RNA–Protein interactions for RNA: ENST00000492099.1

SH3GL3-204, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 1 (best)

Gene SH3GL3, Length 1,170 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-204ENST00000492099 ONECUT2O95948 504 aa25.96■■□□□ 1.75
SH3GL3-204ENST00000492099 NR1D1P20393 614 aa25.96■■□□□ 1.75
SH3GL3-204ENST00000492099 VSX2P58304 361 aaPredicted RBP25.96■■□□□ 1.75
SH3GL3-204ENST00000492099 KCNC4Q03721 635 aa25.96■■□□□ 1.75
SH3GL3-204ENST00000492099 TLE1Q04724 770 aa25.96■■□□□ 1.75
SH3GL3-204ENST00000492099 TSTA3Q13630 321 aaPredicted RBP25.96■■□□□ 1.75
SH3GL3-204ENST00000492099 WASHC2DQ5SRD0 308 aa25.96■■□□□ 1.75
SH3GL3-204ENST00000492099 RNF44Q7L0R7 432 aa25.96■■□□□ 1.75
SH3GL3-204ENST00000492099 GALNT7Q86SF2 657 aa25.96■■□□□ 1.75
SH3GL3-204ENST00000492099 FKBP10Q96AY3 582 aa25.96■■□□□ 1.75
SH3GL3-204ENST00000492099 PTERQ96BW5 349 aa25.96■■□□□ 1.75
SH3GL3-204ENST00000492099 ZFYVE21Q9BQ24 234 aa25.96■■□□□ 1.75
SH3GL3-204ENST00000492099 UTP6Q9NYH9 597 aaKnown RBP25.96■■□□□ 1.75
SH3GL3-204ENST00000492099 ZC3H7BQ9UGR2 993 aaKnown RBP25.96■■□□□ 1.75
SH3GL3-204ENST00000492099 A0A0J9YVX5 310 aa25.95■■□□□ 1.74
SH3GL3-204ENST00000492099 TTI1O43156 1089 aa25.95■■□□□ 1.74
SH3GL3-204ENST00000492099 ALBP02768 609 aa25.95■■□□□ 1.74
SH3GL3-204ENST00000492099 ATXN8OSP0DMR3 200 aa25.95■■□□□ 1.74
SH3GL3-204ENST00000492099 MCM3P25205 808 aa25.95■■□□□ 1.74
SH3GL3-204ENST00000492099 OTX2P32243 289 aa25.95■■□□□ 1.74
SH3GL3-204ENST00000492099 ELK3P41970 407 aa25.95■■□□□ 1.74
SH3GL3-204ENST00000492099 CARSP49589 748 aaKnown RBP25.95■■□□□ 1.74
SH3GL3-204ENST00000492099 RGS4P49798 205 aa25.95■■□□□ 1.74
SH3GL3-204ENST00000492099 ITGA8P53708 1063 aa25.95■■□□□ 1.74
SH3GL3-204ENST00000492099 ARL4CP56559 192 aa25.95■■□□□ 1.74
SH3GL3-204ENST00000492099 PRDX1Q06830 199 aaKnown RBP25.95■■□□□ 1.74
SH3GL3-204ENST00000492099 SLC9A5Q14940 896 aa25.95■■□□□ 1.74
SH3GL3-204ENST00000492099 HIF1AQ16665 826 aa25.95■■□□□ 1.74
SH3GL3-204ENST00000492099 UBE2R2Q712K3 238 aaPredicted RBP25.95■■□□□ 1.74
SH3GL3-204ENST00000492099 ZNF480Q8WV37 535 aa25.95■■□□□ 1.74
SH3GL3-204ENST00000492099 SNF8Q96H20 258 aa25.95■■□□□ 1.74
SH3GL3-204ENST00000492099 NDNQ99608 321 aa25.95■■□□□ 1.74
SH3GL3-204ENST00000492099 PLCD4Q9BRC7 762 aa25.95■■□□□ 1.74
SH3GL3-204ENST00000492099 TRIM51Q9BSJ1 452 aa25.95■■□□□ 1.74
SH3GL3-204ENST00000492099 EPN3Q9H201 632 aa25.95■■□□□ 1.74
SH3GL3-204ENST00000492099 MLXIPLQ9NP71 852 aa25.95■■□□□ 1.74
SH3GL3-204ENST00000492099 PPANQ9NQ55 473 aaKnown RBP25.95■■□□□ 1.74
SH3GL3-204ENST00000492099 SLC22A11Q9NSA0 550 aa25.95■■□□□ 1.74
SH3GL3-204ENST00000492099 G3BP2Q9UN86 482 aaKnown RBP25.95■■□□□ 1.74
SH3GL3-204ENST00000492099 E7ENX8 843 aa25.94■■□□□ 1.74
SH3GL3-204ENST00000492099 CEACAM4O75871 244 aa25.94■■□□□ 1.74
SH3GL3-204ENST00000492099 SEC31AO94979 1220 aaKnown RBP25.94■■□□□ 1.74
SH3GL3-204ENST00000492099 IGHEP01854 428 aa25.94■■□□□ 1.74
SH3GL3-204ENST00000492099 AHSGP02765 367 aa25.94■■□□□ 1.74
SH3GL3-204ENST00000492099 GABRB3P28472 473 aa25.94■■□□□ 1.74
SH3GL3-204ENST00000492099 PGDP52209 483 aa25.94■■□□□ 1.74
SH3GL3-204ENST00000492099 TAP2Q03519 686 aa25.94■■□□□ 1.74
SH3GL3-204ENST00000492099 ATP1A4Q13733 1029 aa25.94■■□□□ 1.74
SH3GL3-204ENST00000492099 FRMPD2BQ6IN97 320 aa25.94■■□□□ 1.74
SH3GL3-204ENST00000492099 FBXO42Q6P3S6 717 aa25.94■■□□□ 1.74
SH3GL3-204ENST00000492099 OVCH1Q7RTY7 1134 aa25.94■■□□□ 1.74
SH3GL3-204ENST00000492099 PIWIL4Q7Z3Z4 852 aaKnown RBP25.94■■□□□ 1.74
SH3GL3-204ENST00000492099 CLMPQ9H6B4 373 aa25.94■■□□□ 1.74
SH3GL3-204ENST00000492099 SLC6A20Q9NP91 592 aa25.94■■□□□ 1.74
SH3GL3-204ENST00000492099 TAC3Q9UHF0 121 aa25.94■■□□□ 1.74
SH3GL3-204ENST00000492099 CHMP2BQ9UQN3 213 aa25.94■■□□□ 1.74
SH3GL3-204ENST00000492099 FER1L5A0AVI2 2057 aa25.94■■□□□ 1.74
SH3GL3-204ENST00000492099 HYKKA2RU49 373 aa25.93■■□□□ 1.74
SH3GL3-204ENST00000492099 NDC80O14777 642 aa25.93■■□□□ 1.74
SH3GL3-204ENST00000492099 YBX1P67809 324 aaKnown RBP25.93■■□□□ 1.74
SH3GL3-204ENST00000492099 ABATP80404 500 aa25.93■■□□□ 1.74
SH3GL3-204ENST00000492099 HP1BP3Q5SSJ5 553 aaPredicted RBP25.93■■□□□ 1.74
SH3GL3-204ENST00000492099 TEDDM1Q5T9Z0 273 aa25.93■■□□□ 1.74
SH3GL3-204ENST00000492099 ICE2Q659A1 982 aa25.93■■□□□ 1.74
SH3GL3-204ENST00000492099 MRGPREQ86SM8 312 aa25.93■■□□□ 1.74
SH3GL3-204ENST00000492099 PPFIBP2Q8ND30 876 aa25.93■■□□□ 1.74
SH3GL3-204ENST00000492099 MCOLN3Q8TDD5 553 aa25.93■■□□□ 1.74
SH3GL3-204ENST00000492099 NACC2Q96BF6 587 aa25.93■■□□□ 1.74
SH3GL3-204ENST00000492099 CFAP36Q96G28 342 aa25.93■■□□□ 1.74
SH3GL3-204ENST00000492099 FER1L6-AS2Q96M78 137 aa25.93■■□□□ 1.74
SH3GL3-204ENST00000492099 PWWP2AQ96N64 755 aa25.93■■□□□ 1.74
SH3GL3-204ENST00000492099 PCDHGB7Q9Y5F8 929 aa25.93■■□□□ 1.74
SH3GL3-204ENST00000492099 TEX264Q9Y6I9 313 aa25.93■■□□□ 1.74
SH3GL3-204ENST00000492099 LOC105369274A0A096LPK9 316 aa25.92■■□□□ 1.74
SH3GL3-204ENST00000492099 LOC102723532A0A0G2JNH3 316 aa25.92■■□□□ 1.74
SH3GL3-204ENST00000492099 EFCAB8A8MWE9 144 aa25.92■■□□□ 1.74
SH3GL3-204ENST00000492099 PEX12O00623 359 aa25.92■■□□□ 1.74
SH3GL3-204ENST00000492099 CNOT3O75175 753 aaKnown RBP25.92■■□□□ 1.74
SH3GL3-204ENST00000492099 PDGFAP04085 211 aa25.92■■□□□ 1.74
SH3GL3-204ENST00000492099 C8GP07360 202 aa25.92■■□□□ 1.74
SH3GL3-204ENST00000492099 ITGAXP20702 1163 aa25.92■■□□□ 1.74
SH3GL3-204ENST00000492099 TIAL1Q01085 375 aaKnown RBP eCLIP25.92■■□□□ 1.74
SH3GL3-204ENST00000492099 SPNS2Q8IVW8 549 aa25.92■■□□□ 1.74
SH3GL3-204ENST00000492099 PALM2Q8IXS6 379 aa25.92■■□□□ 1.74
SH3GL3-204ENST00000492099 OR4N4Q8N0Y3 316 aa25.92■■□□□ 1.74
SH3GL3-204ENST00000492099 EEF1AKMT1Q8WVE0 214 aa25.92■■□□□ 1.74
SH3GL3-204ENST00000492099 KRT12Q99456 494 aa25.92■■□□□ 1.74
SH3GL3-204ENST00000492099 TRIM31Q9BZY9 425 aa25.92■■□□□ 1.74
SH3GL3-204ENST00000492099 SLC26A1Q9H2B4 701 aa25.92■■□□□ 1.74
SH3GL3-204ENST00000492099 WDR54Q9H977 334 aa25.92■■□□□ 1.74
SH3GL3-204ENST00000492099 PLAC1Q9HBJ0 212 aa25.92■■□□□ 1.74
SH3GL3-204ENST00000492099 CORO1CQ9ULV4 474 aaPredicted RBP25.92■■□□□ 1.74
SH3GL3-204ENST00000492099 IGKV1-8A0A0C4DH67 115 aa25.91■■□□□ 1.74
SH3GL3-204ENST00000492099 FANCGO15287 622 aa25.91■■□□□ 1.74
SH3GL3-204ENST00000492099 NRP2O60462 931 aa25.91■■□□□ 1.74
SH3GL3-204ENST00000492099 EIF2S1P05198 315 aaKnown RBP25.91■■□□□ 1.74
SH3GL3-204ENST00000492099 RELAQ04206 551 aa25.91■■□□□ 1.74
SH3GL3-204ENST00000492099 FRG1Q14331 258 aaKnown RBP25.91■■□□□ 1.74
SH3GL3-204ENST00000492099 RBM20Q5T481 1227 aaKnown RBP25.91■■□□□ 1.74
SH3GL3-204ENST00000492099 STEAP4Q687X5 459 aa25.91■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms