RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 LGALS12Q96DT0 336 aa3.52□□□□□ -1.85
CD46-216ENST00000490278 DUX3Q96PT4 197 aa3.52□□□□□ -1.85
CD46-216ENST00000490278 ADPGKQ9BRR6 497 aa3.52□□□□□ -1.85
CD46-216ENST00000490278 FSD1Q9BTV5 496 aa3.52□□□□□ -1.85
CD46-216ENST00000490278 PITPNM3Q9BZ71 974 aa3.52□□□□□ -1.85
CD46-216ENST00000490278 SHARPINQ9H0F6 387 aa3.52□□□□□ -1.85
CD46-216ENST00000490278 INTS10Q9NVR2 710 aaKnown RBP3.52□□□□□ -1.85
CD46-216ENST00000490278 C2orf42Q9NWW7 574 aa3.52□□□□□ -1.85
CD46-216ENST00000490278 GAB2Q9UQC2 676 aa3.52□□□□□ -1.85
CD46-216ENST00000490278 POMT1Q9Y6A1 747 aa3.52□□□□□ -1.85
CD46-216ENST00000490278 WDR81Q562E7 1941 aa3.52□□□□□ -1.85
CD46-216ENST00000490278 A0A1W2PPW3 197 aa3.51□□□□□ -1.85
CD46-216ENST00000490278 HHLA1C9JL84 531 aa3.51□□□□□ -1.85
CD46-216ENST00000490278 GLRA3O75311 464 aa3.51□□□□□ -1.85
CD46-216ENST00000490278 DDHD2O94830 711 aa3.51□□□□□ -1.85
CD46-216ENST00000490278 AP2A2O94973 939 aa3.51□□□□□ -1.85
CD46-216ENST00000490278 APOHP02749 345 aaPredicted RBP3.51□□□□□ -1.85
CD46-216ENST00000490278 GPIP06744 558 aa3.51□□□□□ -1.85
CD46-216ENST00000490278 FAM58BPP0C7Q3 252 aa3.51□□□□□ -1.85
CD46-216ENST00000490278 FAM157CP0CG43 387 aa3.51□□□□□ -1.85
CD46-216ENST00000490278 GP1BBP13224 206 aa3.51□□□□□ -1.85
CD46-216ENST00000490278 GNB3P16520 340 aa3.51□□□□□ -1.85
CD46-216ENST00000490278 GLIPR1P48060 266 aa3.51□□□□□ -1.85
CD46-216ENST00000490278 MTCP1P56278 107 aa3.51□□□□□ -1.85
CD46-216ENST00000490278 GCNT1Q02742 428 aa3.51□□□□□ -1.85
CD46-216ENST00000490278 SCARB2Q14108 478 aa3.51□□□□□ -1.85
CD46-216ENST00000490278 NONOQ15233 471 aaKnown RBP eCLIP3.51□□□□□ -1.85
CD46-216ENST00000490278 TEAD2Q15562 447 aa3.51□□□□□ -1.85
CD46-216ENST00000490278 CTU2Q2VPK5 515 aaKnown RBP3.51□□□□□ -1.85
CD46-216ENST00000490278 XKR6Q5GH73 641 aa3.51□□□□□ -1.85
CD46-216ENST00000490278 SLC25A53Q5H9E4 307 aa3.51□□□□□ -1.85
CD46-216ENST00000490278 LRRC73Q5JTD7 316 aa3.51□□□□□ -1.85
CD46-216ENST00000490278 HECTD3Q5T447 861 aa3.51□□□□□ -1.85
CD46-216ENST00000490278 ARHGAP17Q68EM7 881 aa3.51□□□□□ -1.85
CD46-216ENST00000490278 SHQ1Q6PI26 577 aaKnown RBP3.51□□□□□ -1.85
CD46-216ENST00000490278 Q6ZTC4 211 aa3.51□□□□□ -1.85
CD46-216ENST00000490278 G2E3Q7L622 706 aa3.51□□□□□ -1.85
CD46-216ENST00000490278 NRARPQ7Z6K4 114 aa3.51□□□□□ -1.85
CD46-216ENST00000490278 KIRREL3Q8IZU9 778 aa3.51□□□□□ -1.85
CD46-216ENST00000490278 OR2T11Q8NH01 316 aa3.51□□□□□ -1.85
CD46-216ENST00000490278 OCC1Q8TAD7 63 aa3.51□□□□□ -1.85
CD46-216ENST00000490278 DYRK2Q92630 601 aa3.51□□□□□ -1.85
CD46-216ENST00000490278 RAD54LQ92698 747 aa3.51□□□□□ -1.85
CD46-216ENST00000490278 ERO1AQ96HE7 468 aa3.51□□□□□ -1.85
CD46-216ENST00000490278 MAP3K3Q99759 626 aa3.51□□□□□ -1.85
CD46-216ENST00000490278 CITED2Q99967 270 aaPredicted RBP3.51□□□□□ -1.85
CD46-216ENST00000490278 CCDC3Q9BQI4 270 aa3.51□□□□□ -1.85
CD46-216ENST00000490278 INPP5KQ9BT40 448 aa3.51□□□□□ -1.85
CD46-216ENST00000490278 THUMPD3Q9BV44 507 aaKnown RBP3.51□□□□□ -1.85
CD46-216ENST00000490278 SNX25Q9H3E2 840 aa3.51□□□□□ -1.85
CD46-216ENST00000490278 ZNF696Q9H7X3 374 aa3.51□□□□□ -1.85
CD46-216ENST00000490278 ZWILCHQ9H900 591 aa3.51□□□□□ -1.85
CD46-216ENST00000490278 PPANQ9NQ55 473 aaKnown RBP3.51□□□□□ -1.85
CD46-216ENST00000490278 ZNF71Q9NQZ8 489 aaPredicted RBP3.51□□□□□ -1.85
CD46-216ENST00000490278 TXLNGQ9NUQ3 528 aa3.51□□□□□ -1.85
CD46-216ENST00000490278 GTF3C4Q9UKN8 822 aa3.51□□□□□ -1.85
CD46-216ENST00000490278 CHKBQ9Y259 395 aa3.51□□□□□ -1.85
CD46-216ENST00000490278 FAM86B1E9PN63 330 aa3.5□□□□□ -1.85
CD46-216ENST00000490278 EPHB6O15197 1021 aa3.5□□□□□ -1.85
CD46-216ENST00000490278 CDC123O75794 336 aaPredicted RBP3.5□□□□□ -1.85
CD46-216ENST00000490278 CDK2AP2O75956 126 aa3.5□□□□□ -1.85
CD46-216ENST00000490278 ZFYP08048 801 aaPredicted RBP3.5□□□□□ -1.85
CD46-216ENST00000490278 HSP90AB1P08238 724 aaKnown RBP3.5□□□□□ -1.85
CD46-216ENST00000490278 HMBSP08397 361 aa3.5□□□□□ -1.85
CD46-216ENST00000490278 VIMP08670 466 aaKnown RBP3.5□□□□□ -1.85
CD46-216ENST00000490278 FAM86B2P0C5J1 330 aa3.5□□□□□ -1.85
CD46-216ENST00000490278 CFC1BP0CG36 223 aa3.5□□□□□ -1.85
CD46-216ENST00000490278 CFC1P0CG37 223 aa3.5□□□□□ -1.85
CD46-216ENST00000490278 SPP1P10451 314 aa3.5□□□□□ -1.85
CD46-216ENST00000490278 CEACAM1P13688 526 aa3.5□□□□□ -1.85
CD46-216ENST00000490278 EPORP19235 508 aa3.5□□□□□ -1.85
CD46-216ENST00000490278 MFAP3P55082 362 aa3.5□□□□□ -1.85
CD46-216ENST00000490278 GNB1P62873 340 aa3.5□□□□□ -1.85
CD46-216ENST00000490278 SCN1BQ07699 218 aa3.5□□□□□ -1.85
CD46-216ENST00000490278 RASGEF1BQ0VAM2 473 aa3.5□□□□□ -1.85
CD46-216ENST00000490278 TRAP1Q12931 704 aaKnown RBP3.5□□□□□ -1.85
CD46-216ENST00000490278 CCDC6Q16204 474 aa3.5□□□□□ -1.85
CD46-216ENST00000490278 FFAR4Q5NUL3 377 aa3.5□□□□□ -1.85
CD46-216ENST00000490278 LCN1P1Q5VSP4 162 aa3.5□□□□□ -1.85
CD46-216ENST00000490278 UGT3A1Q6NUS8 523 aa3.5□□□□□ -1.85
CD46-216ENST00000490278 IL17RELQ6ZVW7 336 aa3.5□□□□□ -1.85
CD46-216ENST00000490278 ANKRD23Q86SG2 305 aa3.5□□□□□ -1.85
CD46-216ENST00000490278 AMIGO1Q86WK6 493 aa3.5□□□□□ -1.85
CD46-216ENST00000490278 OR8H3Q8N146 312 aa3.5□□□□□ -1.85
CD46-216ENST00000490278 NIPA2Q8N8Q9 360 aa3.5□□□□□ -1.85
CD46-216ENST00000490278 TMEM178AQ8NBL3 297 aa3.5□□□□□ -1.85
CD46-216ENST00000490278 HEXDCQ8WVB3 486 aa3.5□□□□□ -1.85
CD46-216ENST00000490278 PGM2Q96G03 612 aa3.5□□□□□ -1.85
CD46-216ENST00000490278 LRR1Q96L50 414 aa3.5□□□□□ -1.85
CD46-216ENST00000490278 INTS14Q96SY0 518 aa3.5□□□□□ -1.85
CD46-216ENST00000490278 FAM49AQ9H0Q0 323 aaPredicted RBP3.5□□□□□ -1.85
CD46-216ENST00000490278 GRPEL1Q9HAV7 217 aa3.5□□□□□ -1.85
CD46-216ENST00000490278 OR6C2Q9NZP2 312 aa3.5□□□□□ -1.85
CD46-216ENST00000490278 C19orf25Q9UFG5 118 aaPredicted RBP3.5□□□□□ -1.85
CD46-216ENST00000490278 MAN1B1Q9UKM7 699 aa3.5□□□□□ -1.85
CD46-216ENST00000490278 IGHV4-4A0A075B6R2 117 aa3.49□□□□□ -1.85
CD46-216ENST00000490278 SLCO1B7G3V0H7 640 aa3.49□□□□□ -1.85
CD46-216ENST00000490278 PSMD14O00487 310 aa3.49□□□□□ -1.85
CD46-216ENST00000490278 PGLSO95336 258 aa3.49□□□□□ -1.85
CD46-216ENST00000490278 RPN1P04843 607 aaKnown RBP3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms