RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 UBE2E3Q969T4 207 aa9.68□□□□□ -0.86
USP11-211ENST00000489111 PRR11Q96HE9 360 aaPredicted RBP9.68□□□□□ -0.86
USP11-211ENST00000489111 PPP3R2Q96LZ3 170 aa9.68□□□□□ -0.86
USP11-211ENST00000489111 C3orf30Q96M34 536 aa9.68□□□□□ -0.86
USP11-211ENST00000489111 HBEGFQ99075 208 aa9.68□□□□□ -0.86
USP11-211ENST00000489111 MENTQ9BUN1 341 aa9.68□□□□□ -0.86
USP11-211ENST00000489111 SRMSQ9H3Y6 488 aa9.68□□□□□ -0.86
USP11-211ENST00000489111 PELI2Q9HAT8 420 aa9.68□□□□□ -0.86
USP11-211ENST00000489111 OR6C2Q9NZP2 312 aa9.68□□□□□ -0.86
USP11-211ENST00000489111 ZNF624Q9P2J8 865 aaPredicted RBP9.68□□□□□ -0.86
USP11-211ENST00000489111 CPNE7Q9UBL6 633 aa9.68□□□□□ -0.86
USP11-211ENST00000489111 PCDHB11Q9Y5F2 797 aa9.68□□□□□ -0.86
USP11-211ENST00000489111 PCDHGA11Q9Y5H2 935 aa9.68□□□□□ -0.86
USP11-211ENST00000489111 PRAMEF33A0A0G2JMD5 474 aa9.67□□□□□ -0.86
USP11-211ENST00000489111 A0A1B0GVT2 93 aa9.67□□□□□ -0.86
USP11-211ENST00000489111 PIPSLA2A3N6 862 aa9.67□□□□□ -0.86
USP11-211ENST00000489111 H0YIV9 168 aa9.67□□□□□ -0.86
USP11-211ENST00000489111 AQP9O43315 295 aa9.67□□□□□ -0.86
USP11-211ENST00000489111 HNRNPCL1O60812 293 aaKnown RBP9.67□□□□□ -0.86
USP11-211ENST00000489111 ATP5HO75947 161 aa9.67□□□□□ -0.86
USP11-211ENST00000489111 WFS1O76024 890 aa9.67□□□□□ -0.86
USP11-211ENST00000489111 PDYNP01213 254 aa9.67□□□□□ -0.86
USP11-211ENST00000489111 ANXA6P08133 673 aa9.67□□□□□ -0.86
USP11-211ENST00000489111 C1GALT1C1LP0DN25 315 aa9.67□□□□□ -0.86
USP11-211ENST00000489111 ESRRAP11474 423 aaPredicted RBP9.67□□□□□ -0.86
USP11-211ENST00000489111 IDO1P14902 403 aa9.67□□□□□ -0.86
USP11-211ENST00000489111 XRCC1P18887 633 aaPredicted RBP9.67□□□□□ -0.86
USP11-211ENST00000489111 SLC19A1P41440 591 aa9.67□□□□□ -0.86
USP11-211ENST00000489111 CASP2P42575 452 aa9.67□□□□□ -0.86
USP11-211ENST00000489111 CCR8P51685 355 aa9.67□□□□□ -0.86
USP11-211ENST00000489111 ERVK-8P63133 956 aa9.67□□□□□ -0.86
USP11-211ENST00000489111 UBE2IP63279 158 aaKnown RBP9.67□□□□□ -0.86
USP11-211ENST00000489111 IRX1P78414 480 aaPredicted RBP9.67□□□□□ -0.86
USP11-211ENST00000489111 ZNF33BQ06732 778 aa9.67□□□□□ -0.86
USP11-211ENST00000489111 BNIP1Q12981 228 aa9.67□□□□□ -0.86
USP11-211ENST00000489111 CSTF3Q12996 717 aaKnown RBP9.67□□□□□ -0.86
USP11-211ENST00000489111 DDX39BQ13838 428 aaKnown RBP9.67□□□□□ -0.86
USP11-211ENST00000489111 RPS6KA2Q15349 733 aa9.67□□□□□ -0.86
USP11-211ENST00000489111 PLK5Q496M5 336 aa9.67□□□□□ -0.86
USP11-211ENST00000489111 LACTB2Q53H82 288 aaPredicted RBP9.67□□□□□ -0.86
USP11-211ENST00000489111 ICE2Q659A1 982 aa9.67□□□□□ -0.86
USP11-211ENST00000489111 OGFOD2Q6N063 350 aa9.67□□□□□ -0.86
USP11-211ENST00000489111 MED27Q6P2C8 311 aa9.67□□□□□ -0.86
USP11-211ENST00000489111 LARP4Q71RC2 724 aaKnown RBP eCLIP9.67□□□□□ -0.86
USP11-211ENST00000489111 ADCK2Q7Z695 626 aa9.67□□□□□ -0.86
USP11-211ENST00000489111 SLC9B2Q86UD5 537 aa9.67□□□□□ -0.86
USP11-211ENST00000489111 RBM12BQ8IXT5 1001 aaKnown RBP9.67□□□□□ -0.86
USP11-211ENST00000489111 MAML2Q8IZL2 1156 aaPredicted RBP9.67□□□□□ -0.86
USP11-211ENST00000489111 CPSF7Q8N684 471 aaKnown RBP9.67□□□□□ -0.86
USP11-211ENST00000489111 LINC01555Q8NAE3 123 aa9.67□□□□□ -0.86
USP11-211ENST00000489111 FNDC5Q8NAU1 212 aa9.67□□□□□ -0.86
USP11-211ENST00000489111 ZDHHC1Q8WTX9 485 aa9.67□□□□□ -0.86
USP11-211ENST00000489111 ZFPM2Q8WW38 1151 aa9.67□□□□□ -0.86
USP11-211ENST00000489111 JPH3Q8WXH2 748 aaPredicted RBP9.67□□□□□ -0.86
USP11-211ENST00000489111 USP7Q93009 1102 aa9.67□□□□□ -0.86
USP11-211ENST00000489111 SLC22A18Q96BI1 424 aa9.67□□□□□ -0.86
USP11-211ENST00000489111 MTFMTQ96DP5 389 aaKnown RBP9.67□□□□□ -0.86
USP11-211ENST00000489111 CMTM5Q96DZ9 223 aa9.67□□□□□ -0.86
USP11-211ENST00000489111 WDR34Q96EX3 536 aa9.67□□□□□ -0.86
USP11-211ENST00000489111 AIF1LQ9BQI0 150 aa9.67□□□□□ -0.86
USP11-211ENST00000489111 ACTR5Q9H9F9 607 aaPredicted RBP9.67□□□□□ -0.86
USP11-211ENST00000489111 FARSBQ9NSD9 589 aaKnown RBP9.67□□□□□ -0.86
USP11-211ENST00000489111 GIMAP2Q9UG22 337 aa9.67□□□□□ -0.86
USP11-211ENST00000489111 SLC12A4Q9UP95 1085 aa9.67□□□□□ -0.86
USP11-211ENST00000489111 SH2B3Q9UQQ2 575 aa9.67□□□□□ -0.86
USP11-211ENST00000489111 COPG1Q9Y678 874 aaKnown RBP9.67□□□□□ -0.86
USP11-211ENST00000489111 A0A1W2PPV9 198 aa9.66□□□□□ -0.86
USP11-211ENST00000489111 CAPN14A8MX76 684 aa9.66□□□□□ -0.86
USP11-211ENST00000489111 LMO7DNF2Z398 122 aa9.66□□□□□ -0.86
USP11-211ENST00000489111 PRAMEF4O60810 478 aa9.66□□□□□ -0.86
USP11-211ENST00000489111 SDC3O75056 442 aa9.66□□□□□ -0.86
USP11-211ENST00000489111 RSL1D1O76021 490 aaKnown RBP9.66□□□□□ -0.86
USP11-211ENST00000489111 UNC5CO95185 931 aa9.66□□□□□ -0.86
USP11-211ENST00000489111 CBX6O95503 412 aa9.66□□□□□ -0.86
USP11-211ENST00000489111 CHRM5P08912 532 aaPredicted RBP9.66□□□□□ -0.86
USP11-211ENST00000489111 HSD3B1P14060 373 aa9.66□□□□□ -0.86
USP11-211ENST00000489111 CD22P20273 847 aa9.66□□□□□ -0.86
USP11-211ENST00000489111 CALB2P22676 271 aa9.66□□□□□ -0.86
USP11-211ENST00000489111 CXCR2P25025 360 aa9.66□□□□□ -0.86
USP11-211ENST00000489111 HSD3B2P26439 372 aa9.66□□□□□ -0.86
USP11-211ENST00000489111 PIK3R1P27986 724 aa9.66□□□□□ -0.86
USP11-211ENST00000489111 PSMB5P28074 263 aa9.66□□□□□ -0.86
USP11-211ENST00000489111 CMPK1P30085 196 aa9.66□□□□□ -0.86
USP11-211ENST00000489111 ADSLP30566 484 aaPredicted RBP9.66□□□□□ -0.86
USP11-211ENST00000489111 CNR2P34972 360 aa9.66□□□□□ -0.86
USP11-211ENST00000489111 DPP6P42658 865 aa9.66□□□□□ -0.86
USP11-211ENST00000489111 ARRB1P49407 418 aaPredicted RBP9.66□□□□□ -0.86
USP11-211ENST00000489111 RASSF2P50749 326 aa9.66□□□□□ -0.86
USP11-211ENST00000489111 ATP4BP51164 291 aa9.66□□□□□ -0.86
USP11-211ENST00000489111 MNAT1P51948 309 aa9.66□□□□□ -0.86
USP11-211ENST00000489111 NEK2P51955 445 aa9.66□□□□□ -0.86
USP11-211ENST00000489111 HNRNPH2P55795 449 aaKnown RBP9.66□□□□□ -0.86
USP11-211ENST00000489111 RPL38P63173 70 aaKnown RBP9.66□□□□□ -0.86
USP11-211ENST00000489111 ABATP80404 500 aa9.66□□□□□ -0.86
USP11-211ENST00000489111 HMGCS1Q01581 520 aa9.66□□□□□ -0.86
USP11-211ENST00000489111 HHEXQ03014 270 aa9.66□□□□□ -0.86
USP11-211ENST00000489111 KLF10Q13118 480 aa9.66□□□□□ -0.86
USP11-211ENST00000489111 MAD2L1Q13257 205 aaPredicted RBP9.66□□□□□ -0.86
USP11-211ENST00000489111 GPR18Q14330 331 aa9.66□□□□□ -0.86
USP11-211ENST00000489111 MAPRE2Q15555 327 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms