RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 ZNF670Q9BS34 389 aa12.95□□□□□ -0.34
EXOSC3-207ENST00000490516 THAP2Q9H0W7 228 aa12.95□□□□□ -0.34
EXOSC3-207ENST00000490516 TP63Q9H3D4 680 aaPredicted RBP12.95□□□□□ -0.34
EXOSC3-207ENST00000490516 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.95□□□□□ -0.34
EXOSC3-207ENST00000490516 ZC3H7BQ9UGR2 993 aaKnown RBP12.95□□□□□ -0.34
EXOSC3-207ENST00000490516 POLG2Q9UHN1 485 aa12.95□□□□□ -0.34
EXOSC3-207ENST00000490516 CRLS1Q9UJA2 301 aa12.95□□□□□ -0.34
EXOSC3-207ENST00000490516 ARL5AQ9Y689 179 aa12.95□□□□□ -0.34
EXOSC3-207ENST00000490516 LOC105369274A0A096LPK9 316 aa12.94□□□□□ -0.34
EXOSC3-207ENST00000490516 A0A0A6YYK5 440 aaPredicted RBP12.94□□□□□ -0.34
EXOSC3-207ENST00000490516 LOC102723532A0A0G2JNH3 316 aa12.94□□□□□ -0.34
EXOSC3-207ENST00000490516 USP27XA6NNY8 438 aa12.94□□□□□ -0.34
EXOSC3-207ENST00000490516 H7C1Q1 480 aa12.94□□□□□ -0.34
EXOSC3-207ENST00000490516 SMAD7O15105 426 aaKnown RBP12.94□□□□□ -0.34
EXOSC3-207ENST00000490516 CDC40O60508 579 aaKnown RBP eCLIP12.94□□□□□ -0.34
EXOSC3-207ENST00000490516 NEURL1O76050 574 aa12.94□□□□□ -0.34
EXOSC3-207ENST00000490516 ACADLP28330 430 aa12.94□□□□□ -0.34
EXOSC3-207ENST00000490516 OC90Q02509 493 aaPredicted RBP12.94□□□□□ -0.34
EXOSC3-207ENST00000490516 BRD3Q15059 726 aa12.94□□□□□ -0.34
EXOSC3-207ENST00000490516 TAZQ16635 292 aa12.94□□□□□ -0.34
EXOSC3-207ENST00000490516 EMC4Q5J8M3 183 aa12.94□□□□□ -0.34
EXOSC3-207ENST00000490516 MICALCLQ6ZW33 695 aa12.94□□□□□ -0.34
EXOSC3-207ENST00000490516 OR4N4Q8N0Y3 316 aa12.94□□□□□ -0.34
EXOSC3-207ENST00000490516 OR4K2Q8NGD2 314 aa12.94□□□□□ -0.34
EXOSC3-207ENST00000490516 OR5K2Q8NHB8 316 aa12.94□□□□□ -0.34
EXOSC3-207ENST00000490516 FAF2Q96CS3 445 aa12.94□□□□□ -0.34
EXOSC3-207ENST00000490516 C10orf90Q96M02 699 aa12.94□□□□□ -0.34
EXOSC3-207ENST00000490516 CIDEBQ9UHD4 219 aa12.94□□□□□ -0.34
EXOSC3-207ENST00000490516 HEY1Q9Y5J3 304 aa12.94□□□□□ -0.34
EXOSC3-207ENST00000490516 GABRR3A8MPY1 467 aa12.93□□□□□ -0.34
EXOSC3-207ENST00000490516 AGAP14A8MT82 685 aa12.93□□□□□ -0.34
EXOSC3-207ENST00000490516 NRP2O60462 931 aa12.93□□□□□ -0.34
EXOSC3-207ENST00000490516 EIF2S1P05198 315 aaKnown RBP12.93□□□□□ -0.34
EXOSC3-207ENST00000490516 CCDC172P0C7W6 258 aa12.93□□□□□ -0.34
EXOSC3-207ENST00000490516 RFC3P40938 356 aa12.93□□□□□ -0.34
EXOSC3-207ENST00000490516 XIAPP98170 497 aa12.93□□□□□ -0.34
EXOSC3-207ENST00000490516 SLC1A5Q15758 541 aa12.93□□□□□ -0.34
EXOSC3-207ENST00000490516 MEP1AQ16819 746 aa12.93□□□□□ -0.34
EXOSC3-207ENST00000490516 LIX1LQ8IVB5 337 aa12.93□□□□□ -0.34
EXOSC3-207ENST00000490516 PLD5Q8N7P1 536 aa12.93□□□□□ -0.34
EXOSC3-207ENST00000490516 OR10Q1Q8NGQ4 319 aa12.93□□□□□ -0.34
EXOSC3-207ENST00000490516 MRGPRX2Q96LB1 330 aa12.93□□□□□ -0.34
EXOSC3-207ENST00000490516 COPS8Q99627 209 aa12.93□□□□□ -0.34
EXOSC3-207ENST00000490516 OLFM1Q99784 485 aa12.93□□□□□ -0.34
EXOSC3-207ENST00000490516 KCNK13Q9HB14 408 aa12.93□□□□□ -0.34
EXOSC3-207ENST00000490516 C14orf105Q9NVL8 296 aa12.93□□□□□ -0.34
EXOSC3-207ENST00000490516 FAM153AQ9UHL3 310 aa12.93□□□□□ -0.34
EXOSC3-207ENST00000490516 CBLCQ9ULV8 474 aa12.93□□□□□ -0.34
EXOSC3-207ENST00000490516 A0A0J9YVX5 310 aa12.92□□□□□ -0.34
EXOSC3-207ENST00000490516 CFAP99D6REC4 459 aa12.92□□□□□ -0.34
EXOSC3-207ENST00000490516 TFECO14948 347 aaPredicted RBP12.92□□□□□ -0.34
EXOSC3-207ENST00000490516 NME2P1O60361 137 aa12.92□□□□□ -0.34
EXOSC3-207ENST00000490516 SRPX2O60687 465 aaPredicted RBP12.92□□□□□ -0.34
EXOSC3-207ENST00000490516 SUN1O94901 812 aa12.92□□□□□ -0.34
EXOSC3-207ENST00000490516 AP2A1O95782 977 aa12.92□□□□□ -0.34
EXOSC3-207ENST00000490516 GZMAP12544 262 aa12.92□□□□□ -0.34
EXOSC3-207ENST00000490516 CDK11BP21127 795 aaKnown RBP12.92□□□□□ -0.34
EXOSC3-207ENST00000490516 NME2P22392 152 aa12.92□□□□□ -0.34
EXOSC3-207ENST00000490516 PKLRP30613 574 aa12.92□□□□□ -0.34
EXOSC3-207ENST00000490516 CD68P34810 354 aaPredicted RBP12.92□□□□□ -0.34
EXOSC3-207ENST00000490516 NR0B1P51843 470 aaKnown RBP12.92□□□□□ -0.34
EXOSC3-207ENST00000490516 PCBP2Q15366 365 aaKnown RBP eCLIP12.92□□□□□ -0.34
EXOSC3-207ENST00000490516 SYT16Q17RD7 645 aa12.92□□□□□ -0.34
EXOSC3-207ENST00000490516 TEX44Q53QW1 395 aa12.92□□□□□ -0.34
EXOSC3-207ENST00000490516 ZNF468Q5VIY5 522 aaPredicted RBP12.92□□□□□ -0.34
EXOSC3-207ENST00000490516 SHEQ5VZ18 495 aa12.92□□□□□ -0.34
EXOSC3-207ENST00000490516 PLAG1Q6DJT9 500 aa12.92□□□□□ -0.34
EXOSC3-207ENST00000490516 UNC5DQ6UXZ4 953 aa12.92□□□□□ -0.34
EXOSC3-207ENST00000490516 LANCL3Q6ZV70 420 aa12.92□□□□□ -0.34
EXOSC3-207ENST00000490516 ACAD11Q709F0 780 aa12.92□□□□□ -0.34
EXOSC3-207ENST00000490516 VWA5B2Q8N398 1253 aa12.92□□□□□ -0.34
EXOSC3-207ENST00000490516 CLDN19Q8N6F1 224 aa12.92□□□□□ -0.34
EXOSC3-207ENST00000490516 AMER3Q8N944 861 aa12.92□□□□□ -0.34
EXOSC3-207ENST00000490516 SIMC1Q8NDZ2 872 aa12.92□□□□□ -0.34
EXOSC3-207ENST00000490516 ARMC2Q8NEN0 867 aa12.92□□□□□ -0.34
EXOSC3-207ENST00000490516 OR5M3Q8NGP4 307 aa12.92□□□□□ -0.34
EXOSC3-207ENST00000490516 VPS37BQ9H9H4 285 aa12.92□□□□□ -0.34
EXOSC3-207ENST00000490516 LUC7LQ9NQ29 371 aaKnown RBP12.92□□□□□ -0.34
EXOSC3-207ENST00000490516 INTS7Q9NVH2 962 aaKnown RBP12.92□□□□□ -0.34
EXOSC3-207ENST00000490516 IP6K2Q9UHH9 426 aa12.92□□□□□ -0.34
EXOSC3-207ENST00000490516 ANAPC7Q9UJX3 599 aa12.92□□□□□ -0.34
EXOSC3-207ENST00000490516 CUBNO60494 3623 aa12.92□□□□□ -0.34
EXOSC3-207ENST00000490516 DDX3XO00571 662 aaKnown RBP eCLIP12.91□□□□□ -0.34
EXOSC3-207ENST00000490516 HS6ST1O60243 411 aa12.91□□□□□ -0.34
EXOSC3-207ENST00000490516 SLC25A12O75746 678 aa12.91□□□□□ -0.34
EXOSC3-207ENST00000490516 PDE9AO76083 593 aa12.91□□□□□ -0.34
EXOSC3-207ENST00000490516 C8orf89P0DMQ9 161 aa12.91□□□□□ -0.34
EXOSC3-207ENST00000490516 MYBL1P10243 752 aa12.91□□□□□ -0.34
EXOSC3-207ENST00000490516 TFEBP19484 476 aa12.91□□□□□ -0.34
EXOSC3-207ENST00000490516 NFKB1P19838 968 aa12.91□□□□□ -0.34
EXOSC3-207ENST00000490516 PTPN3P26045 913 aa12.91□□□□□ -0.34
EXOSC3-207ENST00000490516 PRKCIP41743 596 aa12.91□□□□□ -0.34
EXOSC3-207ENST00000490516 CDKN1CP49918 316 aaPredicted RBP12.91□□□□□ -0.34
EXOSC3-207ENST00000490516 DCAF7P61962 342 aa12.91□□□□□ -0.34
EXOSC3-207ENST00000490516 PDK2Q15119 407 aa12.91□□□□□ -0.34
EXOSC3-207ENST00000490516 SF1Q15637 639 aaKnown RBP12.91□□□□□ -0.34
EXOSC3-207ENST00000490516 HADHQ16836 314 aaKnown RBP12.91□□□□□ -0.34
EXOSC3-207ENST00000490516 MUM1Q2TAK8 710 aa12.91□□□□□ -0.34
EXOSC3-207ENST00000490516 CMPK2Q5EBM0 449 aa12.91□□□□□ -0.34
EXOSC3-207ENST00000490516 NPNTQ6UXI9 565 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms