RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 CCDC188H7C350 402 aa23.19■■□□□ 1.3
HLA-C-209ENST00000495835 PYCARD-AS1I3L0S3 204 aa23.19■■□□□ 1.3
HLA-C-209ENST00000495835 PEX12O00623 359 aa23.19■■□□□ 1.3
HLA-C-209ENST00000495835 PDGFAP04085 211 aa23.19■■□□□ 1.3
HLA-C-209ENST00000495835 GNG11P61952 73 aa23.19■■□□□ 1.3
HLA-C-209ENST00000495835 ABATP80404 500 aa23.19■■□□□ 1.3
HLA-C-209ENST00000495835 FOXK1P85037 733 aa23.19■■□□□ 1.3
HLA-C-209ENST00000495835 PRDX1Q06830 199 aaKnown RBP23.19■■□□□ 1.3
HLA-C-209ENST00000495835 DHX9Q08211 1270 aaKnown RBP23.19■■□□□ 1.3
HLA-C-209ENST00000495835 ATP1A4Q13733 1029 aa23.19■■□□□ 1.3
HLA-C-209ENST00000495835 WASHC2DQ5SRD0 308 aa23.19■■□□□ 1.3
HLA-C-209ENST00000495835 FAM69BQ5VUD6 431 aa23.19■■□□□ 1.3
HLA-C-209ENST00000495835 MRGPREQ86SM8 312 aa23.19■■□□□ 1.3
HLA-C-209ENST00000495835 CNTN4Q8IWV2 1026 aa23.19■■□□□ 1.3
HLA-C-209ENST00000495835 PDIK1LQ8N165 341 aa23.19■■□□□ 1.3
HLA-C-209ENST00000495835 CD200R1Q8TD46 325 aa23.19■■□□□ 1.3
HLA-C-209ENST00000495835 LRRC39Q96DD0 335 aa23.19■■□□□ 1.3
HLA-C-209ENST00000495835 GPR21Q99679 349 aa23.19■■□□□ 1.3
HLA-C-209ENST00000495835 NAPGQ99747 312 aaPredicted RBP23.19■■□□□ 1.3
HLA-C-209ENST00000495835 DPH7Q9BTV6 452 aa23.19■■□□□ 1.3
HLA-C-209ENST00000495835 SLC22A11Q9NSA0 550 aa23.19■■□□□ 1.3
HLA-C-209ENST00000495835 IARS2Q9NSE4 1012 aaKnown RBP23.19■■□□□ 1.3
HLA-C-209ENST00000495835 NXT1Q9UKK6 140 aaKnown RBP23.19■■□□□ 1.3
HLA-C-209ENST00000495835 FLNBO75369 2602 aaKnown RBP23.18■■□□□ 1.3
HLA-C-209ENST00000495835 KRT87PA6NCN2 255 aa23.18■■□□□ 1.3
HLA-C-209ENST00000495835 ZIC2O95409 532 aaPredicted RBP23.18■■□□□ 1.3
HLA-C-209ENST00000495835 SLC16A8O95907 504 aa23.18■■□□□ 1.3
HLA-C-209ENST00000495835 OTX2P32243 289 aa23.18■■□□□ 1.3
HLA-C-209ENST00000495835 SOX8P57073 446 aa23.18■■□□□ 1.3
HLA-C-209ENST00000495835 VSX2P58304 361 aaPredicted RBP23.18■■□□□ 1.3
HLA-C-209ENST00000495835 PRMT9Q6P2P2 845 aa23.18■■□□□ 1.3
HLA-C-209ENST00000495835 FBXO42Q6P3S6 717 aa23.18■■□□□ 1.3
HLA-C-209ENST00000495835 CLEC1AQ8NC01 280 aa23.18■■□□□ 1.3
HLA-C-209ENST00000495835 ZNF480Q8WV37 535 aa23.18■■□□□ 1.3
HLA-C-209ENST00000495835 PLCD4Q9BRC7 762 aa23.18■■□□□ 1.3
HLA-C-209ENST00000495835 TAS2R13Q9NYV9 303 aa23.18■■□□□ 1.3
HLA-C-209ENST00000495835 C5AR2Q9P296 337 aa23.18■■□□□ 1.3
HLA-C-209ENST00000495835 TSR3Q9UJK0 312 aaKnown RBP23.18■■□□□ 1.3
HLA-C-209ENST00000495835 HEATR5BQ9P2D3 2071 aa23.18■■□□□ 1.3
HLA-C-209ENST00000495835 HYKKA2RU49 373 aa23.17■■□□□ 1.3
HLA-C-209ENST00000495835 USP27XA6NNY8 438 aa23.17■■□□□ 1.3
HLA-C-209ENST00000495835 E7ENX8 843 aa23.17■■□□□ 1.3
HLA-C-209ENST00000495835 CNOT3O75175 753 aaKnown RBP23.17■■□□□ 1.3
HLA-C-209ENST00000495835 RGS4P49798 205 aa23.17■■□□□ 1.3
HLA-C-209ENST00000495835 DR1Q01658 176 aa23.17■■□□□ 1.3
HLA-C-209ENST00000495835 TAP2Q03519 686 aa23.17■■□□□ 1.3
HLA-C-209ENST00000495835 CUL1Q13616 776 aa23.17■■□□□ 1.3
HLA-C-209ENST00000495835 ICE2Q659A1 982 aa23.17■■□□□ 1.3
HLA-C-209ENST00000495835 FRMPD2BQ6IN97 320 aa23.17■■□□□ 1.3
HLA-C-209ENST00000495835 SMAD5Q99717 465 aaKnown RBP23.17■■□□□ 1.3
HLA-C-209ENST00000495835 GPR83Q9NYM4 423 aa23.17■■□□□ 1.3
HLA-C-209ENST00000495835 TRMT6Q9UJA5 497 aaKnown RBP23.17■■□□□ 1.3
HLA-C-209ENST00000495835 TNRC6AQ8NDV7 1962 aaKnown RBP23.16■■□□□ 1.3
HLA-C-209ENST00000495835 A0A0J9YVX5 310 aa23.16■■□□□ 1.3
HLA-C-209ENST00000495835 NDC80O14777 642 aa23.16■■□□□ 1.3
HLA-C-209ENST00000495835 DPM1O60762 260 aa23.16■■□□□ 1.3
HLA-C-209ENST00000495835 ITGAXP20702 1163 aa23.16■■□□□ 1.3
HLA-C-209ENST00000495835 HRH2P25021 359 aa23.16■■□□□ 1.3
HLA-C-209ENST00000495835 MCM3P25205 808 aa23.16■■□□□ 1.3
HLA-C-209ENST00000495835 PAFAH1B1P43034 410 aa23.16■■□□□ 1.3
HLA-C-209ENST00000495835 MPP1Q00013 466 aa23.16■■□□□ 1.3
HLA-C-209ENST00000495835 MUM1Q2TAK8 710 aa23.16■■□□□ 1.3
HLA-C-209ENST00000495835 MSS51Q4VC12 460 aa23.16■■□□□ 1.3
HLA-C-209ENST00000495835 DCAF10Q5QP82 559 aa23.16■■□□□ 1.3
HLA-C-209ENST00000495835 SUSD1Q6UWL2 747 aa23.16■■□□□ 1.3
HLA-C-209ENST00000495835 PAQR7Q86WK9 346 aa23.16■■□□□ 1.3
HLA-C-209ENST00000495835 FDCSPQ8NFU4 85 aa23.16■■□□□ 1.3
HLA-C-209ENST00000495835 CERS2Q96G23 380 aa23.16■■□□□ 1.3
HLA-C-209ENST00000495835 VPS50Q96JG6 964 aa23.16■■□□□ 1.3
HLA-C-209ENST00000495835 ACAT2Q9BWD1 397 aa23.16■■□□□ 1.3
HLA-C-209ENST00000495835 SLC6A20Q9NP91 592 aa23.16■■□□□ 1.3
HLA-C-209ENST00000495835 P4HTMQ9NXG6 502 aa23.16■■□□□ 1.3
HLA-C-209ENST00000495835 ZC3H7BQ9UGR2 993 aaKnown RBP23.16■■□□□ 1.3
HLA-C-209ENST00000495835 CORO1CQ9ULV4 474 aaPredicted RBP23.16■■□□□ 1.3
HLA-C-209ENST00000495835 SETXQ7Z333 2677 aaKnown RBP23.15■■□□□ 1.3
HLA-C-209ENST00000495835 TXNDC9O14530 226 aa23.15■■□□□ 1.3
HLA-C-209ENST00000495835 UMODP07911 640 aa23.15■■□□□ 1.3
HLA-C-209ENST00000495835 ERVK-10P10266 1014 aa23.15■■□□□ 1.3
HLA-C-209ENST00000495835 EZRP15311 586 aaKnown RBP23.15■■□□□ 1.3
HLA-C-209ENST00000495835 MMP11P24347 488 aa23.15■■□□□ 1.3
HLA-C-209ENST00000495835 CD97P48960 835 aa23.15■■□□□ 1.3
HLA-C-209ENST00000495835 FRG1Q14331 258 aaKnown RBP23.15■■□□□ 1.3
HLA-C-209ENST00000495835 SLC9A5Q14940 896 aa23.15■■□□□ 1.3
HLA-C-209ENST00000495835 NKG7Q16617 165 aa23.15■■□□□ 1.3
HLA-C-209ENST00000495835 BBS9Q3SYG4 887 aa23.15■■□□□ 1.3
HLA-C-209ENST00000495835 ZNF425Q6IV72 752 aa23.15■■□□□ 1.3
HLA-C-209ENST00000495835 UBE2R2Q712K3 238 aaPredicted RBP23.15■■□□□ 1.3
HLA-C-209ENST00000495835 LRRC56Q8IYG6 542 aaPredicted RBP23.15■■□□□ 1.3
HLA-C-209ENST00000495835 CPNE9Q8IYJ1 553 aa23.15■■□□□ 1.3
HLA-C-209ENST00000495835 MCOLN3Q8TDD5 553 aa23.15■■□□□ 1.3
HLA-C-209ENST00000495835 MVB12AQ96EY5 273 aa23.15■■□□□ 1.3
HLA-C-209ENST00000495835 CAPZA3Q96KX2 299 aa23.15■■□□□ 1.3
HLA-C-209ENST00000495835 ZNF304Q9HCX3 659 aa23.15■■□□□ 1.3
HLA-C-209ENST00000495835 TAC3Q9UHF0 121 aa23.15■■□□□ 1.3
HLA-C-209ENST00000495835 CDC14AQ9UNH5 594 aa23.15■■□□□ 1.3
HLA-C-209ENST00000495835 NUP210LQ5VU65 1888 aa23.15■■□□□ 1.3
HLA-C-209ENST00000495835 LOC105369274A0A096LPK9 316 aa23.14■■□□□ 1.29
HLA-C-209ENST00000495835 LOC102723532A0A0G2JNH3 316 aa23.14■■□□□ 1.29
HLA-C-209ENST00000495835 AGPSO00116 658 aa23.14■■□□□ 1.29
HLA-C-209ENST00000495835 SLC16A5O15375 505 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms