RNA–Protein interactions for RNA: ENST00000496677.5

CLDN12-213, Transcript of claudin 12, humanhuman

TSL 1 (best)

Gene CLDN12, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12-213ENST00000496677 ZNF425Q6IV72 752 aa11.84□□□□□ -0.51
CLDN12-213ENST00000496677 TTLL10Q6ZVT0 673 aa11.84□□□□□ -0.51
CLDN12-213ENST00000496677 PAQR7Q86WK9 346 aa11.84□□□□□ -0.51
CLDN12-213ENST00000496677 RAB43Q86YS6 212 aa11.84□□□□□ -0.51
CLDN12-213ENST00000496677 CREG2Q8IUH2 290 aa11.84□□□□□ -0.51
CLDN12-213ENST00000496677 RAB42Q8N4Z0 105 aa11.84□□□□□ -0.51
CLDN12-213ENST00000496677 DTWD1Q8N5C7 304 aa11.84□□□□□ -0.51
CLDN12-213ENST00000496677 C2CD4AQ8NCU7 369 aaPredicted RBP11.84□□□□□ -0.51
CLDN12-213ENST00000496677 CD200R1Q8TD46 325 aa11.84□□□□□ -0.51
CLDN12-213ENST00000496677 ZNF480Q8WV37 535 aa11.84□□□□□ -0.51
CLDN12-213ENST00000496677 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.84□□□□□ -0.51
CLDN12-213ENST00000496677 SMPDL3AQ92484 453 aa11.84□□□□□ -0.51
CLDN12-213ENST00000496677 PDLIM2Q96JY6 352 aa11.84□□□□□ -0.51
CLDN12-213ENST00000496677 SPSB2Q99619 263 aa11.84□□□□□ -0.51
CLDN12-213ENST00000496677 SMAD5Q99717 465 aaKnown RBP11.84□□□□□ -0.51
CLDN12-213ENST00000496677 EBNA1BP2Q99848 306 aaKnown RBP11.84□□□□□ -0.51
CLDN12-213ENST00000496677 SELENOSQ9BQE4 189 aa11.84□□□□□ -0.51
CLDN12-213ENST00000496677 AARSD1Q9BTE6 412 aaKnown RBP11.84□□□□□ -0.51
CLDN12-213ENST00000496677 DPH7Q9BTV6 452 aa11.84□□□□□ -0.51
CLDN12-213ENST00000496677 WDR54Q9H977 334 aa11.84□□□□□ -0.51
CLDN12-213ENST00000496677 NDOR1Q9UHB4 597 aa11.84□□□□□ -0.51
CLDN12-213ENST00000496677 GPN3Q9UHW5 284 aaPredicted RBP11.84□□□□□ -0.51
CLDN12-213ENST00000496677 PLAAQ9Y263 795 aa11.84□□□□□ -0.51
CLDN12-213ENST00000496677 COMMD10Q9Y6G5 202 aa11.84□□□□□ -0.51
CLDN12-213ENST00000496677 GOLGA6L10A0A0M3HER8 536 aa11.83□□□□□ -0.52
CLDN12-213ENST00000496677 HYKKA2RU49 373 aa11.83□□□□□ -0.52
CLDN12-213ENST00000496677 E5RI56 91 aa11.83□□□□□ -0.52
CLDN12-213ENST00000496677 E7ENX8 843 aa11.83□□□□□ -0.52
CLDN12-213ENST00000496677 SORBS2O94875 1100 aaKnown RBP11.83□□□□□ -0.52
CLDN12-213ENST00000496677 SLC16A8O95907 504 aa11.83□□□□□ -0.52
CLDN12-213ENST00000496677 CATP04040 527 aaKnown RBP11.83□□□□□ -0.52
CLDN12-213ENST00000496677 PGAM1P18669 254 aa11.83□□□□□ -0.52
CLDN12-213ENST00000496677 ALAS2P22557 587 aa11.83□□□□□ -0.52
CLDN12-213ENST00000496677 CMPK1P30085 196 aa11.83□□□□□ -0.52
CLDN12-213ENST00000496677 HSD17B2P37059 387 aa11.83□□□□□ -0.52
CLDN12-213ENST00000496677 FOLR3P41439 243 aa11.83□□□□□ -0.52
CLDN12-213ENST00000496677 PNLIPRP1P54315 467 aa11.83□□□□□ -0.52
CLDN12-213ENST00000496677 EMP3P54852 163 aa11.83□□□□□ -0.52
CLDN12-213ENST00000496677 RRADP55042 308 aa11.83□□□□□ -0.52
CLDN12-213ENST00000496677 MLLT10P55197 1068 aa11.83□□□□□ -0.52
CLDN12-213ENST00000496677 VSX2P58304 361 aaPredicted RBP11.83□□□□□ -0.52
CLDN12-213ENST00000496677 TAP2Q03519 686 aa11.83□□□□□ -0.52
CLDN12-213ENST00000496677 PRDX1Q06830 199 aaKnown RBP11.83□□□□□ -0.52
CLDN12-213ENST00000496677 SRSF1Q07955 248 aaKnown RBP eCLIP11.83□□□□□ -0.52
CLDN12-213ENST00000496677 DHX9Q08211 1270 aaKnown RBP11.83□□□□□ -0.52
CLDN12-213ENST00000496677 CUL1Q13616 776 aa11.83□□□□□ -0.52
CLDN12-213ENST00000496677 CRYMQ14894 314 aa11.83□□□□□ -0.52
CLDN12-213ENST00000496677 NKG7Q16617 165 aa11.83□□□□□ -0.52
CLDN12-213ENST00000496677 FAM214AQ32MH5 1076 aa11.83□□□□□ -0.52
CLDN12-213ENST00000496677 TTLL9Q3SXZ7 439 aa11.83□□□□□ -0.52
CLDN12-213ENST00000496677 NADK2Q4G0N4 442 aa11.83□□□□□ -0.52
CLDN12-213ENST00000496677 DCAF10Q5QP82 559 aa11.83□□□□□ -0.52
CLDN12-213ENST00000496677 SUSD1Q6UWL2 747 aa11.83□□□□□ -0.52
CLDN12-213ENST00000496677 CNTN4Q8IWV2 1026 aa11.83□□□□□ -0.52
CLDN12-213ENST00000496677 ARHGEF39Q8N4T4 335 aa11.83□□□□□ -0.52
CLDN12-213ENST00000496677 RBMXL3Q8N7X1 1067 aaKnown RBP11.83□□□□□ -0.52
CLDN12-213ENST00000496677 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.83□□□□□ -0.52
CLDN12-213ENST00000496677 CALML6Q8TD86 181 aa11.83□□□□□ -0.52
CLDN12-213ENST00000496677 NACC2Q96BF6 587 aa11.83□□□□□ -0.52
CLDN12-213ENST00000496677 GPR21Q99679 349 aa11.83□□□□□ -0.52
CLDN12-213ENST00000496677 PLCD4Q9BRC7 762 aa11.83□□□□□ -0.52
CLDN12-213ENST00000496677 FAM114A2Q9NRY5 505 aa11.83□□□□□ -0.52
CLDN12-213ENST00000496677 IARS2Q9NSE4 1012 aaKnown RBP11.83□□□□□ -0.52
CLDN12-213ENST00000496677 IRAK4Q9NWZ3 460 aa11.83□□□□□ -0.52
CLDN12-213ENST00000496677 P4HTMQ9NXG6 502 aa11.83□□□□□ -0.52
CLDN12-213ENST00000496677 ANKMY1Q9P2S6 941 aa11.83□□□□□ -0.52
CLDN12-213ENST00000496677 ZNF451Q9Y4E5 1061 aa11.83□□□□□ -0.52
CLDN12-213ENST00000496677 PRRC2CQ9Y520 2896 aaKnown RBP11.82□□□□□ -0.52
CLDN12-213ENST00000496677 HEATR5BQ9P2D3 2071 aa11.82□□□□□ -0.52
CLDN12-213ENST00000496677 COL12A1Q99715 3063 aa11.82□□□□□ -0.52
CLDN12-213ENST00000496677 A0A0J9YVX5 310 aa11.82□□□□□ -0.52
CLDN12-213ENST00000496677 A6NL46 340 aa11.82□□□□□ -0.52
CLDN12-213ENST00000496677 H0YGG7 62 aa11.82□□□□□ -0.52
CLDN12-213ENST00000496677 MASP2O00187 686 aa11.82□□□□□ -0.52
CLDN12-213ENST00000496677 EIF3FO00303 357 aaPredicted RBP11.82□□□□□ -0.52
CLDN12-213ENST00000496677 FANCGO15287 622 aa11.82□□□□□ -0.52
CLDN12-213ENST00000496677 TP73O15350 636 aa11.82□□□□□ -0.52
CLDN12-213ENST00000496677 BANF1O75531 89 aa11.82□□□□□ -0.52
CLDN12-213ENST00000496677 ERVK-10P10266 1014 aa11.82□□□□□ -0.52
CLDN12-213ENST00000496677 PIM1P11309 404 aaPredicted RBP11.82□□□□□ -0.52
CLDN12-213ENST00000496677 ENO3P13929 434 aaPredicted RBP11.82□□□□□ -0.52
CLDN12-213ENST00000496677 MMP11P24347 488 aa11.82□□□□□ -0.52
CLDN12-213ENST00000496677 OR1D4P47884 311 aa11.82□□□□□ -0.52
CLDN12-213ENST00000496677 ARF3P61204 181 aaPredicted RBP11.82□□□□□ -0.52
CLDN12-213ENST00000496677 PPP1R7Q15435 360 aa11.82□□□□□ -0.52
CLDN12-213ENST00000496677 PCGF5Q86SE9 256 aa11.82□□□□□ -0.52
CLDN12-213ENST00000496677 KCNMB4Q86W47 210 aa11.82□□□□□ -0.52
CLDN12-213ENST00000496677 HPS6Q86YV9 775 aa11.82□□□□□ -0.52
CLDN12-213ENST00000496677 Q8NA96 180 aa11.82□□□□□ -0.52
CLDN12-213ENST00000496677 C10orf90Q96M02 699 aa11.82□□□□□ -0.52
CLDN12-213ENST00000496677 FER1L6-AS2Q96M78 137 aa11.82□□□□□ -0.52
CLDN12-213ENST00000496677 PWWP2AQ96N64 755 aa11.82□□□□□ -0.52
CLDN12-213ENST00000496677 OR2A5Q96R48 311 aa11.82□□□□□ -0.52
CLDN12-213ENST00000496677 ZFYVE21Q9BQ24 234 aa11.82□□□□□ -0.52
CLDN12-213ENST00000496677 WDR83Q9BRX9 315 aaKnown RBP11.82□□□□□ -0.52
CLDN12-213ENST00000496677 FAM167BQ9BTA0 163 aa11.82□□□□□ -0.52
CLDN12-213ENST00000496677 ACAT2Q9BWD1 397 aa11.82□□□□□ -0.52
CLDN12-213ENST00000496677 GPR83Q9NYM4 423 aa11.82□□□□□ -0.52
CLDN12-213ENST00000496677 C5AR2Q9P296 337 aa11.82□□□□□ -0.52
CLDN12-213ENST00000496677 ZC3H7BQ9UGR2 993 aaKnown RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms