RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 GALNT16Q8N428 558 aa15.87■□□□□ 0.13
PDLIM2-217ENST00000491330 ZADH2Q8N4Q0 377 aa15.87■□□□□ 0.13
PDLIM2-217ENST00000491330 FDCSPQ8NFU4 85 aa15.87■□□□□ 0.13
PDLIM2-217ENST00000491330 LRRC39Q96DD0 335 aa15.87■□□□□ 0.13
PDLIM2-217ENST00000491330 CABS1Q96KC9 395 aa15.87■□□□□ 0.13
PDLIM2-217ENST00000491330 DPH7Q9BTV6 452 aa15.87■□□□□ 0.13
PDLIM2-217ENST00000491330 MENTQ9BUN1 341 aa15.87■□□□□ 0.13
PDLIM2-217ENST00000491330 ACAT2Q9BWD1 397 aa15.87■□□□□ 0.13
PDLIM2-217ENST00000491330 TRIM54Q9BYV2 358 aa15.87■□□□□ 0.13
PDLIM2-217ENST00000491330 MLXIPLQ9NP71 852 aa15.87■□□□□ 0.13
PDLIM2-217ENST00000491330 PPANQ9NQ55 473 aaKnown RBP15.87■□□□□ 0.13
PDLIM2-217ENST00000491330 FBXO6Q9NRD1 293 aaPredicted RBP15.87■□□□□ 0.13
PDLIM2-217ENST00000491330 SEMA3GQ9NS98 782 aa15.87■□□□□ 0.13
PDLIM2-217ENST00000491330 TAS2R13Q9NYV9 303 aa15.87■□□□□ 0.13
PDLIM2-217ENST00000491330 FBXO5Q9UKT4 447 aa15.87■□□□□ 0.13
PDLIM2-217ENST00000491330 PYCARDQ9ULZ3 195 aa15.87■□□□□ 0.13
PDLIM2-217ENST00000491330 DHRS7Q9Y394 339 aa15.87■□□□□ 0.13
PDLIM2-217ENST00000491330 KLK4Q9Y5K2 254 aa15.87■□□□□ 0.13
PDLIM2-217ENST00000491330 AGPSO00116 658 aa15.86■□□□□ 0.13
PDLIM2-217ENST00000491330 MYO1CO00159 1063 aa15.86■□□□□ 0.13
PDLIM2-217ENST00000491330 MMP11P24347 488 aa15.86■□□□□ 0.13
PDLIM2-217ENST00000491330 CXCR2P25025 360 aa15.86■□□□□ 0.13
PDLIM2-217ENST00000491330 EMP3P54852 163 aa15.86■□□□□ 0.13
PDLIM2-217ENST00000491330 ILF2Q12905 390 aaKnown RBP15.86■□□□□ 0.13
PDLIM2-217ENST00000491330 SPANXN3Q5MJ09 141 aa15.86■□□□□ 0.13
PDLIM2-217ENST00000491330 MRPL14Q6P1L8 145 aaKnown RBP15.86■□□□□ 0.13
PDLIM2-217ENST00000491330 MYO1HQ8N1T3 1032 aa15.86■□□□□ 0.13
PDLIM2-217ENST00000491330 FBXO15Q8NCQ5 510 aaPredicted RBP15.86■□□□□ 0.13
PDLIM2-217ENST00000491330 BBOF1Q8ND07 529 aa15.86■□□□□ 0.13
PDLIM2-217ENST00000491330 OR2A1Q8NGT9 310 aa15.86■□□□□ 0.13
PDLIM2-217ENST00000491330 CPT1CQ8TCG5 803 aa15.86■□□□□ 0.13
PDLIM2-217ENST00000491330 YIPF2Q9BWQ6 316 aa15.86■□□□□ 0.13
PDLIM2-217ENST00000491330 PCBD2Q9H0N5 130 aa15.86■□□□□ 0.13
PDLIM2-217ENST00000491330 DDX47Q9H0S4 455 aaKnown RBP15.86■□□□□ 0.13
PDLIM2-217ENST00000491330 ZNF282Q9UDV7 671 aaPredicted RBP15.86■□□□□ 0.13
PDLIM2-217ENST00000491330 RUVBL2Q9Y230 463 aaKnown RBP15.86■□□□□ 0.13
PDLIM2-217ENST00000491330 FITM1A5D6W6 292 aa15.85■□□□□ 0.13
PDLIM2-217ENST00000491330 H3BMH7 237 aa15.85■□□□□ 0.13
PDLIM2-217ENST00000491330 PRICKLE3O43900 615 aaPredicted RBP15.85■□□□□ 0.13
PDLIM2-217ENST00000491330 UQCRHP07919 91 aa15.85■□□□□ 0.13
PDLIM2-217ENST00000491330 CCND1P24385 295 aa15.85■□□□□ 0.13
PDLIM2-217ENST00000491330 ITGA3P26006 1051 aa15.85■□□□□ 0.13
PDLIM2-217ENST00000491330 GRK3P35626 688 aa15.85■□□□□ 0.13
PDLIM2-217ENST00000491330 SLC1A2P43004 574 aa15.85■□□□□ 0.13
PDLIM2-217ENST00000491330 CLCN7P51798 805 aa15.85■□□□□ 0.13
PDLIM2-217ENST00000491330 MLLT10P55197 1068 aa15.85■□□□□ 0.13
PDLIM2-217ENST00000491330 DR1Q01658 176 aa15.85■□□□□ 0.13
PDLIM2-217ENST00000491330 PRDX1Q06830 199 aaKnown RBP15.85■□□□□ 0.13
PDLIM2-217ENST00000491330 GBX1Q14549 363 aa15.85■□□□□ 0.13
PDLIM2-217ENST00000491330 MYBPC3Q14896 1274 aa15.85■□□□□ 0.13
PDLIM2-217ENST00000491330 IGFBP7Q16270 282 aa15.85■□□□□ 0.13
PDLIM2-217ENST00000491330 HSP90AA5PQ58FG0 334 aa15.85■□□□□ 0.13
PDLIM2-217ENST00000491330 GARNL3Q5VVW2 1013 aa15.85■□□□□ 0.13
PDLIM2-217ENST00000491330 KIAA0408Q6ZU52 694 aa15.85■□□□□ 0.13
PDLIM2-217ENST00000491330 UBE2R2Q712K3 238 aaPredicted RBP15.85■□□□□ 0.13
PDLIM2-217ENST00000491330 DENND6AQ8IWF6 608 aa15.85■□□□□ 0.13
PDLIM2-217ENST00000491330 IQCKQ8N0W5 287 aa15.85■□□□□ 0.13
PDLIM2-217ENST00000491330 TBC1D19Q8N5T2 526 aa15.85■□□□□ 0.13
PDLIM2-217ENST00000491330 MIEF2Q96C03 454 aa15.85■□□□□ 0.13
PDLIM2-217ENST00000491330 MVB12AQ96EY5 273 aa15.85■□□□□ 0.13
PDLIM2-217ENST00000491330 SMAD5Q99717 465 aaKnown RBP15.85■□□□□ 0.13
PDLIM2-217ENST00000491330 SLC26A1Q9H2B4 701 aa15.85■□□□□ 0.13
PDLIM2-217ENST00000491330 IARS2Q9NSE4 1012 aaKnown RBP15.85■□□□□ 0.13
PDLIM2-217ENST00000491330 ABCF3Q9NUQ8 709 aa15.85■□□□□ 0.13
PDLIM2-217ENST00000491330 ZCWPW2A0A1B0GU75 182 aa15.84■□□□□ 0.13
PDLIM2-217ENST00000491330 ARHGEF33A8MVX0 844 aa15.84■□□□□ 0.13
PDLIM2-217ENST00000491330 PCDH17O14917 1159 aa15.84■□□□□ 0.13
PDLIM2-217ENST00000491330 HCRTR1O43613 425 aa15.84■□□□□ 0.13
PDLIM2-217ENST00000491330 ONECUT2O95948 504 aa15.84■□□□□ 0.13
PDLIM2-217ENST00000491330 C8GP07360 202 aa15.84■□□□□ 0.13
PDLIM2-217ENST00000491330 EZRP15311 586 aaKnown RBP15.84■□□□□ 0.13
PDLIM2-217ENST00000491330 ETF1P62495 437 aaKnown RBP15.84■□□□□ 0.13
PDLIM2-217ENST00000491330 AP2B1P63010 937 aa15.84■□□□□ 0.13
PDLIM2-217ENST00000491330 RELAQ04206 551 aa15.84■□□□□ 0.13
PDLIM2-217ENST00000491330 UBAP2LQ14157 1087 aaKnown RBP15.84■□□□□ 0.13
PDLIM2-217ENST00000491330 CCSMST1Q4G0I0 132 aa15.84■□□□□ 0.13
PDLIM2-217ENST00000491330 ICE2Q659A1 982 aa15.84■□□□□ 0.13
PDLIM2-217ENST00000491330 SUSD1Q6UWL2 747 aa15.84■□□□□ 0.13
PDLIM2-217ENST00000491330 MAATS1Q7Z4T9 603 aa15.84■□□□□ 0.13
PDLIM2-217ENST00000491330 FAM26EQ8N5C1 309 aa15.84■□□□□ 0.13
PDLIM2-217ENST00000491330 GALNT11Q8NCW6 608 aa15.84■□□□□ 0.13
PDLIM2-217ENST00000491330 ASB11Q8WXH4 323 aa15.84■□□□□ 0.13
PDLIM2-217ENST00000491330 PNPLA2Q96AD5 504 aa15.84■□□□□ 0.13
PDLIM2-217ENST00000491330 SIGLEC10Q96LC7 697 aa15.84■□□□□ 0.13
PDLIM2-217ENST00000491330 CCDC138Q96M89 665 aa15.84■□□□□ 0.13
PDLIM2-217ENST00000491330 PKP4Q99569 1192 aa15.84■□□□□ 0.13
PDLIM2-217ENST00000491330 GPR21Q99679 349 aa15.84■□□□□ 0.13
PDLIM2-217ENST00000491330 PLCD4Q9BRC7 762 aa15.84■□□□□ 0.13
PDLIM2-217ENST00000491330 CRB3Q9BUF7 120 aa15.84■□□□□ 0.13
PDLIM2-217ENST00000491330 ILKAPQ9H0C8 392 aaPredicted RBP15.84■□□□□ 0.13
PDLIM2-217ENST00000491330 CCDC177Q9NQR7 707 aaPredicted RBP15.84■□□□□ 0.13
PDLIM2-217ENST00000491330 ENAMQ9NRM1 1142 aa15.84■□□□□ 0.13
PDLIM2-217ENST00000491330 TAC3Q9UHF0 121 aa15.84■□□□□ 0.13
PDLIM2-217ENST00000491330 CFAP46Q8IYW2 2715 aa15.84■□□□□ 0.13
PDLIM2-217ENST00000491330 SMG1Q96Q15 3661 aaKnown RBP15.83■□□□□ 0.13
PDLIM2-217ENST00000491330 OR2A25A4D2G3 310 aa15.83■□□□□ 0.12
PDLIM2-217ENST00000491330 K7EM74 188 aa15.83■□□□□ 0.12
PDLIM2-217ENST00000491330 TUBB4AP04350 444 aa15.83■□□□□ 0.12
PDLIM2-217ENST00000491330 FBLP22087 321 aaKnown RBP15.83■□□□□ 0.12
PDLIM2-217ENST00000491330 PSMB5P28074 263 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms