RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 CCDC177Q9NQR7 707 aaPredicted RBP8.76□□□□□ -1.01
HDAC6-232ENST00000489053 CUTCQ9NTM9 273 aa8.76□□□□□ -1.01
HDAC6-232ENST00000489053 NSMCE4AQ9NXX6 385 aa8.76□□□□□ -1.01
HDAC6-232ENST00000489053 ANKMY1Q9P2S6 941 aa8.76□□□□□ -1.01
HDAC6-232ENST00000489053 TAC3Q9UHF0 121 aa8.76□□□□□ -1.01
HDAC6-232ENST00000489053 CDC23Q9UJX2 597 aa8.76□□□□□ -1.01
HDAC6-232ENST00000489053 ANAPC2Q9UJX6 822 aa8.76□□□□□ -1.01
HDAC6-232ENST00000489053 TLK1Q9UKI8 766 aa8.76□□□□□ -1.01
HDAC6-232ENST00000489053 DHRS7Q9Y394 339 aa8.76□□□□□ -1.01
HDAC6-232ENST00000489053 UTP11Q9Y3A2 253 aaKnown RBP8.76□□□□□ -1.01
HDAC6-232ENST00000489053 KRT87PA6NCN2 255 aa8.75□□□□□ -1.01
HDAC6-232ENST00000489053 A6NL46 340 aa8.75□□□□□ -1.01
HDAC6-232ENST00000489053 MYO1CO00159 1063 aa8.75□□□□□ -1.01
HDAC6-232ENST00000489053 TXNDC9O14530 226 aa8.75□□□□□ -1.01
HDAC6-232ENST00000489053 DSCR3O14972 297 aa8.75□□□□□ -1.01
HDAC6-232ENST00000489053 SEC31AO94979 1220 aaKnown RBP8.75□□□□□ -1.01
HDAC6-232ENST00000489053 SLC16A8O95907 504 aa8.75□□□□□ -1.01
HDAC6-232ENST00000489053 ANXA5P08758 320 aa8.75□□□□□ -1.01
HDAC6-232ENST00000489053 GRK3P35626 688 aa8.75□□□□□ -1.01
HDAC6-232ENST00000489053 PTGIRP43119 386 aa8.75□□□□□ -1.01
HDAC6-232ENST00000489053 IL2P60568 153 aa8.75□□□□□ -1.01
HDAC6-232ENST00000489053 KCNC4Q03721 635 aa8.75□□□□□ -1.01
HDAC6-232ENST00000489053 CHAF1BQ13112 559 aa8.75□□□□□ -1.01
HDAC6-232ENST00000489053 SP140Q13342 867 aa8.75□□□□□ -1.01
HDAC6-232ENST00000489053 ATP1A4Q13733 1029 aa8.75□□□□□ -1.01
HDAC6-232ENST00000489053 GRB7Q14451 532 aa8.75□□□□□ -1.01
HDAC6-232ENST00000489053 MUM1Q2TAK8 710 aa8.75□□□□□ -1.01
HDAC6-232ENST00000489053 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.75□□□□□ -1.01
HDAC6-232ENST00000489053 WASHC2DQ5SRD0 308 aa8.75□□□□□ -1.01
HDAC6-232ENST00000489053 ICE2Q659A1 982 aa8.75□□□□□ -1.01
HDAC6-232ENST00000489053 TCTN3Q6NUS6 607 aa8.75□□□□□ -1.01
HDAC6-232ENST00000489053 MED25Q71SY5 747 aa8.75□□□□□ -1.01
HDAC6-232ENST00000489053 PIWIL4Q7Z3Z4 852 aaKnown RBP8.75□□□□□ -1.01
HDAC6-232ENST00000489053 ANKMY2Q8IV38 441 aa8.75□□□□□ -1.01
HDAC6-232ENST00000489053 APLFQ8IW19 511 aaPredicted RBP8.75□□□□□ -1.01
HDAC6-232ENST00000489053 ZBED8Q8IZ13 594 aa8.75□□□□□ -1.01
HDAC6-232ENST00000489053 TBC1D19Q8N5T2 526 aa8.75□□□□□ -1.01
HDAC6-232ENST00000489053 METTL27Q8N6F8 245 aaPredicted RBP8.75□□□□□ -1.01
HDAC6-232ENST00000489053 EFCAB3Q8N7B9 438 aa8.75□□□□□ -1.01
HDAC6-232ENST00000489053 FLVCR1-AS1Q8TAF5 88 aa8.75□□□□□ -1.01
HDAC6-232ENST00000489053 CD200R1Q8TD46 325 aa8.75□□□□□ -1.01
HDAC6-232ENST00000489053 CDKL2Q92772 493 aa8.75□□□□□ -1.01
HDAC6-232ENST00000489053 PTERQ96BW5 349 aa8.75□□□□□ -1.01
HDAC6-232ENST00000489053 LINGO1Q96FE5 620 aa8.75□□□□□ -1.01
HDAC6-232ENST00000489053 CCDC138Q96M89 665 aa8.75□□□□□ -1.01
HDAC6-232ENST00000489053 GBP5Q96PP8 586 aa8.75□□□□□ -1.01
HDAC6-232ENST00000489053 TRIM4Q9C037 500 aa8.75□□□□□ -1.01
HDAC6-232ENST00000489053 PCBD2Q9H0N5 130 aa8.75□□□□□ -1.01
HDAC6-232ENST00000489053 DPH5Q9H2P9 285 aa8.75□□□□□ -1.01
HDAC6-232ENST00000489053 MAP10Q9P2G4 905 aa8.75□□□□□ -1.01
HDAC6-232ENST00000489053 GALPQ9UBC7 116 aa8.75□□□□□ -1.01
HDAC6-232ENST00000489053 NXT1Q9UKK6 140 aaKnown RBP8.75□□□□□ -1.01
HDAC6-232ENST00000489053 CORO1CQ9ULV4 474 aaPredicted RBP8.75□□□□□ -1.01
HDAC6-232ENST00000489053 CDC14AQ9UNH5 594 aa8.75□□□□□ -1.01
HDAC6-232ENST00000489053 TP53TG5Q9Y2B4 290 aa8.75□□□□□ -1.01
HDAC6-232ENST00000489053 SNX24Q9Y343 169 aa8.75□□□□□ -1.01
HDAC6-232ENST00000489053 ZNF451Q9Y4E5 1061 aa8.75□□□□□ -1.01
HDAC6-232ENST00000489053 HYKKA2RU49 373 aa8.74□□□□□ -1.01
HDAC6-232ENST00000489053 FAM187AA6NFU0 413 aa8.74□□□□□ -1.01
HDAC6-232ENST00000489053 SLC16A5O15375 505 aa8.74□□□□□ -1.01
HDAC6-232ENST00000489053 DNAJB5O75953 348 aa8.74□□□□□ -1.01
HDAC6-232ENST00000489053 FURINP09958 794 aa8.74□□□□□ -1.01
HDAC6-232ENST00000489053 EZRP15311 586 aaKnown RBP8.74□□□□□ -1.01
HDAC6-232ENST00000489053 FBLP22087 321 aaKnown RBP8.74□□□□□ -1.01
HDAC6-232ENST00000489053 CCND1P24385 295 aa8.74□□□□□ -1.01
HDAC6-232ENST00000489053 HRH2P25021 359 aa8.74□□□□□ -1.01
HDAC6-232ENST00000489053 TLE1Q04724 770 aa8.74□□□□□ -1.01
HDAC6-232ENST00000489053 CKAP4Q07065 602 aaKnown RBP8.74□□□□□ -1.01
HDAC6-232ENST00000489053 MGAT5Q09328 741 aa8.74□□□□□ -1.01
HDAC6-232ENST00000489053 ILF2Q12905 390 aaKnown RBP8.74□□□□□ -1.01
HDAC6-232ENST00000489053 FASTKQ14296 549 aaKnown RBP8.74□□□□□ -1.01
HDAC6-232ENST00000489053 GBX1Q14549 363 aa8.74□□□□□ -1.01
HDAC6-232ENST00000489053 SSPNQ14714 243 aa8.74□□□□□ -1.01
HDAC6-232ENST00000489053 RBBP7Q16576 425 aa8.74□□□□□ -1.01
HDAC6-232ENST00000489053 NDUFA9Q16795 377 aa8.74□□□□□ -1.01
HDAC6-232ENST00000489053 MSS51Q4VC12 460 aa8.74□□□□□ -1.01
HDAC6-232ENST00000489053 FAM69BQ5VUD6 431 aa8.74□□□□□ -1.01
HDAC6-232ENST00000489053 CPZQ66K79 652 aa8.74□□□□□ -1.01
HDAC6-232ENST00000489053 FCRL6Q6DN72 434 aa8.74□□□□□ -1.01
HDAC6-232ENST00000489053 LCN10Q6JVE6 187 aa8.74□□□□□ -1.01
HDAC6-232ENST00000489053 FAM45BPQ6NSW5 357 aa8.74□□□□□ -1.01
HDAC6-232ENST00000489053 HIBCHQ6NVY1 386 aaPredicted RBP8.74□□□□□ -1.01
HDAC6-232ENST00000489053 PRMT9Q6P2P2 845 aa8.74□□□□□ -1.01
HDAC6-232ENST00000489053 ZNF549Q6P9A3 640 aa8.74□□□□□ -1.01
HDAC6-232ENST00000489053 ZNF517Q6ZMY9 492 aaPredicted RBP8.74□□□□□ -1.01
HDAC6-232ENST00000489053 CAPN12Q6ZSI9 719 aa8.74□□□□□ -1.01
HDAC6-232ENST00000489053 FRA10AC1Q70Z53 315 aa8.74□□□□□ -1.01
HDAC6-232ENST00000489053 STRA8Q7Z7C7 330 aa8.74□□□□□ -1.01
HDAC6-232ENST00000489053 MRGPREQ86SM8 312 aa8.74□□□□□ -1.01
HDAC6-232ENST00000489053 ATCAYQ86WG3 371 aa8.74□□□□□ -1.01
HDAC6-232ENST00000489053 CCDC25Q86WR0 208 aa8.74□□□□□ -1.01
HDAC6-232ENST00000489053 CSNK1A1LQ8N752 337 aa8.74□□□□□ -1.01
HDAC6-232ENST00000489053 FBXO15Q8NCQ5 510 aaPredicted RBP8.74□□□□□ -1.01
HDAC6-232ENST00000489053 PPFIBP2Q8ND30 876 aa8.74□□□□□ -1.01
HDAC6-232ENST00000489053 FBXO36Q8NEA4 188 aa8.74□□□□□ -1.01
HDAC6-232ENST00000489053 OR2A1Q8NGT9 310 aa8.74□□□□□ -1.01
HDAC6-232ENST00000489053 OR2Y1Q8NGV0 311 aa8.74□□□□□ -1.01
HDAC6-232ENST00000489053 GIMAP7Q8NHV1 300 aa8.74□□□□□ -1.01
HDAC6-232ENST00000489053 FAM45AQ8TCE6 357 aa8.74□□□□□ -1.01
HDAC6-232ENST00000489053 PYROXD1Q8WU10 500 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms