RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 FCRL1Q96LA6 429 aa10.75□□□□□ -0.69
CMSS1-208ENST00000496116 RBM4BQ9BQ04 359 aaKnown RBP10.75□□□□□ -0.69
CMSS1-208ENST00000496116 CCM2Q9BSQ5 444 aa10.75□□□□□ -0.69
CMSS1-208ENST00000496116 INPP5KQ9BT40 448 aa10.75□□□□□ -0.69
CMSS1-208ENST00000496116 RBM4Q9BWF3 364 aaKnown RBP10.75□□□□□ -0.69
CMSS1-208ENST00000496116 ING2Q9H160 280 aa10.75□□□□□ -0.69
CMSS1-208ENST00000496116 HPS4Q9NQG7 708 aa10.75□□□□□ -0.69
CMSS1-208ENST00000496116 SLC6A13Q9NSD5 602 aa10.75□□□□□ -0.69
CMSS1-208ENST00000496116 PPT2Q9UMR5 302 aa10.75□□□□□ -0.69
CMSS1-208ENST00000496116 SAMD4AQ9UPU9 718 aaKnown RBP10.75□□□□□ -0.69
CMSS1-208ENST00000496116 RUVBL1Q9Y265 456 aaKnown RBP10.75□□□□□ -0.69
CMSS1-208ENST00000496116 TMEM202A6NGA9 273 aa10.74□□□□□ -0.69
CMSS1-208ENST00000496116 H0YIV9 168 aa10.74□□□□□ -0.69
CMSS1-208ENST00000496116 ZNF701M0R085 212 aaPredicted RBP10.74□□□□□ -0.69
CMSS1-208ENST00000496116 PRAMEF4O60810 478 aa10.74□□□□□ -0.69
CMSS1-208ENST00000496116 CCNDBP1O95273 360 aa10.74□□□□□ -0.69
CMSS1-208ENST00000496116 SERPINA1P01009 418 aa10.74□□□□□ -0.69
CMSS1-208ENST00000496116 GSNP06396 782 aa10.74□□□□□ -0.69
CMSS1-208ENST00000496116 HOXB9P17482 250 aaPredicted RBP10.74□□□□□ -0.69
CMSS1-208ENST00000496116 SLC5A2P31639 672 aa10.74□□□□□ -0.69
CMSS1-208ENST00000496116 MMP12P39900 470 aa10.74□□□□□ -0.69
CMSS1-208ENST00000496116 GZMMP51124 257 aa10.74□□□□□ -0.69
CMSS1-208ENST00000496116 ACSM2AQ08AH3 577 aa10.74□□□□□ -0.69
CMSS1-208ENST00000496116 MTAPQ13126 283 aa10.74□□□□□ -0.69
CMSS1-208ENST00000496116 PLCL1Q15111 1095 aa10.74□□□□□ -0.69
CMSS1-208ENST00000496116 ZIK1Q3SY52 487 aaPredicted RBP10.74□□□□□ -0.69
CMSS1-208ENST00000496116 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.74□□□□□ -0.69
CMSS1-208ENST00000496116 PRSS36Q5K4E3 855 aa10.74□□□□□ -0.69
CMSS1-208ENST00000496116 ZNF648Q5T619 568 aaPredicted RBP10.74□□□□□ -0.69
CMSS1-208ENST00000496116 PRAMEF9Q5VWM5 478 aa10.74□□□□□ -0.69
CMSS1-208ENST00000496116 AP1ARQ63HQ0 302 aa10.74□□□□□ -0.69
CMSS1-208ENST00000496116 ACSM2BQ68CK6 577 aa10.74□□□□□ -0.69
CMSS1-208ENST00000496116 OR4F3Q6IEY1 312 aa10.74□□□□□ -0.69
CMSS1-208ENST00000496116 GRHL2Q6ISB3 625 aa10.74□□□□□ -0.69
CMSS1-208ENST00000496116 LIPIQ6XZB0 460 aa10.74□□□□□ -0.69
CMSS1-208ENST00000496116 SERPINA11Q86U17 422 aa10.74□□□□□ -0.69
CMSS1-208ENST00000496116 ERI1Q8IV48 349 aaKnown RBP10.74□□□□□ -0.69
CMSS1-208ENST00000496116 ZCCHC7Q8N3Z6 543 aaKnown RBP10.74□□□□□ -0.69
CMSS1-208ENST00000496116 RASGEF1AQ8N9B8 481 aa10.74□□□□□ -0.69
CMSS1-208ENST00000496116 ZNF555Q8NEP9 628 aa10.74□□□□□ -0.69
CMSS1-208ENST00000496116 GFM2Q969S9 779 aaKnown RBP10.74□□□□□ -0.69
CMSS1-208ENST00000496116 PYURFQ96I23 114 aa10.74□□□□□ -0.69
CMSS1-208ENST00000496116 HHIPQ96QV1 700 aa10.74□□□□□ -0.69
CMSS1-208ENST00000496116 PANX1Q96RD7 426 aa10.74□□□□□ -0.69
CMSS1-208ENST00000496116 RAD9AQ99638 391 aa10.74□□□□□ -0.69
CMSS1-208ENST00000496116 EBPLQ9BY08 206 aa10.74□□□□□ -0.69
CMSS1-208ENST00000496116 CARS2Q9HA77 564 aaKnown RBP10.74□□□□□ -0.69
CMSS1-208ENST00000496116 BRF2Q9HAW0 419 aa10.74□□□□□ -0.69
CMSS1-208ENST00000496116 TIMMDC1Q9NPL8 285 aa10.74□□□□□ -0.69
CMSS1-208ENST00000496116 DDX18Q9NVP1 670 aaKnown RBP10.74□□□□□ -0.69
CMSS1-208ENST00000496116 STOX2Q9P2F5 926 aaPredicted RBP10.74□□□□□ -0.69
CMSS1-208ENST00000496116 FBXO10Q9UK96 956 aa10.74□□□□□ -0.69
CMSS1-208ENST00000496116 MAPRE3Q9UPY8 281 aa10.74□□□□□ -0.69
CMSS1-208ENST00000496116 SLC5A10A0PJK1 596 aa10.73□□□□□ -0.69
CMSS1-208ENST00000496116 KRT87PA6NCN2 255 aa10.73□□□□□ -0.69
CMSS1-208ENST00000496116 E7EQ34 232 aa10.73□□□□□ -0.69
CMSS1-208ENST00000496116 FPGTO14772 594 aa10.73□□□□□ -0.69
CMSS1-208ENST00000496116 EPN2O95208 641 aa10.73□□□□□ -0.69
CMSS1-208ENST00000496116 COX7A2P14406 83 aa10.73□□□□□ -0.69
CMSS1-208ENST00000496116 PTPN6P29350 595 aa10.73□□□□□ -0.69
CMSS1-208ENST00000496116 CDKN2CP42773 168 aa10.73□□□□□ -0.69
CMSS1-208ENST00000496116 CTSCP53634 463 aa10.73□□□□□ -0.69
CMSS1-208ENST00000496116 VAC14Q08AM6 782 aa10.73□□□□□ -0.69
CMSS1-208ENST00000496116 NAE1Q13564 534 aa10.73□□□□□ -0.69
CMSS1-208ENST00000496116 DOC2AQ14183 400 aa10.73□□□□□ -0.69
CMSS1-208ENST00000496116 DHCR24Q15392 516 aa10.73□□□□□ -0.69
CMSS1-208ENST00000496116 DUOXA1Q1HG43 343 aa10.73□□□□□ -0.69
CMSS1-208ENST00000496116 POM121L1PQ3SYA9 428 aa10.73□□□□□ -0.69
CMSS1-208ENST00000496116 DOK6Q6PKX4 331 aa10.73□□□□□ -0.69
CMSS1-208ENST00000496116 GRASPQ7Z6J2 395 aaPredicted RBP10.73□□□□□ -0.69
CMSS1-208ENST00000496116 KLHDC8AQ8IYD2 350 aa10.73□□□□□ -0.69
CMSS1-208ENST00000496116 C8orf59Q8N0T1 100 aaPredicted RBP10.73□□□□□ -0.69
CMSS1-208ENST00000496116 OR5K1Q8NHB7 308 aa10.73□□□□□ -0.69
CMSS1-208ENST00000496116 NETO1Q8TDF5 533 aa10.73□□□□□ -0.69
CMSS1-208ENST00000496116 DTNBP1Q96EV8 351 aa10.73□□□□□ -0.69
CMSS1-208ENST00000496116 EGLN2Q96KS0 407 aa10.73□□□□□ -0.69
CMSS1-208ENST00000496116 MUS81Q96NY9 551 aa10.73□□□□□ -0.69
CMSS1-208ENST00000496116 OSBPL10Q9BXB5 764 aa10.73□□□□□ -0.69
CMSS1-208ENST00000496116 REXO4Q9GZR2 422 aaKnown RBP10.73□□□□□ -0.69
CMSS1-208ENST00000496116 EPHX3Q9H6B9 360 aa10.73□□□□□ -0.69
CMSS1-208ENST00000496116 SOX17Q9H6I2 414 aaPredicted RBP10.73□□□□□ -0.69
CMSS1-208ENST00000496116 PRM3Q9NNZ6 103 aa10.73□□□□□ -0.69
CMSS1-208ENST00000496116 SPATA6Q9NWH7 488 aaPredicted RBP10.73□□□□□ -0.69
CMSS1-208ENST00000496116 THG1LQ9NWX6 298 aaKnown RBP10.73□□□□□ -0.69
CMSS1-208ENST00000496116 FAM120CQ9NX05 1096 aaKnown RBP10.73□□□□□ -0.69
CMSS1-208ENST00000496116 USE1Q9NZ43 259 aa10.73□□□□□ -0.69
CMSS1-208ENST00000496116 GPRC5BQ9NZH0 403 aa10.73□□□□□ -0.69
CMSS1-208ENST00000496116 H0Y858 1186 aa10.73□□□□□ -0.69
CMSS1-208ENST00000496116 KPNA3O00505 521 aaPredicted RBP10.73□□□□□ -0.69
CMSS1-208ENST00000496116 E2F6O75461 281 aa10.73□□□□□ -0.69
CMSS1-208ENST00000496116 PRNPP04156 253 aa10.73□□□□□ -0.69
CMSS1-208ENST00000496116 ADH5P11766 374 aa10.73□□□□□ -0.69
CMSS1-208ENST00000496116 CD22P20273 847 aa10.73□□□□□ -0.69
CMSS1-208ENST00000496116 ASMTP46597 345 aa10.73□□□□□ -0.69
CMSS1-208ENST00000496116 HLCSP50747 726 aa10.73□□□□□ -0.69
CMSS1-208ENST00000496116 TPD52P55327 224 aaPredicted RBP10.73□□□□□ -0.69
CMSS1-208ENST00000496116 C21orf58P58505 322 aa10.73□□□□□ -0.69
CMSS1-208ENST00000496116 NTHL1P78549 312 aa10.73□□□□□ -0.69
CMSS1-208ENST00000496116 PPP2R2BQ00005 443 aa10.73□□□□□ -0.69
CMSS1-208ENST00000496116 UBE3AQ05086 875 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms