RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 ANKRD54Q6NXT1 300 aa3.07□□□□□ -1.92
DEPDC1-204ENST00000489862 AFTPHQ6ULP2 937 aa3.07□□□□□ -1.92
DEPDC1-204ENST00000489862 SLC36A4Q6YBV0 504 aa3.07□□□□□ -1.92
DEPDC1-204ENST00000489862 CACNA2D4Q7Z3S7 1137 aa3.07□□□□□ -1.92
DEPDC1-204ENST00000489862 CTAGE6Q86UF2 777 aa3.07□□□□□ -1.92
DEPDC1-204ENST00000489862 DENND6AQ8IWF6 608 aa3.07□□□□□ -1.92
DEPDC1-204ENST00000489862 CTAGE4Q8IX94 777 aa3.07□□□□□ -1.92
DEPDC1-204ENST00000489862 TIGD4Q8IY51 512 aa3.07□□□□□ -1.92
DEPDC1-204ENST00000489862 ZNF679Q8IYX0 411 aa3.07□□□□□ -1.92
DEPDC1-204ENST00000489862 ZBTB2Q8N680 514 aa3.07□□□□□ -1.92
DEPDC1-204ENST00000489862 RASGEF1AQ8N9B8 481 aa3.07□□□□□ -1.92
DEPDC1-204ENST00000489862 TMEM185AQ8NFB2 350 aa3.07□□□□□ -1.92
DEPDC1-204ENST00000489862 TSPAN14Q8NG11 270 aa3.07□□□□□ -1.92
DEPDC1-204ENST00000489862 SGCDQ92629 289 aa3.07□□□□□ -1.92
DEPDC1-204ENST00000489862 RAD54LQ92698 747 aa3.07□□□□□ -1.92
DEPDC1-204ENST00000489862 SLAMF9Q96A28 289 aa3.07□□□□□ -1.92
DEPDC1-204ENST00000489862 AP2M1Q96CW1 435 aa3.07□□□□□ -1.92
DEPDC1-204ENST00000489862 SNRNP40Q96DI7 357 aaKnown RBP3.07□□□□□ -1.92
DEPDC1-204ENST00000489862 CDCA5Q96FF9 252 aa3.07□□□□□ -1.92
DEPDC1-204ENST00000489862 TMEM68Q96MH6 324 aa3.07□□□□□ -1.92
DEPDC1-204ENST00000489862 TTC25Q96NG3 672 aa3.07□□□□□ -1.92
DEPDC1-204ENST00000489862 QRFPRQ96P65 431 aa3.07□□□□□ -1.92
DEPDC1-204ENST00000489862 GSDMAQ96QA5 445 aa3.07□□□□□ -1.92
DEPDC1-204ENST00000489862 DDOQ99489 341 aa3.07□□□□□ -1.92
DEPDC1-204ENST00000489862 MXRA8Q9BRK3 442 aa3.07□□□□□ -1.92
DEPDC1-204ENST00000489862 TRIM2Q9C040 744 aa3.07□□□□□ -1.92
DEPDC1-204ENST00000489862 RPAP3Q9H6T3 665 aaPredicted RBP3.07□□□□□ -1.92
DEPDC1-204ENST00000489862 EVA1AQ9H8M9 152 aa3.07□□□□□ -1.92
DEPDC1-204ENST00000489862 SFXN1Q9H9B4 322 aa3.07□□□□□ -1.92
DEPDC1-204ENST00000489862 RNPEPL1Q9HAU8 725 aa3.07□□□□□ -1.92
DEPDC1-204ENST00000489862 KCNMB3Q9NPA1 279 aa3.07□□□□□ -1.92
DEPDC1-204ENST00000489862 HPS4Q9NQG7 708 aa3.07□□□□□ -1.92
DEPDC1-204ENST00000489862 GRHL1Q9NZI5 618 aa3.07□□□□□ -1.92
DEPDC1-204ENST00000489862 OR6C3Q9NZP0 311 aa3.07□□□□□ -1.92
DEPDC1-204ENST00000489862 NDUFA13Q9P0J0 144 aa3.07□□□□□ -1.92
DEPDC1-204ENST00000489862 PLEKHB1Q9UF11 243 aaPredicted RBP3.07□□□□□ -1.92
DEPDC1-204ENST00000489862 FBXO40Q9UH90 709 aa3.07□□□□□ -1.92
DEPDC1-204ENST00000489862 DDX25Q9UHL0 483 aaKnown RBP3.07□□□□□ -1.92
DEPDC1-204ENST00000489862 IPO11Q9UI26 975 aaKnown RBP3.07□□□□□ -1.92
DEPDC1-204ENST00000489862 SLC24A2Q9UI40 661 aa3.07□□□□□ -1.92
DEPDC1-204ENST00000489862 UTS2RQ9UKP6 389 aa3.07□□□□□ -1.92
DEPDC1-204ENST00000489862 SETBP1Q9Y6X0 1596 aa3.07□□□□□ -1.92
DEPDC1-204ENST00000489862 MAU2Q9Y6X3 613 aa3.07□□□□□ -1.92
DEPDC1-204ENST00000489862 A0A0U1RQF3 1178 aa3.06□□□□□ -1.92
DEPDC1-204ENST00000489862 A0A1B0GWJ7 208 aa3.06□□□□□ -1.92
DEPDC1-204ENST00000489862 C17orf102A2RUQ5 167 aa3.06□□□□□ -1.92
DEPDC1-204ENST00000489862 TRIM49BA6NDI0 452 aa3.06□□□□□ -1.92
DEPDC1-204ENST00000489862 HEPACAM2A8MVW5 462 aa3.06□□□□□ -1.92
DEPDC1-204ENST00000489862 H0YGN5 161 aa3.06□□□□□ -1.92
DEPDC1-204ENST00000489862 AP5Z1O43299 807 aa3.06□□□□□ -1.92
DEPDC1-204ENST00000489862 GMFGO60234 142 aa3.06□□□□□ -1.92
DEPDC1-204ENST00000489862 PAHP00439 452 aa3.06□□□□□ -1.92
DEPDC1-204ENST00000489862 IL1AP01583 271 aa3.06□□□□□ -1.92
DEPDC1-204ENST00000489862 PCCBP05166 539 aa3.06□□□□□ -1.92
DEPDC1-204ENST00000489862 LINGO3P0C6S8 592 aa3.06□□□□□ -1.92
DEPDC1-204ENST00000489862 T-ENOLP0DO92 83 aa3.06□□□□□ -1.92
DEPDC1-204ENST00000489862 CCDC192P0DO97 292 aa3.06□□□□□ -1.92
DEPDC1-204ENST00000489862 CCNCP24863 283 aa3.06□□□□□ -1.92
DEPDC1-204ENST00000489862 KLRC2P26717 231 aa3.06□□□□□ -1.92
DEPDC1-204ENST00000489862 PRDX6P30041 224 aa3.06□□□□□ -1.92
DEPDC1-204ENST00000489862 CORO1AP31146 461 aaKnown RBP3.06□□□□□ -1.92
DEPDC1-204ENST00000489862 SOAT1P35610 550 aa3.06□□□□□ -1.92
DEPDC1-204ENST00000489862 ASMTP46597 345 aa3.06□□□□□ -1.92
DEPDC1-204ENST00000489862 P2RX3P56373 397 aa3.06□□□□□ -1.92
DEPDC1-204ENST00000489862 TNFRSF17Q02223 184 aa3.06□□□□□ -1.92
DEPDC1-204ENST00000489862 EGR4Q05215 589 aa3.06□□□□□ -1.92
DEPDC1-204ENST00000489862 SNTB2Q13425 540 aaKnown RBP3.06□□□□□ -1.92
DEPDC1-204ENST00000489862 TNK1Q13470 666 aa3.06□□□□□ -1.92
DEPDC1-204ENST00000489862 SNX1Q13596 522 aa3.06□□□□□ -1.92
DEPDC1-204ENST00000489862 PKP1Q13835 747 aa3.06□□□□□ -1.92
DEPDC1-204ENST00000489862 CCDC57Q2TAC2 916 aa3.06□□□□□ -1.92
DEPDC1-204ENST00000489862 FASTKD1Q53R41 847 aaKnown RBP3.06□□□□□ -1.92
DEPDC1-204ENST00000489862 PIK3CD-AS1Q5SR53 167 aa3.06□□□□□ -1.92
DEPDC1-204ENST00000489862 KCTD11Q693B1 232 aa3.06□□□□□ -1.92
DEPDC1-204ENST00000489862 RAET1GQ6H3X3 334 aa3.06□□□□□ -1.92
DEPDC1-204ENST00000489862 DHRS7BQ6IAN0 325 aaPredicted RBP3.06□□□□□ -1.92
DEPDC1-204ENST00000489862 FIGLAQ6QHK4 219 aa3.06□□□□□ -1.92
DEPDC1-204ENST00000489862 ZNF474Q6S9Z5 364 aaPredicted RBP3.06□□□□□ -1.92
DEPDC1-204ENST00000489862 LRIG3Q6UXM1 1119 aa3.06□□□□□ -1.92
DEPDC1-204ENST00000489862 C11orf57Q6ZUT1 292 aaPredicted RBP3.06□□□□□ -1.92
DEPDC1-204ENST00000489862 DPPA4Q7L190 304 aa3.06□□□□□ -1.92
DEPDC1-204ENST00000489862 ZNF573Q86YE8 665 aa3.06□□□□□ -1.92
DEPDC1-204ENST00000489862 BATF2Q8N1L9 274 aa3.06□□□□□ -1.92
DEPDC1-204ENST00000489862 ZCCHC9Q8N567 271 aaKnown RBP3.06□□□□□ -1.92
DEPDC1-204ENST00000489862 RBMXL3Q8N7X1 1067 aaKnown RBP3.06□□□□□ -1.92
DEPDC1-204ENST00000489862 SRFBP1Q8NEF9 429 aaKnown RBP3.06□□□□□ -1.92
DEPDC1-204ENST00000489862 GJC3Q8NFK1 279 aa3.06□□□□□ -1.92
DEPDC1-204ENST00000489862 TRIM58Q8NG06 486 aa3.06□□□□□ -1.92
DEPDC1-204ENST00000489862 OR2T3Q8NH03 318 aa3.06□□□□□ -1.92
DEPDC1-204ENST00000489862 NCOA7Q8NI08 942 aa3.06□□□□□ -1.92
DEPDC1-204ENST00000489862 TRPC4APQ8TEL6 797 aa3.06□□□□□ -1.92
DEPDC1-204ENST00000489862 NOC3LQ8WTT2 800 aaKnown RBP3.06□□□□□ -1.92
DEPDC1-204ENST00000489862 ESAMQ96AP7 390 aa3.06□□□□□ -1.92
DEPDC1-204ENST00000489862 PRICKLE1Q96MT3 831 aaPredicted RBP3.06□□□□□ -1.92
DEPDC1-204ENST00000489862 RBM14Q96PK6 669 aaKnown RBP3.06□□□□□ -1.92
DEPDC1-204ENST00000489862 CPNE1Q99829 537 aa3.06□□□□□ -1.92
DEPDC1-204ENST00000489862 TMEM47Q9BQJ4 181 aa3.06□□□□□ -1.92
DEPDC1-204ENST00000489862 C1QTNF1Q9BXJ1 281 aa3.06□□□□□ -1.92
DEPDC1-204ENST00000489862 KCNN2Q9H2S1 579 aa3.06□□□□□ -1.92
DEPDC1-204ENST00000489862 RMND5AQ9H871 391 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms