RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 UBR5O95071 2799 aaPredicted RBP23.94■■□□□ 1.42
HMGN1-217ENST00000489072 OR2A25A4D2G3 310 aa23.93■■□□□ 1.42
HMGN1-217ENST00000489072 SMAPO00193 183 aa23.93■■□□□ 1.42
HMGN1-217ENST00000489072 PDGFAP04085 211 aa23.93■■□□□ 1.42
HMGN1-217ENST00000489072 ALAS2P22557 587 aa23.93■■□□□ 1.42
HMGN1-217ENST00000489072 CMPK1P30085 196 aa23.93■■□□□ 1.42
HMGN1-217ENST00000489072 RPA3P35244 121 aaPredicted RBP23.93■■□□□ 1.42
HMGN1-217ENST00000489072 CDKN2DP55273 166 aa23.93■■□□□ 1.42
HMGN1-217ENST00000489072 VSX2P58304 361 aaPredicted RBP23.93■■□□□ 1.42
HMGN1-217ENST00000489072 TSTA3Q13630 321 aaPredicted RBP23.93■■□□□ 1.42
HMGN1-217ENST00000489072 HIF1AQ16665 826 aa23.93■■□□□ 1.42
HMGN1-217ENST00000489072 TCTE1Q5JU00 501 aa23.93■■□□□ 1.42
HMGN1-217ENST00000489072 TEDDM1Q5T9Z0 273 aa23.93■■□□□ 1.42
HMGN1-217ENST00000489072 STEAP4Q687X5 459 aa23.93■■□□□ 1.42
HMGN1-217ENST00000489072 MRPL14Q6P1L8 145 aaKnown RBP23.93■■□□□ 1.42
HMGN1-217ENST00000489072 KIAA0408Q6ZU52 694 aa23.93■■□□□ 1.42
HMGN1-217ENST00000489072 RNF44Q7L0R7 432 aa23.93■■□□□ 1.42
HMGN1-217ENST00000489072 CUTCQ9NTM9 273 aa23.93■■□□□ 1.42
HMGN1-217ENST00000489072 TRMT6Q9UJA5 497 aaKnown RBP23.93■■□□□ 1.42
HMGN1-217ENST00000489072 LOC105369274A0A096LPK9 316 aa23.92■■□□□ 1.42
HMGN1-217ENST00000489072 IGKV1-8A0A0C4DH67 115 aa23.92■■□□□ 1.42
HMGN1-217ENST00000489072 LOC102723532A0A0G2JNH3 316 aa23.92■■□□□ 1.42
HMGN1-217ENST00000489072 A0A0J9YVX5 310 aa23.92■■□□□ 1.42
HMGN1-217ENST00000489072 A0A1B0GX78 115 aa23.92■■□□□ 1.42
HMGN1-217ENST00000489072 FITM1A5D6W6 292 aa23.92■■□□□ 1.42
HMGN1-217ENST00000489072 E7ENX8 843 aa23.92■■□□□ 1.42
HMGN1-217ENST00000489072 EIF3FO00303 357 aaPredicted RBP23.92■■□□□ 1.42
HMGN1-217ENST00000489072 ZIC2O95409 532 aaPredicted RBP23.92■■□□□ 1.42
HMGN1-217ENST00000489072 SYF2O95926 243 aaKnown RBP23.92■■□□□ 1.42
HMGN1-217ENST00000489072 HSD17B2P37059 387 aa23.92■■□□□ 1.42
HMGN1-217ENST00000489072 SKIV2L2P42285 1042 aaKnown RBP23.92■■□□□ 1.42
HMGN1-217ENST00000489072 ARSFP54793 590 aa23.92■■□□□ 1.42
HMGN1-217ENST00000489072 MRPS25P82663 173 aaKnown RBP23.92■■□□□ 1.42
HMGN1-217ENST00000489072 TAP2Q03519 686 aa23.92■■□□□ 1.42
HMGN1-217ENST00000489072 ATP1A4Q13733 1029 aa23.92■■□□□ 1.42
HMGN1-217ENST00000489072 GRM7Q14831 915 aa23.92■■□□□ 1.42
HMGN1-217ENST00000489072 COLEC12Q5KU26 742 aa23.92■■□□□ 1.42
HMGN1-217ENST00000489072 WASHC2DQ5SRD0 308 aa23.92■■□□□ 1.42
HMGN1-217ENST00000489072 UBE2R2Q712K3 238 aaPredicted RBP23.92■■□□□ 1.42
HMGN1-217ENST00000489072 LRRC56Q8IYG6 542 aaPredicted RBP23.92■■□□□ 1.42
HMGN1-217ENST00000489072 OR4N4Q8N0Y3 316 aa23.92■■□□□ 1.42
HMGN1-217ENST00000489072 DTWD1Q8N5C7 304 aa23.92■■□□□ 1.42
HMGN1-217ENST00000489072 GABPB2Q8TAK5 448 aaPredicted RBP23.92■■□□□ 1.42
HMGN1-217ENST00000489072 EEF1AKMT1Q8WVE0 214 aa23.92■■□□□ 1.42
HMGN1-217ENST00000489072 LRRC39Q96DD0 335 aa23.92■■□□□ 1.42
HMGN1-217ENST00000489072 SYNPO2LQ9H987 977 aa23.92■■□□□ 1.42
HMGN1-217ENST00000489072 MRPS30Q9NP92 439 aaKnown RBP23.92■■□□□ 1.42
HMGN1-217ENST00000489072 ACSS2Q9NR19 701 aa23.92■■□□□ 1.42
HMGN1-217ENST00000489072 NDOR1Q9UHB4 597 aa23.92■■□□□ 1.42
HMGN1-217ENST00000489072 TAC3Q9UHF0 121 aa23.92■■□□□ 1.42
HMGN1-217ENST00000489072 PTRH2Q9Y3E5 179 aaKnown RBP23.92■■□□□ 1.42
HMGN1-217ENST00000489072 SPENQ96T58 3664 aaKnown RBP23.92■■□□□ 1.42
HMGN1-217ENST00000489072 EFCAB8A8MWE9 144 aa23.91■■□□□ 1.42
HMGN1-217ENST00000489072 DSCR3O14972 297 aa23.91■■□□□ 1.42
HMGN1-217ENST00000489072 SRPX2O60687 465 aaPredicted RBP23.91■■□□□ 1.42
HMGN1-217ENST00000489072 MED26O95402 600 aa23.91■■□□□ 1.42
HMGN1-217ENST00000489072 OTX2P32243 289 aa23.91■■□□□ 1.42
HMGN1-217ENST00000489072 RPL21P46778 160 aaKnown RBP23.91■■□□□ 1.42
HMGN1-217ENST00000489072 CCL11P51671 97 aa23.91■■□□□ 1.42
HMGN1-217ENST00000489072 ARL4CP56559 192 aa23.91■■□□□ 1.42
HMGN1-217ENST00000489072 FBXO42Q6P3S6 717 aa23.91■■□□□ 1.42
HMGN1-217ENST00000489072 PAQR3Q6TCH7 311 aa23.91■■□□□ 1.42
HMGN1-217ENST00000489072 GALNT7Q86SF2 657 aa23.91■■□□□ 1.42
HMGN1-217ENST00000489072 ANKMY2Q8IV38 441 aa23.91■■□□□ 1.42
HMGN1-217ENST00000489072 TTC29Q8NA56 475 aaPredicted RBP23.91■■□□□ 1.42
HMGN1-217ENST00000489072 ZDHHC19Q8WVZ1 309 aaPredicted RBP23.91■■□□□ 1.42
HMGN1-217ENST00000489072 PLCD4Q9BRC7 762 aa23.91■■□□□ 1.42
HMGN1-217ENST00000489072 EPN3Q9H201 632 aa23.91■■□□□ 1.42
HMGN1-217ENST00000489072 PPANQ9NQ55 473 aaKnown RBP23.91■■□□□ 1.42
HMGN1-217ENST00000489072 TAS2R13Q9NYV9 303 aa23.91■■□□□ 1.42
HMGN1-217ENST00000489072 ADAMTS6Q9UKP5 1117 aa23.91■■□□□ 1.42
HMGN1-217ENST00000489072 SNX24Q9Y343 169 aa23.91■■□□□ 1.42
HMGN1-217ENST00000489072 ZNF839A8K0R7 811 aa23.9■■□□□ 1.42
HMGN1-217ENST00000489072 ZBTB14O43829 449 aa23.9■■□□□ 1.42
HMGN1-217ENST00000489072 ONECUT2O95948 504 aa23.9■■□□□ 1.42
HMGN1-217ENST00000489072 IMPA1P29218 277 aa23.9■■□□□ 1.42
HMGN1-217ENST00000489072 FOLR3P41439 243 aa23.9■■□□□ 1.42
HMGN1-217ENST00000489072 PGGT1BP53609 377 aa23.9■■□□□ 1.42
HMGN1-217ENST00000489072 PRDX1Q06830 199 aaKnown RBP23.9■■□□□ 1.42
HMGN1-217ENST00000489072 FASTKD3Q14CZ7 662 aaKnown RBP23.9■■□□□ 1.42
HMGN1-217ENST00000489072 YOD1Q5VVQ6 348 aaPredicted RBP23.9■■□□□ 1.42
HMGN1-217ENST00000489072 ICE2Q659A1 982 aa23.9■■□□□ 1.42
HMGN1-217ENST00000489072 UGT3A1Q6NUS8 523 aa23.9■■□□□ 1.42
HMGN1-217ENST00000489072 ASB18Q6ZVZ8 466 aa23.9■■□□□ 1.42
HMGN1-217ENST00000489072 COX15Q7KZN9 410 aa23.9■■□□□ 1.42
HMGN1-217ENST00000489072 MRGPREQ86SM8 312 aa23.9■■□□□ 1.42
HMGN1-217ENST00000489072 PAQR7Q86WK9 346 aa23.9■■□□□ 1.42
HMGN1-217ENST00000489072 RAB43Q86YS6 212 aa23.9■■□□□ 1.42
HMGN1-217ENST00000489072 OR2Y1Q8NGV0 311 aa23.9■■□□□ 1.42
HMGN1-217ENST00000489072 ZFYVE21Q9BQ24 234 aa23.9■■□□□ 1.42
HMGN1-217ENST00000489072 ANAPC2Q9UJX6 822 aa23.9■■□□□ 1.42
HMGN1-217ENST00000489072 FLNBO75369 2602 aaKnown RBP23.89■■□□□ 1.42
HMGN1-217ENST00000489072 FLNCQ14315 2725 aa23.89■■□□□ 1.42
HMGN1-217ENST00000489072 UMODP07911 640 aa23.89■■□□□ 1.41
HMGN1-217ENST00000489072 CASRP41180 1078 aa23.89■■□□□ 1.41
HMGN1-217ENST00000489072 TLE1Q04724 770 aa23.89■■□□□ 1.41
HMGN1-217ENST00000489072 SSPNQ14714 243 aa23.89■■□□□ 1.41
HMGN1-217ENST00000489072 NAA25Q14CX7 972 aa23.89■■□□□ 1.41
HMGN1-217ENST00000489072 ZNF425Q6IV72 752 aa23.89■■□□□ 1.41
HMGN1-217ENST00000489072 METTL27Q8N6F8 245 aaPredicted RBP23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms