RNA–Protein interactions for RNA: ENST00000488839.1

SFXN5-219, Transcript of sideroflexin 5, humanhuman

TSL 3

Gene SFXN5, Length 671 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-219ENST00000488839 RGS4P49798 205 aa11.85□□□□□ -0.51
SFXN5-219ENST00000488839 PNLIPRP1P54315 467 aa11.85□□□□□ -0.51
SFXN5-219ENST00000488839 ARL4CP56559 192 aa11.85□□□□□ -0.51
SFXN5-219ENST00000488839 PRDX1Q06830 199 aaKnown RBP11.85□□□□□ -0.51
SFXN5-219ENST00000488839 KLRB1Q12918 225 aa11.85□□□□□ -0.51
SFXN5-219ENST00000488839 PTCHD3Q3KNS1 767 aa11.85□□□□□ -0.51
SFXN5-219ENST00000488839 CCSMST1Q4G0I0 132 aa11.85□□□□□ -0.51
SFXN5-219ENST00000488839 NKAIN1Q4KMZ8 207 aa11.85□□□□□ -0.51
SFXN5-219ENST00000488839 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.85□□□□□ -0.51
SFXN5-219ENST00000488839 LCN10Q6JVE6 187 aa11.85□□□□□ -0.51
SFXN5-219ENST00000488839 PRMT9Q6P2P2 845 aa11.85□□□□□ -0.51
SFXN5-219ENST00000488839 RNF44Q7L0R7 432 aa11.85□□□□□ -0.51
SFXN5-219ENST00000488839 MAATS1Q7Z4T9 603 aa11.85□□□□□ -0.51
SFXN5-219ENST00000488839 KLHL7Q8IXQ5 586 aa11.85□□□□□ -0.51
SFXN5-219ENST00000488839 C2orf73Q8N5S3 287 aaPredicted RBP11.85□□□□□ -0.51
SFXN5-219ENST00000488839 ZNF655Q8N720 491 aaPredicted RBP11.85□□□□□ -0.51
SFXN5-219ENST00000488839 OR2Y1Q8NGV0 311 aa11.85□□□□□ -0.51
SFXN5-219ENST00000488839 CD200R1Q8TD46 325 aa11.85□□□□□ -0.51
SFXN5-219ENST00000488839 CERS2Q96G23 380 aa11.85□□□□□ -0.51
SFXN5-219ENST00000488839 SNF8Q96H20 258 aa11.85□□□□□ -0.51
SFXN5-219ENST00000488839 CAPZA3Q96KX2 299 aa11.85□□□□□ -0.51
SFXN5-219ENST00000488839 RUFY1Q96T51 708 aa11.85□□□□□ -0.51
SFXN5-219ENST00000488839 GPR21Q99679 349 aa11.85□□□□□ -0.51
SFXN5-219ENST00000488839 SELENOSQ9BQE4 189 aa11.85□□□□□ -0.51
SFXN5-219ENST00000488839 PCBD2Q9H0N5 130 aa11.85□□□□□ -0.51
SFXN5-219ENST00000488839 ING2Q9H160 280 aa11.85□□□□□ -0.51
SFXN5-219ENST00000488839 SLC26A1Q9H2B4 701 aa11.85□□□□□ -0.51
SFXN5-219ENST00000488839 WDR54Q9H977 334 aa11.85□□□□□ -0.51
SFXN5-219ENST00000488839 MLXIPLQ9NP71 852 aa11.85□□□□□ -0.51
SFXN5-219ENST00000488839 ACSS2Q9NR19 701 aa11.85□□□□□ -0.51
SFXN5-219ENST00000488839 IRAK4Q9NWZ3 460 aa11.85□□□□□ -0.51
SFXN5-219ENST00000488839 IFT80Q9P2H3 777 aaPredicted RBP11.85□□□□□ -0.51
SFXN5-219ENST00000488839 TRMT6Q9UJA5 497 aaKnown RBP11.85□□□□□ -0.51
SFXN5-219ENST00000488839 TLK1Q9UKI8 766 aa11.85□□□□□ -0.51
SFXN5-219ENST00000488839 TEX264Q9Y6I9 313 aa11.85□□□□□ -0.51
SFXN5-219ENST00000488839 SEC16AO15027 2179 aa11.85□□□□□ -0.51
SFXN5-219ENST00000488839 HELZ2Q9BYK8 2649 aaKnown RBP11.85□□□□□ -0.51
SFXN5-219ENST00000488839 SPTA1P02549 2419 aa11.85□□□□□ -0.51
SFXN5-219ENST00000488839 OR2A25A4D2G3 310 aa11.84□□□□□ -0.51
SFXN5-219ENST00000488839 E7ENX8 843 aa11.84□□□□□ -0.51
SFXN5-219ENST00000488839 DSCR3O14972 297 aa11.84□□□□□ -0.51
SFXN5-219ENST00000488839 CEACAM4O75871 244 aa11.84□□□□□ -0.51
SFXN5-219ENST00000488839 SEC31AO94979 1220 aaKnown RBP11.84□□□□□ -0.51
SFXN5-219ENST00000488839 AHSGP02765 367 aa11.84□□□□□ -0.51
SFXN5-219ENST00000488839 RPA3P35244 121 aaPredicted RBP11.84□□□□□ -0.51
SFXN5-219ENST00000488839 CASRP41180 1078 aa11.84□□□□□ -0.51
SFXN5-219ENST00000488839 RPS18P62269 152 aaKnown RBP11.84□□□□□ -0.51
SFXN5-219ENST00000488839 TAP2Q03519 686 aa11.84□□□□□ -0.51
SFXN5-219ENST00000488839 SP140Q13342 867 aa11.84□□□□□ -0.51
SFXN5-219ENST00000488839 IL10RAQ13651 578 aa11.84□□□□□ -0.51
SFXN5-219ENST00000488839 HIF1AQ16665 826 aa11.84□□□□□ -0.51
SFXN5-219ENST00000488839 KCTD19Q17RG1 926 aaPredicted RBP11.84□□□□□ -0.51
SFXN5-219ENST00000488839 DEFB110Q30KQ9 67 aa11.84□□□□□ -0.51
SFXN5-219ENST00000488839 BBS9Q3SYG4 887 aa11.84□□□□□ -0.51
SFXN5-219ENST00000488839 MSS51Q4VC12 460 aa11.84□□□□□ -0.51
SFXN5-219ENST00000488839 MLIPQ5VWP3 458 aa11.84□□□□□ -0.51
SFXN5-219ENST00000488839 STEAP4Q687X5 459 aa11.84□□□□□ -0.51
SFXN5-219ENST00000488839 OVCH1Q7RTY7 1134 aa11.84□□□□□ -0.51
SFXN5-219ENST00000488839 PRICKLE2Q7Z3G6 844 aa11.84□□□□□ -0.51
SFXN5-219ENST00000488839 PALM2Q8IXS6 379 aa11.84□□□□□ -0.51
SFXN5-219ENST00000488839 GIMAP7Q8NHV1 300 aa11.84□□□□□ -0.51
SFXN5-219ENST00000488839 MCOLN3Q8TDD5 553 aa11.84□□□□□ -0.51
SFXN5-219ENST00000488839 FAM136AQ96C01 138 aa11.84□□□□□ -0.51
SFXN5-219ENST00000488839 RNF31Q96EP0 1072 aa11.84□□□□□ -0.51
SFXN5-219ENST00000488839 MVB12AQ96EY5 273 aa11.84□□□□□ -0.51
SFXN5-219ENST00000488839 VPS50Q96JG6 964 aa11.84□□□□□ -0.51
SFXN5-219ENST00000488839 FER1L6-AS2Q96M78 137 aa11.84□□□□□ -0.51
SFXN5-219ENST00000488839 CCDC138Q96M89 665 aa11.84□□□□□ -0.51
SFXN5-219ENST00000488839 PKP4Q99569 1192 aa11.84□□□□□ -0.51
SFXN5-219ENST00000488839 ZFYVE21Q9BQ24 234 aa11.84□□□□□ -0.51
SFXN5-219ENST00000488839 MRPS30Q9NP92 439 aaKnown RBP11.84□□□□□ -0.51
SFXN5-219ENST00000488839 ZC3H7BQ9UGR2 993 aaKnown RBP11.84□□□□□ -0.51
SFXN5-219ENST00000488839 NXT1Q9UKK6 140 aaKnown RBP11.84□□□□□ -0.51
SFXN5-219ENST00000488839 PYCARDQ9ULZ3 195 aa11.84□□□□□ -0.51
SFXN5-219ENST00000488839 RUVBL2Q9Y230 463 aaKnown RBP11.84□□□□□ -0.51
SFXN5-219ENST00000488839 SPTBP11277 2137 aa11.83□□□□□ -0.52
SFXN5-219ENST00000488839 HYKKA2RU49 373 aa11.83□□□□□ -0.52
SFXN5-219ENST00000488839 E7ESA3 106 aa11.83□□□□□ -0.52
SFXN5-219ENST00000488839 PEX12O00623 359 aa11.83□□□□□ -0.52
SFXN5-219ENST00000488839 TTI1O43156 1089 aa11.83□□□□□ -0.52
SFXN5-219ENST00000488839 WISP1O95388 367 aa11.83□□□□□ -0.52
SFXN5-219ENST00000488839 SLC16A8O95907 504 aa11.83□□□□□ -0.52
SFXN5-219ENST00000488839 ERVK-10P10266 1014 aa11.83□□□□□ -0.52
SFXN5-219ENST00000488839 ALAS2P22557 587 aa11.83□□□□□ -0.52
SFXN5-219ENST00000488839 CCND1P24385 295 aa11.83□□□□□ -0.52
SFXN5-219ENST00000488839 GABRB3P28472 473 aa11.83□□□□□ -0.52
SFXN5-219ENST00000488839 FOLR3P41439 243 aa11.83□□□□□ -0.52
SFXN5-219ENST00000488839 ELK3P41970 407 aa11.83□□□□□ -0.52
SFXN5-219ENST00000488839 CARSP49589 748 aaKnown RBP11.83□□□□□ -0.52
SFXN5-219ENST00000488839 CSRP3P50461 194 aa11.83□□□□□ -0.52
SFXN5-219ENST00000488839 ITGA8P53708 1063 aa11.83□□□□□ -0.52
SFXN5-219ENST00000488839 SOX8P57073 446 aa11.83□□□□□ -0.52
SFXN5-219ENST00000488839 MPP1Q00013 466 aa11.83□□□□□ -0.52
SFXN5-219ENST00000488839 WASHC2DQ5SRD0 308 aa11.83□□□□□ -0.52
SFXN5-219ENST00000488839 TEDDM1Q5T9Z0 273 aa11.83□□□□□ -0.52
SFXN5-219ENST00000488839 GARNL3Q5VVW2 1013 aa11.83□□□□□ -0.52
SFXN5-219ENST00000488839 ICE2Q659A1 982 aa11.83□□□□□ -0.52
SFXN5-219ENST00000488839 ZNF425Q6IV72 752 aa11.83□□□□□ -0.52
SFXN5-219ENST00000488839 FBXO42Q6P3S6 717 aa11.83□□□□□ -0.52
SFXN5-219ENST00000488839 TTLL10Q6ZVT0 673 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms