RNA–Protein interactions for RNA: ENST00000493583.5

TFE3-204, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

TSL 2

Gene TFE3, Length 3,279 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-204ENST00000493583 ZNF639Q9UID6 485 aa13.44□□□□□ -0.26
TFE3-204ENST00000493583 TNFRSF10BO14763 440 aa13.44□□□□□ -0.26
TFE3-204ENST00000493583 NDST3O95803 873 aa13.44□□□□□ -0.26
TFE3-204ENST00000493583 PRLP01236 227 aa13.44□□□□□ -0.26
TFE3-204ENST00000493583 CKMT1AP12532 417 aa13.44□□□□□ -0.26
TFE3-204ENST00000493583 RHOQP17081 205 aa13.44□□□□□ -0.26
TFE3-204ENST00000493583 CDC42EP1Q00587 391 aa13.44□□□□□ -0.26
TFE3-204ENST00000493583 NFKB2Q00653 900 aa13.44□□□□□ -0.26
TFE3-204ENST00000493583 TAF12Q16514 161 aa13.44□□□□□ -0.26
TFE3-204ENST00000493583 LRIT3Q3SXY7 679 aa13.44□□□□□ -0.26
TFE3-204ENST00000493583 DYNC2LI1Q8TCX1 351 aa13.44□□□□□ -0.26
TFE3-204ENST00000493583 TMEM203Q969S6 136 aa13.44□□□□□ -0.26
TFE3-204ENST00000493583 COPS4Q9BT78 406 aa13.44□□□□□ -0.26
TFE3-204ENST00000493583 BRINP2Q9C0B6 783 aa13.44□□□□□ -0.26
TFE3-204ENST00000493583 LRTM1Q9HBL6 345 aa13.44□□□□□ -0.26
TFE3-204ENST00000493583 NEK6Q9HC98 313 aa13.44□□□□□ -0.26
TFE3-204ENST00000493583 COQ3Q9NZJ6 369 aa13.44□□□□□ -0.26
TFE3-204ENST00000493583 ARIH1Q9Y4X5 557 aaPredicted RBP13.44□□□□□ -0.26
TFE3-204ENST00000493583 J3KTA2 159 aa13.43□□□□□ -0.26
TFE3-204ENST00000493583 SAP18O00422 153 aaKnown RBP13.43□□□□□ -0.26
TFE3-204ENST00000493583 RFXANKO14593 260 aa13.43□□□□□ -0.26
TFE3-204ENST00000493583 ANKRD28O15084 1053 aa13.43□□□□□ -0.26
TFE3-204ENST00000493583 KPNA5O15131 536 aa13.43□□□□□ -0.26
TFE3-204ENST00000493583 TAPBPO15533 448 aa13.43□□□□□ -0.26
TFE3-204ENST00000493583 CYP2C18P33260 490 aa13.43□□□□□ -0.26
TFE3-204ENST00000493583 S100A3P33764 101 aa13.43□□□□□ -0.26
TFE3-204ENST00000493583 FCGRTP55899 365 aa13.43□□□□□ -0.26
TFE3-204ENST00000493583 SMU1Q2TAY7 513 aa13.43□□□□□ -0.26
TFE3-204ENST00000493583 POM121L1PQ3SYA9 428 aa13.43□□□□□ -0.26
TFE3-204ENST00000493583 CPZQ66K79 652 aa13.43□□□□□ -0.26
TFE3-204ENST00000493583 FAM171BQ6P995 826 aa13.43□□□□□ -0.26
TFE3-204ENST00000493583 MEX3DQ86XN8 651 aaKnown RBP13.43□□□□□ -0.26
TFE3-204ENST00000493583 DBF4BQ8NFT6 615 aa13.43□□□□□ -0.26
TFE3-204ENST00000493583 RHEBL1Q8TAI7 183 aa13.43□□□□□ -0.26
TFE3-204ENST00000493583 CD99L2Q8TCZ2 262 aa13.43□□□□□ -0.26
TFE3-204ENST00000493583 NELL1Q92832 810 aa13.43□□□□□ -0.26
TFE3-204ENST00000493583 APIPQ96GX9 242 aa13.43□□□□□ -0.26
TFE3-204ENST00000493583 PANX1Q96RD7 426 aa13.43□□□□□ -0.26
TFE3-204ENST00000493583 MMP28Q9H239 520 aa13.43□□□□□ -0.26
TFE3-204ENST00000493583 ASB8Q9H765 288 aa13.43□□□□□ -0.26
TFE3-204ENST00000493583 TIGARQ9NQ88 270 aa13.43□□□□□ -0.26
TFE3-204ENST00000493583 ZIM2Q9NZV7 527 aa13.43□□□□□ -0.26
TFE3-204ENST00000493583 MALT1Q9UDY8 824 aa13.43□□□□□ -0.26
TFE3-204ENST00000493583 IFRD1O00458 451 aaPredicted RBP13.43□□□□□ -0.26
TFE3-204ENST00000493583 TULP3O75386 442 aa13.43□□□□□ -0.26
TFE3-204ENST00000493583 FGF1P05230 155 aa13.43□□□□□ -0.26
TFE3-204ENST00000493583 PRR35P0CG20 571 aa13.43□□□□□ -0.26
TFE3-204ENST00000493583 GRK3P35626 688 aa13.43□□□□□ -0.26
TFE3-204ENST00000493583 SLC19A1P41440 591 aa13.43□□□□□ -0.26
TFE3-204ENST00000493583 ILF2Q12905 390 aaKnown RBP13.43□□□□□ -0.26
TFE3-204ENST00000493583 TUSC3Q13454 348 aa13.43□□□□□ -0.26
TFE3-204ENST00000493583 E2F2Q14209 437 aa13.43□□□□□ -0.26
TFE3-204ENST00000493583 TPRG1LQ5T0D9 272 aa13.43□□□□□ -0.26
TFE3-204ENST00000493583 CD300LGQ6UXG3 332 aa13.43□□□□□ -0.26
TFE3-204ENST00000493583 UMODL1-AS1Q8N2C9 162 aa13.43□□□□□ -0.26
TFE3-204ENST00000493583 IL4I1Q96RQ9 567 aa13.43□□□□□ -0.26
TFE3-204ENST00000493583 EHD3Q9NZN3 535 aa13.43□□□□□ -0.26
TFE3-204ENST00000493583 OPTCQ9UBM4 332 aa13.43□□□□□ -0.26
TFE3-204ENST00000493583 TANC1Q9C0D5 1861 aa13.43□□□□□ -0.26
TFE3-204ENST00000493583 TET1Q8NFU7 2136 aa13.43□□□□□ -0.26
TFE3-204ENST00000493583 PCM1Q15154 2024 aa13.43□□□□□ -0.26
TFE3-204ENST00000493583 CNTRLQ7Z7A1 2325 aa13.42□□□□□ -0.26
TFE3-204ENST00000493583 RFPL2O75678 378 aa13.42□□□□□ -0.26
TFE3-204ENST00000493583 PDYNP01213 254 aa13.42□□□□□ -0.26
TFE3-204ENST00000493583 IFI30P13284 250 aa13.42□□□□□ -0.26
TFE3-204ENST00000493583 PTNP21246 168 aa13.42□□□□□ -0.26
TFE3-204ENST00000493583 BOP1Q14137 746 aaKnown RBP13.42□□□□□ -0.26
TFE3-204ENST00000493583 XKR4Q5GH76 650 aa13.42□□□□□ -0.26
TFE3-204ENST00000493583 CLLU1OSQ5K130 101 aa13.42□□□□□ -0.26
TFE3-204ENST00000493583 METTL4Q8N3J2 472 aa13.42□□□□□ -0.26
TFE3-204ENST00000493583 OR5K1Q8NHB7 308 aa13.42□□□□□ -0.26
TFE3-204ENST00000493583 CHD7Q9P2D1 2997 aa13.42□□□□□ -0.26
TFE3-204ENST00000493583 PDCD11Q14690 1871 aaKnown RBP13.42□□□□□ -0.26
TFE3-204ENST00000493583 CKAP5Q14008 2032 aa13.42□□□□□ -0.26
TFE3-204ENST00000493583 PCP4L1A6NKN8 68 aa13.42□□□□□ -0.26
TFE3-204ENST00000493583 TNFRSF10AO00220 468 aa13.42□□□□□ -0.26
TFE3-204ENST00000493583 ADAM12O43184 909 aa13.42□□□□□ -0.26
TFE3-204ENST00000493583 IDH3BO43837 385 aa13.42□□□□□ -0.26
TFE3-204ENST00000493583 KRT8P05787 483 aa13.42□□□□□ -0.26
TFE3-204ENST00000493583 JUNBP17275 347 aaPredicted RBP13.42□□□□□ -0.26
TFE3-204ENST00000493583 LPOP22079 712 aaPredicted RBP13.42□□□□□ -0.26
TFE3-204ENST00000493583 GNPDA1P46926 289 aa13.42□□□□□ -0.26
TFE3-204ENST00000493583 DOC2BQ14184 412 aa13.42□□□□□ -0.26
TFE3-204ENST00000493583 TIGD6Q17RP2 521 aa13.42□□□□□ -0.26
TFE3-204ENST00000493583 SNAP47Q5SQN1 464 aa13.42□□□□□ -0.26
TFE3-204ENST00000493583 RSPO2Q6UXX9 243 aaPredicted RBP13.42□□□□□ -0.26
TFE3-204ENST00000493583 ABI3BPQ7Z7G0 1075 aa13.42□□□□□ -0.26
TFE3-204ENST00000493583 SERINC5Q86VE9 423 aa13.42□□□□□ -0.26
TFE3-204ENST00000493583 OR5AK3PQ8NH89 298 aa13.42□□□□□ -0.26
TFE3-204ENST00000493583 RAET1EQ8TD07 263 aa13.42□□□□□ -0.26
TFE3-204ENST00000493583 PYURFQ96I23 114 aa13.42□□□□□ -0.26
TFE3-204ENST00000493583 HSH2DQ96JZ2 352 aa13.42□□□□□ -0.26
TFE3-204ENST00000493583 ZNF300Q96RE9 604 aaPredicted RBP13.42□□□□□ -0.26
TFE3-204ENST00000493583 KAT8Q9H7Z6 458 aaKnown RBP13.42□□□□□ -0.26
TFE3-204ENST00000493583 C1orf109Q9NX04 203 aa13.42□□□□□ -0.26
TFE3-204ENST00000493583 KLHL3Q9UH77 587 aa13.42□□□□□ -0.26
TFE3-204ENST00000493583 GABARAPO95166 117 aa13.42□□□□□ -0.26
TFE3-204ENST00000493583 CLDN7O95471 211 aa13.42□□□□□ -0.26
TFE3-204ENST00000493583 PRAMEF1O95521 474 aa13.42□□□□□ -0.26
TFE3-204ENST00000493583 RAB25P57735 213 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms