RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 DHRS4Q9BTZ2 278 aa11.63□□□□□ -0.55
CSNK1E-213ENST00000495232 ULBP3Q9BZM4 244 aa11.63□□□□□ -0.55
CSNK1E-213ENST00000495232 CHRNA10Q9GZZ6 450 aa11.63□□□□□ -0.55
CSNK1E-213ENST00000495232 ALG9Q9H6U8 611 aa11.63□□□□□ -0.55
CSNK1E-213ENST00000495232 CD274Q9NZQ7 290 aa11.63□□□□□ -0.55
CSNK1E-213ENST00000495232 FOXJ2Q9P0K8 574 aa11.63□□□□□ -0.55
CSNK1E-213ENST00000495232 TBK1Q9UHD2 729 aa11.63□□□□□ -0.55
CSNK1E-213ENST00000495232 IKZF3Q9UKT9 509 aa11.63□□□□□ -0.55
CSNK1E-213ENST00000495232 KLHL20Q9Y2M5 609 aa11.63□□□□□ -0.55
CSNK1E-213ENST00000495232 DMXL2Q8TDJ6 3036 aa11.62□□□□□ -0.55
CSNK1E-213ENST00000495232 CCDC189A1A4V9 331 aa11.62□□□□□ -0.55
CSNK1E-213ENST00000495232 SYCE1LA8MT33 242 aa11.62□□□□□ -0.55
CSNK1E-213ENST00000495232 SUPT3HB4E1H0 165 aa11.62□□□□□ -0.55
CSNK1E-213ENST00000495232 E7EQ34 232 aa11.62□□□□□ -0.55
CSNK1E-213ENST00000495232 TLX3O43711 291 aaPredicted RBP11.62□□□□□ -0.55
CSNK1E-213ENST00000495232 SUPT3HO75486 399 aa11.62□□□□□ -0.55
CSNK1E-213ENST00000495232 STK17BO94768 372 aa11.62□□□□□ -0.55
CSNK1E-213ENST00000495232 KLHL2O95198 593 aa11.62□□□□□ -0.55
CSNK1E-213ENST00000495232 TFEBP19484 476 aa11.62□□□□□ -0.55
CSNK1E-213ENST00000495232 HRH2P25021 359 aa11.62□□□□□ -0.55
CSNK1E-213ENST00000495232 GRIA3P42263 894 aa11.62□□□□□ -0.55
CSNK1E-213ENST00000495232 ITGA1P56199 1179 aa11.62□□□□□ -0.55
CSNK1E-213ENST00000495232 IRF9Q00978 393 aa11.62□□□□□ -0.55
CSNK1E-213ENST00000495232 ACAP2Q15057 778 aa11.62□□□□□ -0.55
CSNK1E-213ENST00000495232 OR4D1Q15615 310 aa11.62□□□□□ -0.55
CSNK1E-213ENST00000495232 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.62□□□□□ -0.55
CSNK1E-213ENST00000495232 C17orf64Q86WR6 236 aa11.62□□□□□ -0.55
CSNK1E-213ENST00000495232 ZFAND4Q86XD8 727 aa11.62□□□□□ -0.55
CSNK1E-213ENST00000495232 LRRC56Q8IYG6 542 aaPredicted RBP11.62□□□□□ -0.55
CSNK1E-213ENST00000495232 KCTD4Q8WVF5 259 aa11.62□□□□□ -0.55
CSNK1E-213ENST00000495232 KCNE4Q8WWG9 221 aa11.62□□□□□ -0.55
CSNK1E-213ENST00000495232 CAVIN3Q969G5 261 aa11.62□□□□□ -0.55
CSNK1E-213ENST00000495232 PMEPA1Q969W9 287 aa11.62□□□□□ -0.55
CSNK1E-213ENST00000495232 PTERQ96BW5 349 aa11.62□□□□□ -0.55
CSNK1E-213ENST00000495232 PYCR2Q96C36 320 aa11.62□□□□□ -0.55
CSNK1E-213ENST00000495232 NXNL1Q96CM4 212 aa11.62□□□□□ -0.55
CSNK1E-213ENST00000495232 ZNF501Q96CX3 271 aaPredicted RBP11.62□□□□□ -0.55
CSNK1E-213ENST00000495232 DPH7Q9BTV6 452 aa11.62□□□□□ -0.55
CSNK1E-213ENST00000495232 DPH1Q9BZG8 443 aa11.62□□□□□ -0.55
CSNK1E-213ENST00000495232 EPB41L4BQ9H329 900 aa11.62□□□□□ -0.55
CSNK1E-213ENST00000495232 CNOT10Q9H9A5 744 aaKnown RBP11.62□□□□□ -0.55
CSNK1E-213ENST00000495232 FAM60AQ9NP50 221 aa11.62□□□□□ -0.55
CSNK1E-213ENST00000495232 WWOXQ9NZC7 414 aa11.62□□□□□ -0.55
CSNK1E-213ENST00000495232 ANKMY1Q9P2S6 941 aa11.62□□□□□ -0.55
CSNK1E-213ENST00000495232 ACSL6Q9UKU0 697 aa11.62□□□□□ -0.55
CSNK1E-213ENST00000495232 RAB21Q9UL25 225 aa11.62□□□□□ -0.55
CSNK1E-213ENST00000495232 SNX7Q9UNH6 387 aa11.62□□□□□ -0.55
CSNK1E-213ENST00000495232 PLCL2Q9UPR0 1127 aa11.62□□□□□ -0.55
CSNK1E-213ENST00000495232 RAXQ9Y2V3 346 aa11.62□□□□□ -0.55
CSNK1E-213ENST00000495232 DYRK1BQ9Y463 629 aa11.62□□□□□ -0.55
CSNK1E-213ENST00000495232 ADAMTS20P59510 1910 aa11.62□□□□□ -0.55
CSNK1E-213ENST00000495232 SMIM23A6NLE4 172 aa11.61□□□□□ -0.55
CSNK1E-213ENST00000495232 SCRG1O75711 98 aa11.61□□□□□ -0.55
CSNK1E-213ENST00000495232 OR2B3O76000 313 aa11.61□□□□□ -0.55
CSNK1E-213ENST00000495232 KIAA0754O94854 1291 aa11.61□□□□□ -0.55
CSNK1E-213ENST00000495232 MT-ND3P03897 115 aa11.61□□□□□ -0.55
CSNK1E-213ENST00000495232 SHBGP04278 402 aa11.61□□□□□ -0.55
CSNK1E-213ENST00000495232 CAPNS1P04632 268 aa11.61□□□□□ -0.55
CSNK1E-213ENST00000495232 CCNYL3P0C7X3 344 aa11.61□□□□□ -0.55
CSNK1E-213ENST00000495232 LIPCP11150 499 aa11.61□□□□□ -0.55
CSNK1E-213ENST00000495232 COL6A2P12110 1019 aa11.61□□□□□ -0.55
CSNK1E-213ENST00000495232 GCAP28676 217 aa11.61□□□□□ -0.55
CSNK1E-213ENST00000495232 GRK3P35626 688 aa11.61□□□□□ -0.55
CSNK1E-213ENST00000495232 EIF2S3P41091 472 aaKnown RBP11.61□□□□□ -0.55
CSNK1E-213ENST00000495232 GLRBP48167 497 aa11.61□□□□□ -0.55
CSNK1E-213ENST00000495232 ATP1A2P50993 1020 aa11.61□□□□□ -0.55
CSNK1E-213ENST00000495232 ZIC1Q15915 447 aa11.61□□□□□ -0.55
CSNK1E-213ENST00000495232 TSNAXIP1Q2TAA8 658 aa11.61□□□□□ -0.55
CSNK1E-213ENST00000495232 DEFB110Q30KQ9 67 aa11.61□□□□□ -0.55
CSNK1E-213ENST00000495232 CDKL4Q5MAI5 379 aa11.61□□□□□ -0.55
CSNK1E-213ENST00000495232 BROXQ5VW32 411 aa11.61□□□□□ -0.55
CSNK1E-213ENST00000495232 FCRL6Q6DN72 434 aa11.61□□□□□ -0.55
CSNK1E-213ENST00000495232 SULT1C3Q6IMI6 304 aa11.61□□□□□ -0.55
CSNK1E-213ENST00000495232 PWWP2BQ6NUJ5 590 aa11.61□□□□□ -0.55
CSNK1E-213ENST00000495232 LCTLQ6UWM7 567 aa11.61□□□□□ -0.55
CSNK1E-213ENST00000495232 ISCA2Q86U28 154 aa11.61□□□□□ -0.55
CSNK1E-213ENST00000495232 MCATQ8IVS2 390 aaKnown RBP11.61□□□□□ -0.55
CSNK1E-213ENST00000495232 CENPLQ8N0S6 344 aaPredicted RBP11.61□□□□□ -0.55
CSNK1E-213ENST00000495232 DNAJC22Q8N4W6 341 aa11.61□□□□□ -0.55
CSNK1E-213ENST00000495232 IL22RA1Q8N6P7 574 aa11.61□□□□□ -0.55
CSNK1E-213ENST00000495232 OR56A3Q8NH54 315 aa11.61□□□□□ -0.55
CSNK1E-213ENST00000495232 RHEBL1Q8TAI7 183 aa11.61□□□□□ -0.55
CSNK1E-213ENST00000495232 ISL2Q96A47 359 aa11.61□□□□□ -0.55
CSNK1E-213ENST00000495232 RHBDF1Q96CC6 855 aa11.61□□□□□ -0.55
CSNK1E-213ENST00000495232 SCYL1Q96KG9 808 aa11.61□□□□□ -0.55
CSNK1E-213ENST00000495232 SELENOSQ9BQE4 189 aa11.61□□□□□ -0.55
CSNK1E-213ENST00000495232 PLCD4Q9BRC7 762 aa11.61□□□□□ -0.55
CSNK1E-213ENST00000495232 SGPP1Q9BX95 441 aa11.61□□□□□ -0.55
CSNK1E-213ENST00000495232 IGSF5Q9NSI5 407 aa11.61□□□□□ -0.55
CSNK1E-213ENST00000495232 ZMIZ1Q9ULJ6 1067 aa11.61□□□□□ -0.55
CSNK1E-213ENST00000495232 KLK4Q9Y5K2 254 aa11.61□□□□□ -0.55
CSNK1E-213ENST00000495232 SNRNP200O75643 2136 aaKnown RBP11.6□□□□□ -0.55
CSNK1E-213ENST00000495232 TLDC2A0PJX2 215 aa11.6□□□□□ -0.55
CSNK1E-213ENST00000495232 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.6□□□□□ -0.55
CSNK1E-213ENST00000495232 H7BY64 318 aa11.6□□□□□ -0.55
CSNK1E-213ENST00000495232 KLK10O43240 276 aa11.6□□□□□ -0.55
CSNK1E-213ENST00000495232 SRPX2O60687 465 aaPredicted RBP11.6□□□□□ -0.55
CSNK1E-213ENST00000495232 KERAO60938 352 aa11.6□□□□□ -0.55
CSNK1E-213ENST00000495232 CPNE3O75131 537 aaKnown RBP11.6□□□□□ -0.55
CSNK1E-213ENST00000495232 CDH16O75309 829 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms