RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 AFF3P51826 1226 aaKnown RBP9.95□□□□□ -0.82
HDAC3-214ENST00000495485 AP2B1P63010 937 aa9.95□□□□□ -0.82
HDAC3-214ENST00000495485 FOXM1Q08050 763 aa9.95□□□□□ -0.82
HDAC3-214ENST00000495485 DMPKQ09013 629 aa9.95□□□□□ -0.82
HDAC3-214ENST00000495485 CSTF3Q12996 717 aaKnown RBP9.95□□□□□ -0.82
HDAC3-214ENST00000495485 CHIT1Q13231 466 aa9.95□□□□□ -0.82
HDAC3-214ENST00000495485 PRKG2Q13237 762 aa9.95□□□□□ -0.82
HDAC3-214ENST00000495485 NAE1Q13564 534 aa9.95□□□□□ -0.82
HDAC3-214ENST00000495485 AP5B1Q2VPB7 878 aa9.95□□□□□ -0.82
HDAC3-214ENST00000495485 C18orf21Q32NC0 220 aaPredicted RBP9.95□□□□□ -0.82
HDAC3-214ENST00000495485 TMEM259Q4ZIN3 620 aa9.95□□□□□ -0.82
HDAC3-214ENST00000495485 XKR6Q5GH73 641 aa9.95□□□□□ -0.82
HDAC3-214ENST00000495485 PLA2G2CQ5R387 149 aa9.95□□□□□ -0.82
HDAC3-214ENST00000495485 C6orf136Q5SQH8 315 aa9.95□□□□□ -0.82
HDAC3-214ENST00000495485 METRNLQ641Q3 311 aa9.95□□□□□ -0.82
HDAC3-214ENST00000495485 AAGABQ6PD74 315 aa9.95□□□□□ -0.82
HDAC3-214ENST00000495485 SLC23A3Q6PIS1 610 aa9.95□□□□□ -0.82
HDAC3-214ENST00000495485 DOK6Q6PKX4 331 aa9.95□□□□□ -0.82
HDAC3-214ENST00000495485 TRIM74Q86UV6 250 aa9.95□□□□□ -0.82
HDAC3-214ENST00000495485 DCUN1D3Q8IWE4 304 aa9.95□□□□□ -0.82
HDAC3-214ENST00000495485 TBC1D21Q8IYX1 336 aa9.95□□□□□ -0.82
HDAC3-214ENST00000495485 DSELQ8IZU8 1212 aa9.95□□□□□ -0.82
HDAC3-214ENST00000495485 PLA2G15Q8NCC3 412 aa9.95□□□□□ -0.82
HDAC3-214ENST00000495485 OR56A3Q8NH54 315 aa9.95□□□□□ -0.82
HDAC3-214ENST00000495485 DNAJB8Q8NHS0 232 aa9.95□□□□□ -0.82
HDAC3-214ENST00000495485 STARD8Q92502 1023 aa9.95□□□□□ -0.82
HDAC3-214ENST00000495485 UTP4Q969X6 686 aaKnown RBP9.95□□□□□ -0.82
HDAC3-214ENST00000495485 RCN3Q96D15 328 aa9.95□□□□□ -0.82
HDAC3-214ENST00000495485 MED8Q96G25 268 aa9.95□□□□□ -0.82
HDAC3-214ENST00000495485 MARK4Q96L34 752 aa9.95□□□□□ -0.82
HDAC3-214ENST00000495485 CDK15Q96Q40 435 aa9.95□□□□□ -0.82
HDAC3-214ENST00000495485 PKP4Q99569 1192 aa9.95□□□□□ -0.82
HDAC3-214ENST00000495485 APOOQ9BUR5 198 aa9.95□□□□□ -0.82
HDAC3-214ENST00000495485 EFCAB11Q9BUY7 163 aa9.95□□□□□ -0.82
HDAC3-214ENST00000495485 ATG10Q9H0Y0 220 aa9.95□□□□□ -0.82
HDAC3-214ENST00000495485 SLC6A17Q9H1V8 727 aa9.95□□□□□ -0.82
HDAC3-214ENST00000495485 TRIT1Q9H3H1 467 aaKnown RBP9.95□□□□□ -0.82
HDAC3-214ENST00000495485 WDR41Q9HAD4 459 aa9.95□□□□□ -0.82
HDAC3-214ENST00000495485 C1orf109Q9NX04 203 aa9.95□□□□□ -0.82
HDAC3-214ENST00000495485 ASIC5Q9NY37 505 aa9.95□□□□□ -0.82
HDAC3-214ENST00000495485 SPATA7Q9P0W8 599 aa9.95□□□□□ -0.82
HDAC3-214ENST00000495485 ADGRE2Q9UHX3 823 aa9.95□□□□□ -0.82
HDAC3-214ENST00000495485 LEF1Q9UJU2 399 aaPredicted RBP9.95□□□□□ -0.82
HDAC3-214ENST00000495485 ZNF225Q9UK10 706 aa9.95□□□□□ -0.82
HDAC3-214ENST00000495485 CROTQ9UKG9 612 aa9.95□□□□□ -0.82
HDAC3-214ENST00000495485 PILRBQ9UKJ0 227 aa9.95□□□□□ -0.82
HDAC3-214ENST00000495485 ZFR2Q9UPR6 939 aaKnown RBP9.95□□□□□ -0.82
HDAC3-214ENST00000495485 ASF1AQ9Y294 204 aa9.95□□□□□ -0.82
HDAC3-214ENST00000495485 TMEM98Q9Y2Y6 226 aa9.95□□□□□ -0.82
HDAC3-214ENST00000495485 HEBP2Q9Y5Z4 205 aa9.95□□□□□ -0.82
HDAC3-214ENST00000495485 HS3ST3A1Q9Y663 406 aa9.95□□□□□ -0.82
HDAC3-214ENST00000495485 TP53BP1Q12888 1972 aaPredicted RBP9.94□□□□□ -0.82
HDAC3-214ENST00000495485 C15orf38-AP3S2A0A0A6YYH1 394 aa9.94□□□□□ -0.82
HDAC3-214ENST00000495485 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.94□□□□□ -0.82
HDAC3-214ENST00000495485 CCDC154A6NI56 674 aa9.94□□□□□ -0.82
HDAC3-214ENST00000495485 LSM1O15116 133 aaKnown RBP9.94□□□□□ -0.82
HDAC3-214ENST00000495485 BCAT2O15382 392 aaPredicted RBP9.94□□□□□ -0.82
HDAC3-214ENST00000495485 SYPP08247 313 aa9.94□□□□□ -0.82
HDAC3-214ENST00000495485 ALDOCP09972 364 aaKnown RBP9.94□□□□□ -0.82
HDAC3-214ENST00000495485 BCKDHBP21953 392 aa9.94□□□□□ -0.82
HDAC3-214ENST00000495485 HNRNPA2B1P22626 353 aaKnown RBP9.94□□□□□ -0.82
HDAC3-214ENST00000495485 ME2P23368 584 aa9.94□□□□□ -0.82
HDAC3-214ENST00000495485 PRPH2P23942 346 aa9.94□□□□□ -0.82
HDAC3-214ENST00000495485 PDHA2P29803 388 aa9.94□□□□□ -0.82
HDAC3-214ENST00000495485 MPLP40238 635 aa9.94□□□□□ -0.82
HDAC3-214ENST00000495485 CASP2P42575 452 aa9.94□□□□□ -0.82
HDAC3-214ENST00000495485 POLR2JP52435 117 aaKnown RBP9.94□□□□□ -0.82
HDAC3-214ENST00000495485 CLNS1AP54105 237 aaKnown RBP9.94□□□□□ -0.82
HDAC3-214ENST00000495485 KIAA1024LP59773 190 aa9.94□□□□□ -0.82
HDAC3-214ENST00000495485 PFN3P60673 137 aa9.94□□□□□ -0.82
HDAC3-214ENST00000495485 YPEL5P62699 121 aa9.94□□□□□ -0.82
HDAC3-214ENST00000495485 MAP7Q14244 749 aa9.94□□□□□ -0.82
HDAC3-214ENST00000495485 GRB7Q14451 532 aa9.94□□□□□ -0.82
HDAC3-214ENST00000495485 NFE2L1Q14494 772 aa9.94□□□□□ -0.82
HDAC3-214ENST00000495485 KRT33BQ14525 404 aa9.94□□□□□ -0.82
HDAC3-214ENST00000495485 ABRAXAS2Q15018 415 aa9.94□□□□□ -0.82
HDAC3-214ENST00000495485 CSRP2Q16527 193 aa9.94□□□□□ -0.82
HDAC3-214ENST00000495485 CPSF6Q16630 551 aaKnown RBP eCLIP9.94□□□□□ -0.82
HDAC3-214ENST00000495485 ZNF658BQ4V348 819 aaPredicted RBP9.94□□□□□ -0.82
HDAC3-214ENST00000495485 GRHL2Q6ISB3 625 aa9.94□□□□□ -0.82
HDAC3-214ENST00000495485 GK5Q6ZS86 529 aa9.94□□□□□ -0.82
HDAC3-214ENST00000495485 Q6ZSR9 355 aa9.94□□□□□ -0.82
HDAC3-214ENST00000495485 ARPINQ7Z6K5 226 aa9.94□□□□□ -0.82
HDAC3-214ENST00000495485 FAM124AQ86V42 546 aa9.94□□□□□ -0.82
HDAC3-214ENST00000495485 ZFAND4Q86XD8 727 aa9.94□□□□□ -0.82
HDAC3-214ENST00000495485 CACUL1Q86Y37 369 aa9.94□□□□□ -0.82
HDAC3-214ENST00000495485 SPNS2Q8IVW8 549 aa9.94□□□□□ -0.82
HDAC3-214ENST00000495485 TMEFF1Q8IYR6 380 aa9.94□□□□□ -0.82
HDAC3-214ENST00000495485 RGL4Q8IZJ4 473 aa9.94□□□□□ -0.82
HDAC3-214ENST00000495485 KRT78Q8N1N4 520 aa9.94□□□□□ -0.82
HDAC3-214ENST00000495485 TFGQ92734 400 aaPredicted RBP9.94□□□□□ -0.82
HDAC3-214ENST00000495485 USP7Q93009 1102 aa9.94□□□□□ -0.82
HDAC3-214ENST00000495485 BIRC7Q96CA5 298 aa9.94□□□□□ -0.82
HDAC3-214ENST00000495485 CMTM7Q96FZ5 175 aa9.94□□□□□ -0.82
HDAC3-214ENST00000495485 EHD1Q9H4M9 534 aa9.94□□□□□ -0.82
HDAC3-214ENST00000495485 BRF2Q9HAW0 419 aa9.94□□□□□ -0.82
HDAC3-214ENST00000495485 LRTM1Q9HBL6 345 aa9.94□□□□□ -0.82
HDAC3-214ENST00000495485 CCDC177Q9NQR7 707 aaPredicted RBP9.94□□□□□ -0.82
HDAC3-214ENST00000495485 SERGEFQ9UGK8 458 aa9.94□□□□□ -0.82
HDAC3-214ENST00000495485 MOSPD1Q9UJG1 213 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms