RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 AP5B1Q2VPB7 878 aa9.75□□□□□ -0.85
PRPF3-206ENST00000493553 LETMD1Q6P1Q0 360 aa9.75□□□□□ -0.85
PRPF3-206ENST00000493553 UNC5DQ6UXZ4 953 aa9.75□□□□□ -0.85
PRPF3-206ENST00000493553 RPS27LQ71UM5 84 aaKnown RBP9.75□□□□□ -0.85
PRPF3-206ENST00000493553 TRMT11Q7Z4G4 463 aaKnown RBP9.75□□□□□ -0.85
PRPF3-206ENST00000493553 ZFAND4Q86XD8 727 aa9.75□□□□□ -0.85
PRPF3-206ENST00000493553 AQP12AQ8IXF9 295 aa9.75□□□□□ -0.85
PRPF3-206ENST00000493553 SLC22A15Q8IZD6 547 aa9.75□□□□□ -0.85
PRPF3-206ENST00000493553 SNX31Q8N9S9 440 aa9.75□□□□□ -0.85
PRPF3-206ENST00000493553 CSGALNACT1Q8TDX6 532 aa9.75□□□□□ -0.85
PRPF3-206ENST00000493553 SORCS1Q8WY21 1168 aa9.75□□□□□ -0.85
PRPF3-206ENST00000493553 SCAMP4Q969E2 229 aa9.75□□□□□ -0.85
PRPF3-206ENST00000493553 RSPRY1Q96DX4 576 aa9.75□□□□□ -0.85
PRPF3-206ENST00000493553 DUS3LQ96G46 650 aaKnown RBP9.75□□□□□ -0.85
PRPF3-206ENST00000493553 NAF1Q96HR8 494 aaKnown RBP9.75□□□□□ -0.85
PRPF3-206ENST00000493553 MARK4Q96L34 752 aa9.75□□□□□ -0.85
PRPF3-206ENST00000493553 ACOX2Q99424 681 aa9.75□□□□□ -0.85
PRPF3-206ENST00000493553 NPAS2Q99743 824 aa9.75□□□□□ -0.85
PRPF3-206ENST00000493553 GPATCH1Q9BRR8 931 aaKnown RBP9.75□□□□□ -0.85
PRPF3-206ENST00000493553 TRMT61BQ9BVS5 477 aaKnown RBP9.75□□□□□ -0.85
PRPF3-206ENST00000493553 DPEP2Q9H4A9 486 aa9.75□□□□□ -0.85
PRPF3-206ENST00000493553 C1orf109Q9NX04 203 aa9.75□□□□□ -0.85
PRPF3-206ENST00000493553 PCOLCE2Q9UKZ9 415 aa9.75□□□□□ -0.85
PRPF3-206ENST00000493553 BTRCQ9Y297 605 aa9.75□□□□□ -0.85
PRPF3-206ENST00000493553 YBX2Q9Y2T7 364 aaKnown RBP9.75□□□□□ -0.85
PRPF3-206ENST00000493553 TIMM22Q9Y584 194 aa9.75□□□□□ -0.85
PRPF3-206ENST00000493553 PCDHGA7Q9Y5G6 932 aa9.75□□□□□ -0.85
PRPF3-206ENST00000493553 CENPFP49454 3210 aa9.75□□□□□ -0.85
PRPF3-206ENST00000493553 NOTCH4Q99466 2003 aa9.74□□□□□ -0.85
PRPF3-206ENST00000493553 A0A0U1RQS6 177 aa9.74□□□□□ -0.85
PRPF3-206ENST00000493553 SLC5A10A0PJK1 596 aa9.74□□□□□ -0.85
PRPF3-206ENST00000493553 PRRT4C9JH25 899 aa9.74□□□□□ -0.85
PRPF3-206ENST00000493553 H0YJX3 145 aa9.74□□□□□ -0.85
PRPF3-206ENST00000493553 FBP2O00757 339 aa9.74□□□□□ -0.85
PRPF3-206ENST00000493553 CLGNO14967 610 aa9.74□□□□□ -0.85
PRPF3-206ENST00000493553 LSM1O15116 133 aaKnown RBP9.74□□□□□ -0.85
PRPF3-206ENST00000493553 TRIM24O15164 1050 aa9.74□□□□□ -0.85
PRPF3-206ENST00000493553 GPR39O43194 453 aa9.74□□□□□ -0.85
PRPF3-206ENST00000493553 RSL1D1O76021 490 aaKnown RBP9.74□□□□□ -0.85
PRPF3-206ENST00000493553 PDE5AO76074 875 aa9.74□□□□□ -0.85
PRPF3-206ENST00000493553 RECQL5O94762 991 aaPredicted RBP9.74□□□□□ -0.85
PRPF3-206ENST00000493553 MYO1DO94832 1006 aa9.74□□□□□ -0.85
PRPF3-206ENST00000493553 UMPSP11172 480 aa9.74□□□□□ -0.85
PRPF3-206ENST00000493553 SLC2A4P14672 509 aa9.74□□□□□ -0.85
PRPF3-206ENST00000493553 C5AR1P21730 350 aa9.74□□□□□ -0.85
PRPF3-206ENST00000493553 FCARP24071 287 aa9.74□□□□□ -0.85
PRPF3-206ENST00000493553 GJA4P35212 333 aa9.74□□□□□ -0.85
PRPF3-206ENST00000493553 HNRNPFP52597 415 aaKnown RBP9.74□□□□□ -0.85
PRPF3-206ENST00000493553 SESN3P58005 492 aa9.74□□□□□ -0.85
PRPF3-206ENST00000493553 LRRC74AQ0VAA2 488 aa9.74□□□□□ -0.85
PRPF3-206ENST00000493553 CSTF3Q12996 717 aaKnown RBP9.74□□□□□ -0.85
PRPF3-206ENST00000493553 ENPP2Q13822 863 aa9.74□□□□□ -0.85
PRPF3-206ENST00000493553 NFYCQ13952 458 aa9.74□□□□□ -0.85
PRPF3-206ENST00000493553 CEACAM7Q14002 265 aa9.74□□□□□ -0.85
PRPF3-206ENST00000493553 STARD3Q14849 445 aa9.74□□□□□ -0.85
PRPF3-206ENST00000493553 GAB4Q2WGN9 574 aa9.74□□□□□ -0.85
PRPF3-206ENST00000493553 CYP27C1Q4G0S4 372 aa9.74□□□□□ -0.85
PRPF3-206ENST00000493553 TCEAL5Q5H9L2 206 aa9.74□□□□□ -0.85
PRPF3-206ENST00000493553 MTX3Q5HYI7 312 aa9.74□□□□□ -0.85
PRPF3-206ENST00000493553 TCHHL1Q5QJ38 904 aaPredicted RBP9.74□□□□□ -0.85
PRPF3-206ENST00000493553 FRG2Q64ET8 278 aa9.74□□□□□ -0.85
PRPF3-206ENST00000493553 TRIM68Q6AZZ1 485 aa9.74□□□□□ -0.85
PRPF3-206ENST00000493553 TANGO2Q6ICL3 276 aa9.74□□□□□ -0.85
PRPF3-206ENST00000493553 C8orf82Q6P1X6 216 aaPredicted RBP9.74□□□□□ -0.85
PRPF3-206ENST00000493553 TMEM220Q6QAJ8 160 aa9.74□□□□□ -0.85
PRPF3-206ENST00000493553 CYP20A1Q6UW02 462 aa9.74□□□□□ -0.85
PRPF3-206ENST00000493553 VITQ6UXI7 678 aa9.74□□□□□ -0.85
PRPF3-206ENST00000493553 FKBP9P1Q75LS8 142 aa9.74□□□□□ -0.85
PRPF3-206ENST00000493553 DHFR2Q86XF0 187 aa9.74□□□□□ -0.85
PRPF3-206ENST00000493553 FUNDC1Q8IVP5 155 aa9.74□□□□□ -0.85
PRPF3-206ENST00000493553 PQLC1Q8N2U9 271 aa9.74□□□□□ -0.85
PRPF3-206ENST00000493553 ADCY4Q8NFM4 1077 aa9.74□□□□□ -0.85
PRPF3-206ENST00000493553 OR52B6Q8NGF0 335 aa9.74□□□□□ -0.85
PRPF3-206ENST00000493553 HM13Q8TCT9 377 aa9.74□□□□□ -0.85
PRPF3-206ENST00000493553 USP7Q93009 1102 aa9.74□□□□□ -0.85
PRPF3-206ENST00000493553 UBE2E3Q969T4 207 aa9.74□□□□□ -0.85
PRPF3-206ENST00000493553 LRRC58Q96CX6 371 aa9.74□□□□□ -0.85
PRPF3-206ENST00000493553 CMTM7Q96FZ5 175 aa9.74□□□□□ -0.85
PRPF3-206ENST00000493553 BTBD9Q96Q07 612 aa9.74□□□□□ -0.85
PRPF3-206ENST00000493553 FRG2BQ96QU4 278 aa9.74□□□□□ -0.85
PRPF3-206ENST00000493553 NR1H4Q96RI1 486 aaPredicted RBP9.74□□□□□ -0.85
PRPF3-206ENST00000493553 KCNA7Q96RP8 456 aa9.74□□□□□ -0.85
PRPF3-206ENST00000493553 TMEM79Q9BSE2 394 aa9.74□□□□□ -0.85
PRPF3-206ENST00000493553 KRTAP4-8Q9BYQ9 185 aa9.74□□□□□ -0.85
PRPF3-206ENST00000493553 KLHL4Q9C0H6 718 aa9.74□□□□□ -0.85
PRPF3-206ENST00000493553 NKX2-4Q9H2Z4 354 aa9.74□□□□□ -0.85
PRPF3-206ENST00000493553 LRTM1Q9HBL6 345 aa9.74□□□□□ -0.85
PRPF3-206ENST00000493553 FBRSL1Q9HCM7 1045 aaKnown RBP9.74□□□□□ -0.85
PRPF3-206ENST00000493553 HPS4Q9NQG7 708 aa9.74□□□□□ -0.85
PRPF3-206ENST00000493553 ABCD2Q9UBJ2 740 aa9.74□□□□□ -0.85
PRPF3-206ENST00000493553 ZNF225Q9UK10 706 aa9.74□□□□□ -0.85
PRPF3-206ENST00000493553 ADAMTS6Q9UKP5 1117 aa9.74□□□□□ -0.85
PRPF3-206ENST00000493553 TMPRSS11EQ9UL52 423 aa9.74□□□□□ -0.85
PRPF3-206ENST00000493553 ZNF490Q9ULM2 529 aaPredicted RBP9.74□□□□□ -0.85
PRPF3-206ENST00000493553 SCML1Q9UN30 329 aa9.74□□□□□ -0.85
PRPF3-206ENST00000493553 CYP8B1Q9UNU6 501 aa9.74□□□□□ -0.85
PRPF3-206ENST00000493553 KCNE2Q9Y6J6 123 aa9.74□□□□□ -0.85
PRPF3-206ENST00000493553 GBF1Q92538 1859 aa9.73□□□□□ -0.85
PRPF3-206ENST00000493553 LOC730098B7Z3J9 87 aa9.73□□□□□ -0.85
PRPF3-206ENST00000493553 E7ENX8 843 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms