RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 OR4E2Q8NGC2 313 aa10.21□□□□□ -0.77
SCAMP4-208ENST00000489554 OR8K5Q8NH50 307 aa10.21□□□□□ -0.77
SCAMP4-208ENST00000489554 DENND1AQ8TEH3 1009 aa10.21□□□□□ -0.77
SCAMP4-208ENST00000489554 EEF1AKMT1Q8WVE0 214 aa10.21□□□□□ -0.77
SCAMP4-208ENST00000489554 ELMO1Q92556 727 aa10.21□□□□□ -0.77
SCAMP4-208ENST00000489554 INPP5DQ92835 1189 aa10.21□□□□□ -0.77
SCAMP4-208ENST00000489554 EXTL1Q92935 676 aa10.21□□□□□ -0.77
SCAMP4-208ENST00000489554 PTERQ96BW5 349 aa10.21□□□□□ -0.77
SCAMP4-208ENST00000489554 NXNL1Q96CM4 212 aa10.21□□□□□ -0.77
SCAMP4-208ENST00000489554 TSPAN17Q96FV3 270 aa10.21□□□□□ -0.77
SCAMP4-208ENST00000489554 PDLIM5Q96HC4 596 aaKnown RBP10.21□□□□□ -0.77
SCAMP4-208ENST00000489554 APOPT1Q96IL0 206 aa10.21□□□□□ -0.77
SCAMP4-208ENST00000489554 CATSPER2Q96P56 530 aa10.21□□□□□ -0.77
SCAMP4-208ENST00000489554 PANX3Q96QZ0 392 aa10.21□□□□□ -0.77
SCAMP4-208ENST00000489554 FAM107BQ9H098 131 aa10.21□□□□□ -0.77
SCAMP4-208ENST00000489554 CCDC68Q9H2F9 335 aa10.21□□□□□ -0.77
SCAMP4-208ENST00000489554 GPAMQ9HCL2 828 aa10.21□□□□□ -0.77
SCAMP4-208ENST00000489554 SSU72Q9NP77 194 aaKnown RBP10.21□□□□□ -0.77
SCAMP4-208ENST00000489554 C1GALT1Q9NS00 363 aa10.21□□□□□ -0.77
SCAMP4-208ENST00000489554 FGF21Q9NSA1 209 aa10.21□□□□□ -0.77
SCAMP4-208ENST00000489554 LNPEPQ9UIQ6 1025 aa10.21□□□□□ -0.77
SCAMP4-208ENST00000489554 TRMT6Q9UJA5 497 aaKnown RBP10.21□□□□□ -0.77
SCAMP4-208ENST00000489554 POMT2Q9UKY4 750 aa10.21□□□□□ -0.77
SCAMP4-208ENST00000489554 MGAQ8IWI9 3026 aa10.2□□□□□ -0.78
SCAMP4-208ENST00000489554 A0A087X1B8 175 aa10.2□□□□□ -0.78
SCAMP4-208ENST00000489554 GSAPA4D1B5 854 aa10.2□□□□□ -0.78
SCAMP4-208ENST00000489554 E5RI56 91 aa10.2□□□□□ -0.78
SCAMP4-208ENST00000489554 PRPF4O43172 522 aaKnown RBP eCLIP10.2□□□□□ -0.78
SCAMP4-208ENST00000489554 MAP3K7O43318 606 aa10.2□□□□□ -0.78
SCAMP4-208ENST00000489554 KDM1AO60341 852 aa10.2□□□□□ -0.78
SCAMP4-208ENST00000489554 SPAG7O75391 227 aa10.2□□□□□ -0.78
SCAMP4-208ENST00000489554 KLHL2O95198 593 aa10.2□□□□□ -0.78
SCAMP4-208ENST00000489554 CCNYL3P0C7X3 344 aa10.2□□□□□ -0.78
SCAMP4-208ENST00000489554 EBLN1P0CF75 366 aa10.2□□□□□ -0.78
SCAMP4-208ENST00000489554 CCDC166P0CW27 439 aa10.2□□□□□ -0.78
SCAMP4-208ENST00000489554 FOLR1P15328 257 aa10.2□□□□□ -0.78
SCAMP4-208ENST00000489554 CD1DP15813 335 aa10.2□□□□□ -0.78
SCAMP4-208ENST00000489554 ZNF28P17035 718 aa10.2□□□□□ -0.78
SCAMP4-208ENST00000489554 POLR2CP19387 275 aaPredicted RBP10.2□□□□□ -0.78
SCAMP4-208ENST00000489554 HPDP32754 393 aaPredicted RBP10.2□□□□□ -0.78
SCAMP4-208ENST00000489554 CRHR1P34998 444 aa10.2□□□□□ -0.78
SCAMP4-208ENST00000489554 ETV4P43268 484 aa10.2□□□□□ -0.78
SCAMP4-208ENST00000489554 KCNC1P48547 511 aa10.2□□□□□ -0.78
SCAMP4-208ENST00000489554 KPNA2P52292 529 aaKnown RBP10.2□□□□□ -0.78
SCAMP4-208ENST00000489554 GYS2P54840 703 aa10.2□□□□□ -0.78
SCAMP4-208ENST00000489554 CYP4F2P78329 520 aa10.2□□□□□ -0.78
SCAMP4-208ENST00000489554 PDAP1Q13442 181 aaKnown RBP10.2□□□□□ -0.78
SCAMP4-208ENST00000489554 KCNAB1Q14722 419 aa10.2□□□□□ -0.78
SCAMP4-208ENST00000489554 TBR1Q16650 682 aa10.2□□□□□ -0.78
SCAMP4-208ENST00000489554 LINC00303Q3SY05 128 aa10.2□□□□□ -0.78
SCAMP4-208ENST00000489554 CRTC2Q53ET0 693 aaPredicted RBP10.2□□□□□ -0.78
SCAMP4-208ENST00000489554 AMIGO1Q86WK6 493 aa10.2□□□□□ -0.78
SCAMP4-208ENST00000489554 TBC1D21Q8IYX1 336 aa10.2□□□□□ -0.78
SCAMP4-208ENST00000489554 SLC22A15Q8IZD6 547 aa10.2□□□□□ -0.78
SCAMP4-208ENST00000489554 GALNT6Q8NCL4 622 aa10.2□□□□□ -0.78
SCAMP4-208ENST00000489554 PHC3Q8NDX5 983 aa10.2□□□□□ -0.78
SCAMP4-208ENST00000489554 OR52E1Q8NGJ3 308 aa10.2□□□□□ -0.78
SCAMP4-208ENST00000489554 DLG3Q92796 817 aa10.2□□□□□ -0.78
SCAMP4-208ENST00000489554 HGH1Q9BTY7 390 aa10.2□□□□□ -0.78
SCAMP4-208ENST00000489554 UNKQ9C0B0 810 aaKnown RBP10.2□□□□□ -0.78
SCAMP4-208ENST00000489554 DERL2Q9GZP9 239 aa10.2□□□□□ -0.78
SCAMP4-208ENST00000489554 VPS11Q9H270 941 aa10.2□□□□□ -0.78
SCAMP4-208ENST00000489554 SYTL2Q9HCH5 934 aa10.2□□□□□ -0.78
SCAMP4-208ENST00000489554 SOHLH2Q9NX45 425 aa10.2□□□□□ -0.78
SCAMP4-208ENST00000489554 TMEM216Q9P0N5 145 aa10.2□□□□□ -0.78
SCAMP4-208ENST00000489554 SLC17A7Q9P2U7 560 aa10.2□□□□□ -0.78
SCAMP4-208ENST00000489554 POLG2Q9UHN1 485 aa10.2□□□□□ -0.78
SCAMP4-208ENST00000489554 ASF1AQ9Y294 204 aa10.2□□□□□ -0.78
SCAMP4-208ENST00000489554 BTRCQ9Y297 605 aa10.2□□□□□ -0.78
SCAMP4-208ENST00000489554 ACOT9Q9Y305 439 aa10.2□□□□□ -0.78
SCAMP4-208ENST00000489554 C2orf74A8MZ97 194 aa10.19□□□□□ -0.78
SCAMP4-208ENST00000489554 EIF3FO00303 357 aaPredicted RBP10.19□□□□□ -0.78
SCAMP4-208ENST00000489554 CDC7O00311 574 aa10.19□□□□□ -0.78
SCAMP4-208ENST00000489554 BTN3A1O00481 513 aa10.19□□□□□ -0.78
SCAMP4-208ENST00000489554 ZBTB14O43829 449 aa10.19□□□□□ -0.78
SCAMP4-208ENST00000489554 MATN4O95460 622 aa10.19□□□□□ -0.78
SCAMP4-208ENST00000489554 PROCP04070 461 aa10.19□□□□□ -0.78
SCAMP4-208ENST00000489554 GSTA1P08263 222 aa10.19□□□□□ -0.78
SCAMP4-208ENST00000489554 LTA4HP09960 611 aaKnown RBP10.19□□□□□ -0.78
SCAMP4-208ENST00000489554 CBSLP0DN79 551 aa10.19□□□□□ -0.78
SCAMP4-208ENST00000489554 COL6A2P12110 1019 aa10.19□□□□□ -0.78
SCAMP4-208ENST00000489554 CDH3P22223 829 aa10.19□□□□□ -0.78
SCAMP4-208ENST00000489554 ACADLP28330 430 aa10.19□□□□□ -0.78
SCAMP4-208ENST00000489554 PRDX3P30048 256 aaKnown RBP10.19□□□□□ -0.78
SCAMP4-208ENST00000489554 SHMT2P34897 504 aa10.19□□□□□ -0.78
SCAMP4-208ENST00000489554 RPA3P35244 121 aaPredicted RBP10.19□□□□□ -0.78
SCAMP4-208ENST00000489554 CBSP35520 551 aa10.19□□□□□ -0.78
SCAMP4-208ENST00000489554 SLC18A1P54219 525 aa10.19□□□□□ -0.78
SCAMP4-208ENST00000489554 SLC12A2P55011 1212 aa10.19□□□□□ -0.78
SCAMP4-208ENST00000489554 HSPA14Q0VDF9 509 aa10.19□□□□□ -0.78
SCAMP4-208ENST00000489554 PRKG2Q13237 762 aa10.19□□□□□ -0.78
SCAMP4-208ENST00000489554 CSHL1Q14406 222 aa10.19□□□□□ -0.78
SCAMP4-208ENST00000489554 OR4D1Q15615 310 aa10.19□□□□□ -0.78
SCAMP4-208ENST00000489554 PPP1R3AQ16821 1122 aa10.19□□□□□ -0.78
SCAMP4-208ENST00000489554 TECRLQ5HYJ1 363 aa10.19□□□□□ -0.78
SCAMP4-208ENST00000489554 PWWP2BQ6NUJ5 590 aa10.19□□□□□ -0.78
SCAMP4-208ENST00000489554 UGT3A1Q6NUS8 523 aa10.19□□□□□ -0.78
SCAMP4-208ENST00000489554 C16orf46Q6P387 395 aa10.19□□□□□ -0.78
SCAMP4-208ENST00000489554 BORAQ6PGQ7 559 aa10.19□□□□□ -0.78
SCAMP4-208ENST00000489554 RAPH1Q70E73 1250 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms