RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 SLC16A8O95907 504 aa17.21■□□□□ 0.35
HMGN1-219ENST00000491183 ALBP02768 609 aa17.21■□□□□ 0.35
HMGN1-219ENST00000491183 MPC1LP0DKB6 136 aa17.21■□□□□ 0.35
HMGN1-219ENST00000491183 PIM1P11309 404 aaPredicted RBP17.21■□□□□ 0.35
HMGN1-219ENST00000491183 IVDP26440 423 aa17.21■□□□□ 0.35
HMGN1-219ENST00000491183 PNLIPRP1P54315 467 aa17.21■□□□□ 0.35
HMGN1-219ENST00000491183 ARHGAP19Q14CB8 494 aa17.21■□□□□ 0.35
HMGN1-219ENST00000491183 PPP1R7Q15435 360 aa17.21■□□□□ 0.35
HMGN1-219ENST00000491183 NKG7Q16617 165 aa17.21■□□□□ 0.35
HMGN1-219ENST00000491183 FAM214AQ32MH5 1076 aa17.21■□□□□ 0.35
HMGN1-219ENST00000491183 MSS51Q4VC12 460 aa17.21■□□□□ 0.35
HMGN1-219ENST00000491183 METTL27Q8N6F8 245 aaPredicted RBP17.21■□□□□ 0.35
HMGN1-219ENST00000491183 RBMXL3Q8N7X1 1067 aaKnown RBP17.21■□□□□ 0.35
HMGN1-219ENST00000491183 TTC29Q8NA56 475 aaPredicted RBP17.21■□□□□ 0.35
HMGN1-219ENST00000491183 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.21■□□□□ 0.35
HMGN1-219ENST00000491183 FBXO15Q8NCQ5 510 aaPredicted RBP17.21■□□□□ 0.35
HMGN1-219ENST00000491183 PPFIBP2Q8ND30 876 aa17.21■□□□□ 0.35
HMGN1-219ENST00000491183 CD200R1Q8TD46 325 aa17.21■□□□□ 0.35
HMGN1-219ENST00000491183 CALML6Q8TD86 181 aa17.21■□□□□ 0.35
HMGN1-219ENST00000491183 ZNF480Q8WV37 535 aa17.21■□□□□ 0.35
HMGN1-219ENST00000491183 INPP5DQ92835 1189 aa17.21■□□□□ 0.35
HMGN1-219ENST00000491183 FER1L6-AS2Q96M78 137 aa17.21■□□□□ 0.35
HMGN1-219ENST00000491183 SPSB2Q99619 263 aa17.21■□□□□ 0.35
HMGN1-219ENST00000491183 GPR21Q99679 349 aa17.21■□□□□ 0.35
HMGN1-219ENST00000491183 SLC26A1Q9H2B4 701 aa17.21■□□□□ 0.35
HMGN1-219ENST00000491183 CCDC68Q9H2F9 335 aa17.21■□□□□ 0.35
HMGN1-219ENST00000491183 SYNPO2LQ9H987 977 aa17.21■□□□□ 0.35
HMGN1-219ENST00000491183 FAM114A2Q9NRY5 505 aa17.21■□□□□ 0.35
HMGN1-219ENST00000491183 IARS2Q9NSE4 1012 aaKnown RBP17.21■□□□□ 0.35
HMGN1-219ENST00000491183 STOX2Q9P2F5 926 aaPredicted RBP17.21■□□□□ 0.35
HMGN1-219ENST00000491183 ZC3H7BQ9UGR2 993 aaKnown RBP17.21■□□□□ 0.35
HMGN1-219ENST00000491183 SPENQ96T58 3664 aaKnown RBP17.21■□□□□ 0.35
HMGN1-219ENST00000491183 NUP210LQ5VU65 1888 aa17.2■□□□□ 0.34
HMGN1-219ENST00000491183 RELNP78509 3460 aa17.2■□□□□ 0.34
HMGN1-219ENST00000491183 E7ENX8 843 aa17.2■□□□□ 0.34
HMGN1-219ENST00000491183 DNALI1O14645 258 aaPredicted RBP17.2■□□□□ 0.34
HMGN1-219ENST00000491183 BANF1O75531 89 aa17.2■□□□□ 0.34
HMGN1-219ENST00000491183 SORBS2O94875 1100 aaKnown RBP17.2■□□□□ 0.34
HMGN1-219ENST00000491183 RPA3P35244 121 aaPredicted RBP17.2■□□□□ 0.34
HMGN1-219ENST00000491183 TIAL1Q01085 375 aaKnown RBP eCLIP17.2■□□□□ 0.34
HMGN1-219ENST00000491183 TAP2Q03519 686 aa17.2■□□□□ 0.34
HMGN1-219ENST00000491183 SRSF1Q07955 248 aaKnown RBP eCLIP17.2■□□□□ 0.34
HMGN1-219ENST00000491183 DHX9Q08211 1270 aaKnown RBP17.2■□□□□ 0.34
HMGN1-219ENST00000491183 PTK6Q13882 451 aa17.2■□□□□ 0.34
HMGN1-219ENST00000491183 JMJD6Q6NYC1 403 aaPredicted RBP17.2■□□□□ 0.34
HMGN1-219ENST00000491183 SHISA6Q6ZSJ9 500 aa17.2■□□□□ 0.34
HMGN1-219ENST00000491183 PAQR7Q86WK9 346 aa17.2■□□□□ 0.34
HMGN1-219ENST00000491183 IGDCC3Q8IVU1 814 aa17.2■□□□□ 0.34
HMGN1-219ENST00000491183 LRRC56Q8IYG6 542 aaPredicted RBP17.2■□□□□ 0.34
HMGN1-219ENST00000491183 CPNE9Q8IYJ1 553 aa17.2■□□□□ 0.34
HMGN1-219ENST00000491183 Q8NA96 180 aa17.2■□□□□ 0.34
HMGN1-219ENST00000491183 SLCO2A1Q92959 643 aa17.2■□□□□ 0.34
HMGN1-219ENST00000491183 ZFYVE21Q9BQ24 234 aa17.2■□□□□ 0.34
HMGN1-219ENST00000491183 PLCD4Q9BRC7 762 aa17.2■□□□□ 0.34
HMGN1-219ENST00000491183 AARSD1Q9BTE6 412 aaKnown RBP17.2■□□□□ 0.34
HMGN1-219ENST00000491183 MFRPQ9BY79 579 aa17.2■□□□□ 0.34
HMGN1-219ENST00000491183 WDR54Q9H977 334 aa17.2■□□□□ 0.34
HMGN1-219ENST00000491183 MRPS30Q9NP92 439 aaKnown RBP17.2■□□□□ 0.34
HMGN1-219ENST00000491183 CTSFQ9UBX1 484 aa17.2■□□□□ 0.34
HMGN1-219ENST00000491183 ASIC3Q9UHC3 531 aa17.2■□□□□ 0.34
HMGN1-219ENST00000491183 PCYOX1Q9UHG3 505 aa17.2■□□□□ 0.34
HMGN1-219ENST00000491183 G3BP2Q9UN86 482 aaKnown RBP17.2■□□□□ 0.34
HMGN1-219ENST00000491183 COMMD10Q9Y6G5 202 aa17.2■□□□□ 0.34
HMGN1-219ENST00000491183 MAU2Q9Y6X3 613 aa17.2■□□□□ 0.34
HMGN1-219ENST00000491183 MDC1Q14676 2089 aaKnown RBP17.19■□□□□ 0.34
HMGN1-219ENST00000491183 CLEC18AA5D8T8 446 aa17.19■□□□□ 0.34
HMGN1-219ENST00000491183 VSTM2BA6NLU5 285 aa17.19■□□□□ 0.34
HMGN1-219ENST00000491183 H0YGG7 62 aa17.19■□□□□ 0.34
HMGN1-219ENST00000491183 DPM1O60762 260 aa17.19■□□□□ 0.34
HMGN1-219ENST00000491183 EIF2S1P05198 315 aaKnown RBP17.19■□□□□ 0.34
HMGN1-219ENST00000491183 ERVK-10P10266 1014 aa17.19■□□□□ 0.34
HMGN1-219ENST00000491183 ENO3P13929 434 aaPredicted RBP17.19■□□□□ 0.34
HMGN1-219ENST00000491183 TCP1P17987 556 aaKnown RBP17.19■□□□□ 0.34
HMGN1-219ENST00000491183 PGAM1P18669 254 aa17.19■□□□□ 0.34
HMGN1-219ENST00000491183 MMP11P24347 488 aa17.19■□□□□ 0.34
HMGN1-219ENST00000491183 GABRB3P28472 473 aa17.19■□□□□ 0.34
HMGN1-219ENST00000491183 HSD17B2P37059 387 aa17.19■□□□□ 0.34
HMGN1-219ENST00000491183 SOX8P57073 446 aa17.19■□□□□ 0.34
HMGN1-219ENST00000491183 ARF3P61204 181 aaPredicted RBP17.19■□□□□ 0.34
HMGN1-219ENST00000491183 PRDX1Q06830 199 aaKnown RBP17.19■□□□□ 0.34
HMGN1-219ENST00000491183 TSTA3Q13630 321 aaPredicted RBP17.19■□□□□ 0.34
HMGN1-219ENST00000491183 CRYMQ14894 314 aa17.19■□□□□ 0.34
HMGN1-219ENST00000491183 PRTGQ2VWP7 1150 aa17.19■□□□□ 0.34
HMGN1-219ENST00000491183 ZNF425Q6IV72 752 aa17.19■□□□□ 0.34
HMGN1-219ENST00000491183 CLEC18BQ6UXF7 455 aa17.19■□□□□ 0.34
HMGN1-219ENST00000491183 PIWIL4Q7Z3Z4 852 aaKnown RBP17.19■□□□□ 0.34
HMGN1-219ENST00000491183 KCNMB4Q86W47 210 aa17.19■□□□□ 0.34
HMGN1-219ENST00000491183 GALNT16Q8N428 558 aa17.19■□□□□ 0.34
HMGN1-219ENST00000491183 CLEC1AQ8NC01 280 aa17.19■□□□□ 0.34
HMGN1-219ENST00000491183 CLEC18CQ8NCF0 446 aa17.19■□□□□ 0.34
HMGN1-219ENST00000491183 C2CD4AQ8NCU7 369 aaPredicted RBP17.19■□□□□ 0.34
HMGN1-219ENST00000491183 EBNA1BP2Q99848 306 aaKnown RBP17.19■□□□□ 0.34
HMGN1-219ENST00000491183 FAM167BQ9BTA0 163 aa17.19■□□□□ 0.34
HMGN1-219ENST00000491183 ZNF552Q9H707 407 aaPredicted RBP17.19■□□□□ 0.34
HMGN1-219ENST00000491183 PLAC1Q9HBJ0 212 aa17.19■□□□□ 0.34
HMGN1-219ENST00000491183 LUZP4Q9P127 313 aa17.19■□□□□ 0.34
HMGN1-219ENST00000491183 ANKMY1Q9P2S6 941 aa17.19■□□□□ 0.34
HMGN1-219ENST00000491183 TAC3Q9UHF0 121 aa17.19■□□□□ 0.34
HMGN1-219ENST00000491183 MAP4K5Q9Y4K4 846 aa17.19■□□□□ 0.34
HMGN1-219ENST00000491183 CYSRT1A8MQ03 144 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms