RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 TRIP6Q15654 476 aaKnown RBP12□□□□□ -0.49
SNX17-208ENST00000493711 ZNF678Q5SXM1 525 aa12□□□□□ -0.49
SNX17-208ENST00000493711 PRAMEF13Q5VWM6 474 aa12□□□□□ -0.49
SNX17-208ENST00000493711 ATG16L1Q676U5 607 aa12□□□□□ -0.49
SNX17-208ENST00000493711 C17orf64Q86WR6 236 aa12□□□□□ -0.49
SNX17-208ENST00000493711 C10orf107Q8IVU9 208 aa12□□□□□ -0.49
SNX17-208ENST00000493711 TBC1D19Q8N5T2 526 aa12□□□□□ -0.49
SNX17-208ENST00000493711 Q8N9G6 341 aaPredicted RBP12□□□□□ -0.49
SNX17-208ENST00000493711 SNX31Q8N9S9 440 aa12□□□□□ -0.49
SNX17-208ENST00000493711 DYDC1Q8WWB3 177 aa12□□□□□ -0.49
SNX17-208ENST00000493711 CNDP1Q96KN2 507 aa12□□□□□ -0.49
SNX17-208ENST00000493711 PAIP2Q9BPZ3 127 aaKnown RBP12□□□□□ -0.49
SNX17-208ENST00000493711 TMEM79Q9BSE2 394 aa12□□□□□ -0.49
SNX17-208ENST00000493711 PITHD1Q9GZP4 211 aaPredicted RBP12□□□□□ -0.49
SNX17-208ENST00000493711 ZMYND15Q9H091 742 aa12□□□□□ -0.49
SNX17-208ENST00000493711 C12orf65Q9H3J6 166 aaKnown RBP12□□□□□ -0.49
SNX17-208ENST00000493711 LRRN3Q9H3W5 708 aa12□□□□□ -0.49
SNX17-208ENST00000493711 EHD1Q9H4M9 534 aa12□□□□□ -0.49
SNX17-208ENST00000493711 EML4Q9HC35 981 aaKnown RBP12□□□□□ -0.49
SNX17-208ENST00000493711 ACTR10Q9NZ32 417 aa12□□□□□ -0.49
SNX17-208ENST00000493711 CIDEBQ9UHD4 219 aa12□□□□□ -0.49
SNX17-208ENST00000493711 PCTPQ9UKL6 214 aa12□□□□□ -0.49
SNX17-208ENST00000493711 POMT2Q9UKY4 750 aa12□□□□□ -0.49
SNX17-208ENST00000493711 SNX7Q9UNH6 387 aa12□□□□□ -0.49
SNX17-208ENST00000493711 OTOGLQ3ZCN5 2332 aa12□□□□□ -0.49
SNX17-208ENST00000493711 ACACBO00763 2458 aa11.99□□□□□ -0.49
SNX17-208ENST00000493711 A0A1W2PPV9 198 aa11.99□□□□□ -0.49
SNX17-208ENST00000493711 TMEM114B3SHH9 223 aa11.99□□□□□ -0.49
SNX17-208ENST00000493711 TMX2-CTNND1H3BSU7 103 aa11.99□□□□□ -0.49
SNX17-208ENST00000493711 SLC30A4O14863 429 aa11.99□□□□□ -0.49
SNX17-208ENST00000493711 NPHS1O60500 1241 aa11.99□□□□□ -0.49
SNX17-208ENST00000493711 UGDHO60701 494 aa11.99□□□□□ -0.49
SNX17-208ENST00000493711 RFPL3O75679 317 aa11.99□□□□□ -0.49
SNX17-208ENST00000493711 SUPT7LO94864 414 aa11.99□□□□□ -0.49
SNX17-208ENST00000493711 OTCP00480 354 aa11.99□□□□□ -0.49
SNX17-208ENST00000493711 C9P02748 559 aa11.99□□□□□ -0.49
SNX17-208ENST00000493711 SERPINE1P05121 402 aa11.99□□□□□ -0.49
SNX17-208ENST00000493711 RPLP0P05388 317 aaKnown RBP11.99□□□□□ -0.49
SNX17-208ENST00000493711 RPS17P08708 135 aaKnown RBP11.99□□□□□ -0.49
SNX17-208ENST00000493711 CHN1P15882 459 aa11.99□□□□□ -0.49
SNX17-208ENST00000493711 NPPBP16860 134 aa11.99□□□□□ -0.49
SNX17-208ENST00000493711 TYRP1P17643 537 aa11.99□□□□□ -0.49
SNX17-208ENST00000493711 CXCR2P25025 360 aa11.99□□□□□ -0.49
SNX17-208ENST00000493711 PRDX3P30048 256 aaKnown RBP11.99□□□□□ -0.49
SNX17-208ENST00000493711 ACADVLP49748 655 aa11.99□□□□□ -0.49
SNX17-208ENST00000493711 NAGLUP54802 743 aa11.99□□□□□ -0.49
SNX17-208ENST00000493711 WDR4P57081 412 aaKnown RBP11.99□□□□□ -0.49
SNX17-208ENST00000493711 RELAQ04206 551 aa11.99□□□□□ -0.49
SNX17-208ENST00000493711 PRDX1Q06830 199 aaKnown RBP11.99□□□□□ -0.49
SNX17-208ENST00000493711 GALNT1Q10472 559 aaPredicted RBP11.99□□□□□ -0.49
SNX17-208ENST00000493711 TSTA3Q13630 321 aaPredicted RBP11.99□□□□□ -0.49
SNX17-208ENST00000493711 GTF2H2Q13888 395 aa11.99□□□□□ -0.49
SNX17-208ENST00000493711 AMZ1Q400G9 498 aa11.99□□□□□ -0.49
SNX17-208ENST00000493711 PERM1Q5SV97 790 aa11.99□□□□□ -0.49
SNX17-208ENST00000493711 ICE2Q659A1 982 aa11.99□□□□□ -0.49
SNX17-208ENST00000493711 GTF2H2CQ6P1K8 395 aa11.99□□□□□ -0.49
SNX17-208ENST00000493711 SPESP1Q6UW49 350 aa11.99□□□□□ -0.49
SNX17-208ENST00000493711 TAX1BP1Q86VP1 789 aa11.99□□□□□ -0.49
SNX17-208ENST00000493711 ZNF761Q86XN6 746 aaPredicted RBP11.99□□□□□ -0.49
SNX17-208ENST00000493711 KMT5CQ86Y97 462 aa11.99□□□□□ -0.49
SNX17-208ENST00000493711 CHCHD4Q8N4Q1 142 aa11.99□□□□□ -0.49
SNX17-208ENST00000493711 TEX9Q8N6V9 391 aa11.99□□□□□ -0.49
SNX17-208ENST00000493711 CCNYL1Q8N7R7 359 aa11.99□□□□□ -0.49
SNX17-208ENST00000493711 OR2A1Q8NGT9 310 aa11.99□□□□□ -0.49
SNX17-208ENST00000493711 MGARPQ8TDB4 240 aa11.99□□□□□ -0.49
SNX17-208ENST00000493711 ZNF483Q8TF39 744 aaPredicted RBP11.99□□□□□ -0.49
SNX17-208ENST00000493711 JPH3Q8WXH2 748 aaPredicted RBP11.99□□□□□ -0.49
SNX17-208ENST00000493711 NCSTNQ92542 709 aa11.99□□□□□ -0.49
SNX17-208ENST00000493711 ZUFSPQ96AP4 578 aa11.99□□□□□ -0.49
SNX17-208ENST00000493711 OR2A14Q96R47 310 aa11.99□□□□□ -0.49
SNX17-208ENST00000493711 GFM1Q96RP9 751 aaKnown RBP11.99□□□□□ -0.49
SNX17-208ENST00000493711 PELI2Q9HAT8 420 aa11.99□□□□□ -0.49
SNX17-208ENST00000493711 MRPS30Q9NP92 439 aaKnown RBP11.99□□□□□ -0.49
SNX17-208ENST00000493711 C1GALT1Q9NS00 363 aa11.99□□□□□ -0.49
SNX17-208ENST00000493711 OGFRQ9NZT2 677 aa11.99□□□□□ -0.49
SNX17-208ENST00000493711 CDV3Q9UKY7 258 aaKnown RBP11.99□□□□□ -0.49
SNX17-208ENST00000493711 APOBEC2Q9Y235 224 aaKnown RBP11.99□□□□□ -0.49
SNX17-208ENST00000493711 SLC22A14Q9Y267 594 aa11.99□□□□□ -0.49
SNX17-208ENST00000493711 KLK4Q9Y5K2 254 aa11.99□□□□□ -0.49
SNX17-208ENST00000493711 MN1Q10571 1320 aaPredicted RBP11.98□□□□□ -0.49
SNX17-208ENST00000493711 A0A0J9YY10 115 aa11.98□□□□□ -0.49
SNX17-208ENST00000493711 KRT87PA6NCN2 255 aa11.98□□□□□ -0.49
SNX17-208ENST00000493711 TLCD2A6NGC4 264 aa11.98□□□□□ -0.49
SNX17-208ENST00000493711 NTN3O00634 580 aaPredicted RBP11.98□□□□□ -0.49
SNX17-208ENST00000493711 E2F3O00716 465 aa11.98□□□□□ -0.49
SNX17-208ENST00000493711 KLF11O14901 512 aa11.98□□□□□ -0.49
SNX17-208ENST00000493711 CAPN5O15484 640 aaPredicted RBP11.98□□□□□ -0.49
SNX17-208ENST00000493711 MYF5P13349 255 aa11.98□□□□□ -0.49
SNX17-208ENST00000493711 CEACAM1P13688 526 aa11.98□□□□□ -0.49
SNX17-208ENST00000493711 UGT2B7P16662 529 aa11.98□□□□□ -0.49
SNX17-208ENST00000493711 CASP2P42575 452 aa11.98□□□□□ -0.49
SNX17-208ENST00000493711 GDF5P43026 501 aa11.98□□□□□ -0.49
SNX17-208ENST00000493711 AGTR2P50052 363 aa11.98□□□□□ -0.49
SNX17-208ENST00000493711 CCR8P51685 355 aa11.98□□□□□ -0.49
SNX17-208ENST00000493711 PKNOX1P55347 436 aa11.98□□□□□ -0.49
SNX17-208ENST00000493711 CCL7P80098 99 aa11.98□□□□□ -0.49
SNX17-208ENST00000493711 LCP2Q13094 533 aa11.98□□□□□ -0.49
SNX17-208ENST00000493711 LAPTM5Q13571 262 aa11.98□□□□□ -0.49
SNX17-208ENST00000493711 TRA2AQ13595 282 aaKnown RBP eCLIP11.98□□□□□ -0.49
SNX17-208ENST00000493711 SPIDRQ14159 915 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms