501271 ACPPP15309 386 aa9.56□□□□□ -0.88
CLIP1-204ENST00000501271 CCNA2P20248 432 aa9.56□□□□□ -0.88
CLIP1-204ENST00000501271 RANBP1P43487 201 aa9.56□□□□□ -0.88
CLIP1-204ENST00000501271 PLA2G16P53816 162 aa9.56□□□□□ -0.88
CLIP1-204ENST00000501271 TMBIM6P55061 237 aa9.56□□□□□ -0.88
CLIP1-204ENST00000501271 AP1S2P56377 157 aa9.56□□□□□ -0.88
CLIP1-204ENST00000501271 WNT3P56703 355 aa9.56□□□□□ -0.88
CLIP1-204ENST00000501271 GABARAPL2P60520 117 aa9.56□□□□□ -0.88
CLIP1-204ENST00000501271 TMED1Q13445 227 aa9.56□□□□□ -0.88
CLIP1-204ENST00000501271 Q6ZVL8 140 aa9.56□□□□□ -0.88
CLIP1-204ENST00000501271 CEP68Q76N32 757 aa9.56□□□□□ -0.88
CLIP1-204ENST00000501271 GALNT5Q7Z7M9 940 aa9.56□□□□□ -0.88
CLIP1-204ENST00000501271 SERPINA11Q86U17 422 aa9.56□□□□□ -0.88
CLIP1-204ENST00000501271 SYT12Q8IV01 421 aa9.56□□□□□ -0.88
CLIP1-204ENST00000501271 RASGRP3Q8IV61 690 aa9.56□□□□□ -0.88
CLIP1-204ENST00000501271 NAT16Q8N8M0 369 aa9.56□□□□□ -0.88
CLIP1-204ENST00000501271 FNDC8Q8TC99 324 aa9.56□□□□□ -0.88
CLIP1-204ENST00000501271 MCOLN3Q8TDD5 553 aa9.56□□□□□ -0.88
CLIP1-204ENST00000501271 CSGALNACT1Q8TDX6 532 aa9.56□□□□□ -0.88
CLIP1-204ENST00000501271 PANX1Q96RD7 426 aa9.56□□□□□ -0.88
CLIP1-204ENST00000501271 CSF3RQ99062 836 aa9.56□□□□□ -0.88
CLIP1-204ENST00000501271 MTERF1Q99551 399 aaKnown RBP9.56□□□□□ -0.88
CLIP1-204ENST00000501271 EMILIN2Q9BXX0 1053 aa9.56□□□□□ -0.88
CLIP1-204ENST00000501271 CEP44Q9C0F1 390 aa9.56□□□□□ -0.88
CLIP1-204ENST00000501271 TBX21Q9UL17 535 aa9.56□□□□□ -0.88
CLIP1-204ENST00000501271 OGDHLQ9ULD0 1010 aa9.56□□□□□ -0.88
CLIP1-204ENST00000501271 TRIM17Q9Y577 477 aa9.56□□□□□ -0.88
CLIP1-204ENST00000501271 ARHGEF33A8MVX0 844 aa9.55□□□□□ -0.88
CLIP1-204ENST00000501271 FADS2P1A8MWK0 482 aa9.55□□□□□ -0.88
CLIP1-204ENST00000501271 CLIC1O00299 241 aa9.55□□□□□ -0.88
CLIP1-204ENST00000501271 FPGTO14772 594 aa9.55□□□□□ -0.88
CLIP1-204ENST00000501271 YY2O15391 372 aa9.55□□□□□ -0.88
CLIP1-204ENST00000501271 CCL16O15467 120 aa9.55□□□□□ -0.88
CLIP1-204ENST00000501271 FKTNO75072 461 aa9.55□□□□□ -0.88
CLIP1-204ENST00000501271 INHBBP09529 407 aa9.55□□□□□ -0.88
CLIP1-204ENST00000501271 CTSAP10619 480 aa9.55□□□□□ -0.88
CLIP1-204ENST00000501271 PABPC1P11940 636 aaKnown RBP9.55□□□□□ -0.88
CLIP1-204ENST00000501271 ENGP17813 658 aa9.55□□□□□ -0.88
CLIP1-204ENST00000501271 EFNA1P20827 205 aaPredicted RBP9.55□□□□□ -0.88
CLIP1-204ENST00000501271 PRPS1L1P21108 318 aa9.55□□□□□ -0.88
CLIP1-204ENST00000501271 MAP4P27816 1152 aaKnown RBP9.55□□□□□ -0.88
CLIP1-204ENST00000501271 ETV3P41162 512 aa9.55□□□□□ -0.88
CLIP1-204ENST00000501271 IRF8Q02556 426 aa9.55□□□□□ -0.88
CLIP1-204ENST00000501271 TUBA3CQ13748 450 aa9.55□□□□□ -0.88
CLIP1-204ENST00000501271 DDX39BQ13838 428 aaKnown RBP9.55□□□□□ -0.88
CLIP1-204ENST00000501271 DUOXA1Q1HG43 343 aa9.55□□□□□ -0.88
CLIP1-204ENST00000501271 ADNP2Q6IQ32 1131 aa9.55□□□□□ -0.88
CLIP1-204ENST00000501271 ZCCHC8Q6NZY4 707 aaKnown RBP9.55□□□□□ -0.88
CLIP1-204ENST00000501271 SHQ1Q6PI26 577 aaKnown RBP9.55□□□□□ -0.88
CLIP1-204ENST00000501271 MSANTD1Q6ZTZ1 278 aa9.55□□□□□ -0.88
CLIP1-204ENST00000501271 GPR155Q7Z3F1 870 aa9.55□□□□□ -0.88
CLIP1-204ENST00000501271 CYP4Z1Q86W10 505 aa9.55□□□□□ -0.88
CLIP1-204ENST00000501271 HIPK1Q86Z02 1210 aa9.55□□□□□ -0.88
CLIP1-204ENST00000501271 ZZZ3Q8IYH5 903 aa9.55□□□□□ -0.88
CLIP1-204ENST00000501271 CLECL1Q8IZS7 167 aa9.55□□□□□ -0.88
CLIP1-204ENST00000501271 CNIH3Q8TBE1 160 aa9.55□□□□□ -0.88
CLIP1-204ENST00000501271 WDR20Q8TBZ3 569 aa9.55□□□□□ -0.88
CLIP1-204ENST00000501271 FBXL8Q96CD0 374 aa9.55□□□□□ -0.88
CLIP1-204ENST00000501271 DPH2Q9BQC3 489 aaPredicted RBP9.55□□□□□ -0.88
CLIP1-204ENST00000501271 AASDHPPTQ9NRN7 309 aa9.55□□□□□ -0.88
CLIP1-204ENST00000501271 SAMD4AQ9UPU9 718 aaKnown RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms