RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 MED25Q71SY5 747 aa8.17□□□□□ -1.1
LRCH3-219ENST00000494069 OVCH1Q7RTY7 1134 aa8.17□□□□□ -1.1
LRCH3-219ENST00000494069 RAB43Q86YS6 212 aa8.17□□□□□ -1.1
LRCH3-219ENST00000494069 PPIL6Q8IXY8 311 aa8.17□□□□□ -1.1
LRCH3-219ENST00000494069 CPNE9Q8IYJ1 553 aa8.17□□□□□ -1.1
LRCH3-219ENST00000494069 RBMXL3Q8N7X1 1067 aaKnown RBP8.17□□□□□ -1.1
LRCH3-219ENST00000494069 OR2Y1Q8NGV0 311 aa8.17□□□□□ -1.1
LRCH3-219ENST00000494069 HMGCLL1Q8TB92 370 aa8.17□□□□□ -1.1
LRCH3-219ENST00000494069 ZUFSPQ96AP4 578 aa8.17□□□□□ -1.1
LRCH3-219ENST00000494069 FOPNLQ96NB1 174 aa8.17□□□□□ -1.1
LRCH3-219ENST00000494069 NDNQ99608 321 aa8.17□□□□□ -1.1
LRCH3-219ENST00000494069 GPR21Q99679 349 aa8.17□□□□□ -1.1
LRCH3-219ENST00000494069 SELENOSQ9BQE4 189 aa8.17□□□□□ -1.1
LRCH3-219ENST00000494069 PLAC1Q9HBJ0 212 aa8.17□□□□□ -1.1
LRCH3-219ENST00000494069 XAB2Q9HCS7 855 aaKnown RBP8.17□□□□□ -1.1
LRCH3-219ENST00000494069 IARS2Q9NSE4 1012 aaKnown RBP8.17□□□□□ -1.1
LRCH3-219ENST00000494069 CUTCQ9NTM9 273 aa8.17□□□□□ -1.1
LRCH3-219ENST00000494069 ABCF3Q9NUQ8 709 aa8.17□□□□□ -1.1
LRCH3-219ENST00000494069 INTS7Q9NVH2 962 aaKnown RBP8.17□□□□□ -1.1
LRCH3-219ENST00000494069 INTS10Q9NVR2 710 aaKnown RBP8.17□□□□□ -1.1
LRCH3-219ENST00000494069 P4HTMQ9NXG6 502 aa8.17□□□□□ -1.1
LRCH3-219ENST00000494069 SPATA7Q9P0W8 599 aa8.17□□□□□ -1.1
LRCH3-219ENST00000494069 CTSFQ9UBX1 484 aa8.17□□□□□ -1.1
LRCH3-219ENST00000494069 ZC3H7BQ9UGR2 993 aaKnown RBP8.17□□□□□ -1.1
LRCH3-219ENST00000494069 FBXO5Q9UKT4 447 aa8.17□□□□□ -1.1
LRCH3-219ENST00000494069 SRPK3Q9UPE1 567 aa8.17□□□□□ -1.1
LRCH3-219ENST00000494069 PADI2Q9Y2J8 665 aa8.17□□□□□ -1.1
LRCH3-219ENST00000494069 A0A1B0GX78 115 aa8.16□□□□□ -1.1
LRCH3-219ENST00000494069 HYKKA2RU49 373 aa8.16□□□□□ -1.1
LRCH3-219ENST00000494069 OR2A25A4D2G3 310 aa8.16□□□□□ -1.1
LRCH3-219ENST00000494069 FITM1A5D6W6 292 aa8.16□□□□□ -1.1
LRCH3-219ENST00000494069 TTLL8A6PVC2 850 aa8.16□□□□□ -1.1
LRCH3-219ENST00000494069 H0YGG7 62 aa8.16□□□□□ -1.1
LRCH3-219ENST00000494069 FFAR3O14843 346 aa8.16□□□□□ -1.1
LRCH3-219ENST00000494069 DSCR3O14972 297 aa8.16□□□□□ -1.1
LRCH3-219ENST00000494069 PFDN6O15212 129 aa8.16□□□□□ -1.1
LRCH3-219ENST00000494069 GPR42O15529 346 aa8.16□□□□□ -1.1
LRCH3-219ENST00000494069 SLC16A8O95907 504 aa8.16□□□□□ -1.1
LRCH3-219ENST00000494069 SYF2O95926 243 aaKnown RBP8.16□□□□□ -1.1
LRCH3-219ENST00000494069 ONECUT2O95948 504 aa8.16□□□□□ -1.1
LRCH3-219ENST00000494069 STATHP02808 62 aa8.16□□□□□ -1.1
LRCH3-219ENST00000494069 IVDP26440 423 aa8.16□□□□□ -1.1
LRCH3-219ENST00000494069 GABRB3P28472 473 aa8.16□□□□□ -1.1
LRCH3-219ENST00000494069 CD97P48960 835 aa8.16□□□□□ -1.1
LRCH3-219ENST00000494069 PNLIPRP1P54315 467 aa8.16□□□□□ -1.1
LRCH3-219ENST00000494069 ARSFP54793 590 aa8.16□□□□□ -1.1
LRCH3-219ENST00000494069 ARF3P61204 181 aaPredicted RBP8.16□□□□□ -1.1
LRCH3-219ENST00000494069 GRM7Q14831 915 aa8.16□□□□□ -1.1
LRCH3-219ENST00000494069 PPP1R7Q15435 360 aa8.16□□□□□ -1.1
LRCH3-219ENST00000494069 NKG7Q16617 165 aa8.16□□□□□ -1.1
LRCH3-219ENST00000494069 DCAF10Q5QP82 559 aa8.16□□□□□ -1.1
LRCH3-219ENST00000494069 RNF44Q7L0R7 432 aa8.16□□□□□ -1.1
LRCH3-219ENST00000494069 PIWIL4Q7Z3Z4 852 aaKnown RBP8.16□□□□□ -1.1
LRCH3-219ENST00000494069 PRSS58Q8IYP2 241 aa8.16□□□□□ -1.1
LRCH3-219ENST00000494069 SHISA5Q8N114 240 aa8.16□□□□□ -1.1
LRCH3-219ENST00000494069 RAB42Q8N4Z0 105 aa8.16□□□□□ -1.1
LRCH3-219ENST00000494069 AMER2Q8N7J2 671 aa8.16□□□□□ -1.1
LRCH3-219ENST00000494069 TMEM102Q8N9M5 508 aaPredicted RBP8.16□□□□□ -1.1
LRCH3-219ENST00000494069 Q8NA96 180 aa8.16□□□□□ -1.1
LRCH3-219ENST00000494069 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.16□□□□□ -1.1
LRCH3-219ENST00000494069 CD200R1Q8TD46 325 aa8.16□□□□□ -1.1
LRCH3-219ENST00000494069 MAGEC3Q8TD91 643 aa8.16□□□□□ -1.1
LRCH3-219ENST00000494069 ZNF480Q8WV37 535 aa8.16□□□□□ -1.1
LRCH3-219ENST00000494069 ASB11Q8WXH4 323 aa8.16□□□□□ -1.1
LRCH3-219ENST00000494069 SMPDL3AQ92484 453 aa8.16□□□□□ -1.1
LRCH3-219ENST00000494069 DLG3Q92796 817 aa8.16□□□□□ -1.1
LRCH3-219ENST00000494069 PTERQ96BW5 349 aa8.16□□□□□ -1.1
LRCH3-219ENST00000494069 CAPZA3Q96KX2 299 aa8.16□□□□□ -1.1
LRCH3-219ENST00000494069 NAP1L3Q99457 506 aaPredicted RBP8.16□□□□□ -1.1
LRCH3-219ENST00000494069 SPSB2Q99619 263 aa8.16□□□□□ -1.1
LRCH3-219ENST00000494069 WDR83Q9BRX9 315 aaKnown RBP8.16□□□□□ -1.1
LRCH3-219ENST00000494069 AARSD1Q9BTE6 412 aaKnown RBP8.16□□□□□ -1.1
LRCH3-219ENST00000494069 DPH7Q9BTV6 452 aa8.16□□□□□ -1.1
LRCH3-219ENST00000494069 RAB11FIP5Q9BXF6 653 aa8.16□□□□□ -1.1
LRCH3-219ENST00000494069 SOX17Q9H6I2 414 aaPredicted RBP8.16□□□□□ -1.1
LRCH3-219ENST00000494069 ZBTB20Q9HC78 741 aaPredicted RBP8.16□□□□□ -1.1
LRCH3-219ENST00000494069 GPR83Q9NYM4 423 aa8.16□□□□□ -1.1
LRCH3-219ENST00000494069 ASIC3Q9UHC3 531 aa8.16□□□□□ -1.1
LRCH3-219ENST00000494069 TAC3Q9UHF0 121 aa8.16□□□□□ -1.1
LRCH3-219ENST00000494069 HECTD1Q9ULT8 2610 aa8.16□□□□□ -1.1
LRCH3-219ENST00000494069 PYCARDQ9ULZ3 195 aa8.16□□□□□ -1.1
LRCH3-219ENST00000494069 DHRS7Q9Y394 339 aa8.16□□□□□ -1.1
LRCH3-219ENST00000494069 ZNF451Q9Y4E5 1061 aa8.16□□□□□ -1.1
LRCH3-219ENST00000494069 KLK4Q9Y5K2 254 aa8.16□□□□□ -1.1
LRCH3-219ENST00000494069 FAM169AQ9Y6X4 670 aa8.16□□□□□ -1.1
LRCH3-219ENST00000494069 FLNCQ14315 2725 aa8.16□□□□□ -1.1
LRCH3-219ENST00000494069 GOLGA6L10A0A0M3HER8 536 aa8.15□□□□□ -1.1
LRCH3-219ENST00000494069 E7ENX8 843 aa8.15□□□□□ -1.1
LRCH3-219ENST00000494069 GFYI3L273 518 aa8.15□□□□□ -1.1
LRCH3-219ENST00000494069 PEX12O00623 359 aa8.15□□□□□ -1.1
LRCH3-219ENST00000494069 CES2O00748 559 aa8.15□□□□□ -1.1
LRCH3-219ENST00000494069 SOCS6O14544 535 aa8.15□□□□□ -1.1
LRCH3-219ENST00000494069 DNALI1O14645 258 aaPredicted RBP8.15□□□□□ -1.1
LRCH3-219ENST00000494069 FANCGO15287 622 aa8.15□□□□□ -1.1
LRCH3-219ENST00000494069 ZSCAN12O43309 604 aa8.15□□□□□ -1.1
LRCH3-219ENST00000494069 SRPX2O60687 465 aaPredicted RBP8.15□□□□□ -1.1
LRCH3-219ENST00000494069 SORBS2O94875 1100 aaKnown RBP8.15□□□□□ -1.1
LRCH3-219ENST00000494069 CATP04040 527 aaKnown RBP8.15□□□□□ -1.1
LRCH3-219ENST00000494069 MPC1LP0DKB6 136 aa8.15□□□□□ -1.1
LRCH3-219ENST00000494069 GNLYP22749 145 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms