RNA–Protein interactions for RNA: ENST00000492545.1

CTDSP1-211, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 634 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-211ENST00000492545 PEX12O00623 359 aa22.66■■□□□ 1.22
CTDSP1-211ENST00000492545 NDC80O14777 642 aa22.66■■□□□ 1.22
CTDSP1-211ENST00000492545 KLHL41O60662 606 aa22.66■■□□□ 1.22
CTDSP1-211ENST00000492545 SLC16A8O95907 504 aa22.66■■□□□ 1.22
CTDSP1-211ENST00000492545 ERVK-10P10266 1014 aa22.66■■□□□ 1.22
CTDSP1-211ENST00000492545 PSMB5P28074 263 aa22.66■■□□□ 1.22
CTDSP1-211ENST00000492545 EMP3P54852 163 aa22.66■■□□□ 1.22
CTDSP1-211ENST00000492545 ABATP80404 500 aa22.66■■□□□ 1.22
CTDSP1-211ENST00000492545 MPP1Q00013 466 aa22.66■■□□□ 1.22
CTDSP1-211ENST00000492545 BBS9Q3SYG4 887 aa22.66■■□□□ 1.22
CTDSP1-211ENST00000492545 WASHC2DQ5SRD0 308 aa22.66■■□□□ 1.22
CTDSP1-211ENST00000492545 FAM69BQ5VUD6 431 aa22.66■■□□□ 1.22
CTDSP1-211ENST00000492545 RNF44Q7L0R7 432 aa22.66■■□□□ 1.22
CTDSP1-211ENST00000492545 KLHL7Q8IXQ5 586 aa22.66■■□□□ 1.22
CTDSP1-211ENST00000492545 ZFYVE21Q9BQ24 234 aa22.66■■□□□ 1.22
CTDSP1-211ENST00000492545 DPH7Q9BTV6 452 aa22.66■■□□□ 1.22
CTDSP1-211ENST00000492545 TRIM4Q9C037 500 aa22.66■■□□□ 1.22
CTDSP1-211ENST00000492545 SLC26A1Q9H2B4 701 aa22.66■■□□□ 1.22
CTDSP1-211ENST00000492545 MRPS30Q9NP92 439 aaKnown RBP22.66■■□□□ 1.22
CTDSP1-211ENST00000492545 TRMT6Q9UJA5 497 aaKnown RBP22.66■■□□□ 1.22
CTDSP1-211ENST00000492545 ZNF451Q9Y4E5 1061 aa22.66■■□□□ 1.22
CTDSP1-211ENST00000492545 HYKKA2RU49 373 aa22.65■■□□□ 1.22
CTDSP1-211ENST00000492545 KRT87PA6NCN2 255 aa22.65■■□□□ 1.22
CTDSP1-211ENST00000492545 OTX2P32243 289 aa22.65■■□□□ 1.22
CTDSP1-211ENST00000492545 RGS4P49798 205 aa22.65■■□□□ 1.22
CTDSP1-211ENST00000492545 VSX2P58304 361 aaPredicted RBP22.65■■□□□ 1.22
CTDSP1-211ENST00000492545 CHAF1BQ13112 559 aa22.65■■□□□ 1.22
CTDSP1-211ENST00000492545 CUL1Q13616 776 aa22.65■■□□□ 1.22
CTDSP1-211ENST00000492545 MSS51Q4VC12 460 aa22.65■■□□□ 1.22
CTDSP1-211ENST00000492545 PRMT9Q6P2P2 845 aa22.65■■□□□ 1.22
CTDSP1-211ENST00000492545 FBXO42Q6P3S6 717 aa22.65■■□□□ 1.22
CTDSP1-211ENST00000492545 MRGPREQ86SM8 312 aa22.65■■□□□ 1.22
CTDSP1-211ENST00000492545 ZNF480Q8WV37 535 aa22.65■■□□□ 1.22
CTDSP1-211ENST00000492545 PLCD4Q9BRC7 762 aa22.65■■□□□ 1.22
CTDSP1-211ENST00000492545 ACAT2Q9BWD1 397 aa22.65■■□□□ 1.22
CTDSP1-211ENST00000492545 SLC22A11Q9NSA0 550 aa22.65■■□□□ 1.22
CTDSP1-211ENST00000492545 NXT1Q9UKK6 140 aaKnown RBP22.65■■□□□ 1.22
CTDSP1-211ENST00000492545 A0A0J9YVX5 310 aa22.64■■□□□ 1.21
CTDSP1-211ENST00000492545 E7ENX8 843 aa22.64■■□□□ 1.21
CTDSP1-211ENST00000492545 NR1D1P20393 614 aa22.64■■□□□ 1.21
CTDSP1-211ENST00000492545 TAP2Q03519 686 aa22.64■■□□□ 1.21
CTDSP1-211ENST00000492545 ATP1A4Q13733 1029 aa22.64■■□□□ 1.21
CTDSP1-211ENST00000492545 FRG1Q14331 258 aaKnown RBP22.64■■□□□ 1.21
CTDSP1-211ENST00000492545 ICE2Q659A1 982 aa22.64■■□□□ 1.21
CTDSP1-211ENST00000492545 HIBCHQ6NVY1 386 aaPredicted RBP22.64■■□□□ 1.21
CTDSP1-211ENST00000492545 SUSD1Q6UWL2 747 aa22.64■■□□□ 1.21
CTDSP1-211ENST00000492545 CPNE9Q8IYJ1 553 aa22.64■■□□□ 1.21
CTDSP1-211ENST00000492545 CERS2Q96G23 380 aa22.64■■□□□ 1.21
CTDSP1-211ENST00000492545 ZC3H7BQ9UGR2 993 aaKnown RBP22.64■■□□□ 1.21
CTDSP1-211ENST00000492545 CORO1CQ9ULV4 474 aaPredicted RBP22.64■■□□□ 1.21
CTDSP1-211ENST00000492545 MED13Q9UHV7 2174 aa22.63■■□□□ 1.21
CTDSP1-211ENST00000492545 NBASA2RRP1 2371 aa22.63■■□□□ 1.21
CTDSP1-211ENST00000492545 SYF2O95926 243 aaKnown RBP22.63■■□□□ 1.21
CTDSP1-211ENST00000492545 C8GP07360 202 aa22.63■■□□□ 1.21
CTDSP1-211ENST00000492545 HRH2P25021 359 aa22.63■■□□□ 1.21
CTDSP1-211ENST00000492545 ARL4CP56559 192 aa22.63■■□□□ 1.21
CTDSP1-211ENST00000492545 HIF1AQ16665 826 aa22.63■■□□□ 1.21
CTDSP1-211ENST00000492545 MUM1Q2TAK8 710 aa22.63■■□□□ 1.21
CTDSP1-211ENST00000492545 UBE2R2Q712K3 238 aaPredicted RBP22.63■■□□□ 1.21
CTDSP1-211ENST00000492545 PALM2Q8IXS6 379 aa22.63■■□□□ 1.21
CTDSP1-211ENST00000492545 CLEC1AQ8NC01 280 aa22.63■■□□□ 1.21
CTDSP1-211ENST00000492545 MCOLN3Q8TDD5 553 aa22.63■■□□□ 1.21
CTDSP1-211ENST00000492545 PCBD2Q9H0N5 130 aa22.63■■□□□ 1.21
CTDSP1-211ENST00000492545 SLC6A20Q9NP91 592 aa22.63■■□□□ 1.21
CTDSP1-211ENST00000492545 ASH1LQ9NR48 2969 aaKnown RBP22.62■■□□□ 1.21
CTDSP1-211ENST00000492545 UBR5O95071 2799 aaPredicted RBP22.62■■□□□ 1.21
CTDSP1-211ENST00000492545 PYCARD-AS1I3L0S3 204 aa22.62■■□□□ 1.21
CTDSP1-211ENST00000492545 TXNDC9O14530 226 aa22.62■■□□□ 1.21
CTDSP1-211ENST00000492545 SLC16A5O15375 505 aa22.62■■□□□ 1.21
CTDSP1-211ENST00000492545 AHSGP02765 367 aa22.62■■□□□ 1.21
CTDSP1-211ENST00000492545 PDGFAP04085 211 aa22.62■■□□□ 1.21
CTDSP1-211ENST00000492545 F7P08709 466 aaPredicted RBP22.62■■□□□ 1.21
CTDSP1-211ENST00000492545 EZRP15311 586 aaKnown RBP22.62■■□□□ 1.21
CTDSP1-211ENST00000492545 ITGAXP20702 1163 aa22.62■■□□□ 1.21
CTDSP1-211ENST00000492545 MCM3P25205 808 aa22.62■■□□□ 1.21
CTDSP1-211ENST00000492545 ELK3P41970 407 aa22.62■■□□□ 1.21
CTDSP1-211ENST00000492545 CARSP49589 748 aaKnown RBP22.62■■□□□ 1.21
CTDSP1-211ENST00000492545 FOXK1P85037 733 aa22.62■■□□□ 1.21
CTDSP1-211ENST00000492545 SP140Q13342 867 aa22.62■■□□□ 1.21
CTDSP1-211ENST00000492545 SLC9A5Q14940 896 aa22.62■■□□□ 1.21
CTDSP1-211ENST00000492545 DCAF10Q5QP82 559 aa22.62■■□□□ 1.21
CTDSP1-211ENST00000492545 FRMPD2BQ6IN97 320 aa22.62■■□□□ 1.21
CTDSP1-211ENST00000492545 ZNF425Q6IV72 752 aa22.62■■□□□ 1.21
CTDSP1-211ENST00000492545 PAQR7Q86WK9 346 aa22.62■■□□□ 1.21
CTDSP1-211ENST00000492545 IGDCC3Q8IVU1 814 aa22.62■■□□□ 1.21
CTDSP1-211ENST00000492545 FDCSPQ8NFU4 85 aa22.62■■□□□ 1.21
CTDSP1-211ENST00000492545 SNF8Q96H20 258 aa22.62■■□□□ 1.21
CTDSP1-211ENST00000492545 VPS50Q96JG6 964 aa22.62■■□□□ 1.21
CTDSP1-211ENST00000492545 CCDC138Q96M89 665 aa22.62■■□□□ 1.21
CTDSP1-211ENST00000492545 PPANQ9NQ55 473 aaKnown RBP22.62■■□□□ 1.21
CTDSP1-211ENST00000492545 P4HTMQ9NXG6 502 aa22.62■■□□□ 1.21
CTDSP1-211ENST00000492545 GPR83Q9NYM4 423 aa22.62■■□□□ 1.21
CTDSP1-211ENST00000492545 TAC3Q9UHF0 121 aa22.62■■□□□ 1.21
CTDSP1-211ENST00000492545 PYCARDQ9ULZ3 195 aa22.62■■□□□ 1.21
CTDSP1-211ENST00000492545 CDC14AQ9UNH5 594 aa22.62■■□□□ 1.21
CTDSP1-211ENST00000492545 TEX264Q9Y6I9 313 aa22.62■■□□□ 1.21
CTDSP1-211ENST00000492545 FER1L5A0AVI2 2057 aa22.62■■□□□ 1.21
CTDSP1-211ENST00000492545 LOC105369274A0A096LPK9 316 aa22.61■■□□□ 1.21
CTDSP1-211ENST00000492545 LOC102723532A0A0G2JNH3 316 aa22.61■■□□□ 1.21
CTDSP1-211ENST00000492545 CNOT3O75175 753 aaKnown RBP22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms