RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 SPDYE7PQ495Y7 208 aa3.25□□□□□ -1.89
PRPF4-203ENST00000488937 TDRD12Q587J7 1177 aaKnown RBP3.25□□□□□ -1.89
PRPF4-203ENST00000488937 PRAMEF19Q5SWL8 479 aa3.25□□□□□ -1.89
PRPF4-203ENST00000488937 ANXA8L1Q5VT79 327 aa3.25□□□□□ -1.89
PRPF4-203ENST00000488937 SUSD4Q5VX71 490 aa3.25□□□□□ -1.89
PRPF4-203ENST00000488937 ANKRD54Q6NXT1 300 aa3.25□□□□□ -1.89
PRPF4-203ENST00000488937 ATG9AQ7Z3C6 839 aa3.25□□□□□ -1.89
PRPF4-203ENST00000488937 WDR53Q7Z5U6 358 aaPredicted RBP3.25□□□□□ -1.89
PRPF4-203ENST00000488937 TFAP2DQ7Z6R9 452 aa3.25□□□□□ -1.89
PRPF4-203ENST00000488937 ZC3HC1Q86WB0 502 aaKnown RBP3.25□□□□□ -1.89
PRPF4-203ENST00000488937 LNX2Q8N448 690 aa3.25□□□□□ -1.89
PRPF4-203ENST00000488937 CERS5Q8N5B7 392 aa3.25□□□□□ -1.89
PRPF4-203ENST00000488937 PARP16Q8N5Y8 322 aa3.25□□□□□ -1.89
PRPF4-203ENST00000488937 GBP7Q8N8V2 638 aaPredicted RBP3.25□□□□□ -1.89
PRPF4-203ENST00000488937 SLC38A9Q8NBW4 561 aa3.25□□□□□ -1.89
PRPF4-203ENST00000488937 BHLHE23Q8NDY6 225 aa3.25□□□□□ -1.89
PRPF4-203ENST00000488937 STKLD1Q8NE28 680 aa3.25□□□□□ -1.89
PRPF4-203ENST00000488937 OR8J1Q8NGP2 316 aa3.25□□□□□ -1.89
PRPF4-203ENST00000488937 AKR7LQ8NHP1 331 aa3.25□□□□□ -1.89
PRPF4-203ENST00000488937 TBC1D16Q8TBP0 767 aa3.25□□□□□ -1.89
PRPF4-203ENST00000488937 RLN3Q8WXF3 142 aa3.25□□□□□ -1.89
PRPF4-203ENST00000488937 ATOH1Q92858 354 aaPredicted RBP3.25□□□□□ -1.89
PRPF4-203ENST00000488937 APBB2Q92870 758 aa3.25□□□□□ -1.89
PRPF4-203ENST00000488937 LINGO1Q96FE5 620 aa3.25□□□□□ -1.89
PRPF4-203ENST00000488937 PGBD1Q96JS3 809 aa3.25□□□□□ -1.89
PRPF4-203ENST00000488937 PBKQ96KB5 322 aa3.25□□□□□ -1.89
PRPF4-203ENST00000488937 RPGRIP1Q96KN7 1286 aa3.25□□□□□ -1.89
PRPF4-203ENST00000488937 OR6C1Q96RD1 312 aa3.25□□□□□ -1.89
PRPF4-203ENST00000488937 TAAR6Q96RI8 345 aa3.25□□□□□ -1.89
PRPF4-203ENST00000488937 TBC1D10AQ9BXI6 508 aa3.25□□□□□ -1.89
PRPF4-203ENST00000488937 ALOXE3Q9BYJ1 711 aa3.25□□□□□ -1.89
PRPF4-203ENST00000488937 TMEM39BQ9GZU3 492 aa3.25□□□□□ -1.89
PRPF4-203ENST00000488937 WWTR1Q9GZV5 400 aa3.25□□□□□ -1.89
PRPF4-203ENST00000488937 ZDHHC6Q9H6R6 413 aa3.25□□□□□ -1.89
PRPF4-203ENST00000488937 MVB12BQ9H7P6 319 aa3.25□□□□□ -1.89
PRPF4-203ENST00000488937 ROPN1Q9HAT0 212 aaPredicted RBP3.25□□□□□ -1.89
PRPF4-203ENST00000488937 UPF2Q9HAU5 1272 aaKnown RBP3.25□□□□□ -1.89
PRPF4-203ENST00000488937 ZNF304Q9HCX3 659 aa3.25□□□□□ -1.89
PRPF4-203ENST00000488937 HINT3Q9NQE9 182 aaKnown RBP3.25□□□□□ -1.89
PRPF4-203ENST00000488937 RPRD1BQ9NQG5 326 aaKnown RBP3.25□□□□□ -1.89
PRPF4-203ENST00000488937 ACSS1Q9NUB1 689 aaPredicted RBP3.25□□□□□ -1.89
PRPF4-203ENST00000488937 ZCCHC3Q9NUD5 404 aaKnown RBP3.25□□□□□ -1.89
PRPF4-203ENST00000488937 HYPKQ9NX55 129 aa3.25□□□□□ -1.89
PRPF4-203ENST00000488937 ASIC5Q9NY37 505 aa3.25□□□□□ -1.89
PRPF4-203ENST00000488937 IL20RAQ9UHF4 553 aa3.25□□□□□ -1.89
PRPF4-203ENST00000488937 PCDHA12Q9UN75 941 aa3.25□□□□□ -1.89
PRPF4-203ENST00000488937 MRPS2Q9Y399 296 aaKnown RBP3.25□□□□□ -1.89
PRPF4-203ENST00000488937 NOX1Q9Y5S8 564 aa3.25□□□□□ -1.89
PRPF4-203ENST00000488937 NPC1L1Q9UHC9 1359 aa3.25□□□□□ -1.89
PRPF4-203ENST00000488937 MAST3O60307 1309 aa3.24□□□□□ -1.89
PRPF4-203ENST00000488937 COL3A1P02461 1466 aaPredicted RBP3.24□□□□□ -1.89
PRPF4-203ENST00000488937 A0A096LPK6 155 aa3.24□□□□□ -1.89
PRPF4-203ENST00000488937 TRBV5-7A0A0A0MS05 114 aa3.24□□□□□ -1.89
PRPF4-203ENST00000488937 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.24□□□□□ -1.89
PRPF4-203ENST00000488937 A0A0U1RQV5 110 aa3.24□□□□□ -1.89
PRPF4-203ENST00000488937 A0A0U1RRA0 63 aa3.24□□□□□ -1.89
PRPF4-203ENST00000488937 SERTM2A0A1B0GWG4 89 aa3.24□□□□□ -1.89
PRPF4-203ENST00000488937 TMEM129A0AVI4 362 aa3.24□□□□□ -1.89
PRPF4-203ENST00000488937 GOLGA8OA6NCC3 632 aa3.24□□□□□ -1.89
PRPF4-203ENST00000488937 CXorf65A6NEN9 183 aa3.24□□□□□ -1.89
PRPF4-203ENST00000488937 NEMP2A6NFY4 417 aa3.24□□□□□ -1.89
PRPF4-203ENST00000488937 DDTLA6NHG4 134 aaPredicted RBP3.24□□□□□ -1.89
PRPF4-203ENST00000488937 E9PI62 339 aa3.24□□□□□ -1.89
PRPF4-203ENST00000488937 GOLGA8NF8WBI6 632 aa3.24□□□□□ -1.89
PRPF4-203ENST00000488937 M0QZ24 198 aa3.24□□□□□ -1.89
PRPF4-203ENST00000488937 CLIC1O00299 241 aa3.24□□□□□ -1.89
PRPF4-203ENST00000488937 OGTO15294 1046 aa3.24□□□□□ -1.89
PRPF4-203ENST00000488937 POLR2DO15514 142 aaKnown RBP3.24□□□□□ -1.89
PRPF4-203ENST00000488937 ADAM12O43184 909 aa3.24□□□□□ -1.89
PRPF4-203ENST00000488937 TSPAN1O60635 241 aa3.24□□□□□ -1.89
PRPF4-203ENST00000488937 B4GALT2O60909 372 aa3.24□□□□□ -1.89
PRPF4-203ENST00000488937 VPS26AO75436 327 aa3.24□□□□□ -1.89
PRPF4-203ENST00000488937 NEURL1O76050 574 aa3.24□□□□□ -1.89
PRPF4-203ENST00000488937 KDM4BO94953 1096 aa3.24□□□□□ -1.89
PRPF4-203ENST00000488937 MFN2O95140 757 aa3.24□□□□□ -1.89
PRPF4-203ENST00000488937 OR6A2O95222 327 aa3.24□□□□□ -1.89
PRPF4-203ENST00000488937 LUC7L3O95232 432 aaKnown RBP3.24□□□□□ -1.89
PRPF4-203ENST00000488937 IL1BP01584 269 aa3.24□□□□□ -1.89
PRPF4-203ENST00000488937 IGLV2-14P01704 120 aa3.24□□□□□ -1.89
PRPF4-203ENST00000488937 IGHEP01854 428 aa3.24□□□□□ -1.89
PRPF4-203ENST00000488937 CSF2P04141 144 aa3.24□□□□□ -1.89
PRPF4-203ENST00000488937 CAPN1P07384 714 aa3.24□□□□□ -1.89
PRPF4-203ENST00000488937 ASNSP08243 561 aa3.24□□□□□ -1.89
PRPF4-203ENST00000488937 DLATP10515 647 aaKnown RBP3.24□□□□□ -1.89
PRPF4-203ENST00000488937 HSPA8P11142 646 aaKnown RBP3.24□□□□□ -1.89
PRPF4-203ENST00000488937 AKR1A1P14550 325 aa3.24□□□□□ -1.89
PRPF4-203ENST00000488937 EPCAMP16422 314 aa3.24□□□□□ -1.89
PRPF4-203ENST00000488937 ZNF18P17022 549 aa3.24□□□□□ -1.89
PRPF4-203ENST00000488937 MAOAP21397 527 aa3.24□□□□□ -1.89
PRPF4-203ENST00000488937 HTR2AP28223 471 aa3.24□□□□□ -1.89
PRPF4-203ENST00000488937 PRDX6P30041 224 aa3.24□□□□□ -1.89
PRPF4-203ENST00000488937 CHRNA5P30532 468 aa3.24□□□□□ -1.89
PRPF4-203ENST00000488937 CAPGP40121 348 aa3.24□□□□□ -1.89
PRPF4-203ENST00000488937 COMPP49747 757 aaPredicted RBP3.24□□□□□ -1.89
PRPF4-203ENST00000488937 METAP2P50579 478 aaKnown RBP eCLIP3.24□□□□□ -1.89
PRPF4-203ENST00000488937 HADHBP55084 474 aaKnown RBP3.24□□□□□ -1.89
PRPF4-203ENST00000488937 PRMT2P55345 433 aa3.24□□□□□ -1.89
PRPF4-203ENST00000488937 SPAG1Q07617 926 aa3.24□□□□□ -1.89
PRPF4-203ENST00000488937 GRIK2Q13002 908 aa3.24□□□□□ -1.89
PRPF4-203ENST00000488937 GAGE2BQ13066 116 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms