RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 TIPARPQ7Z3E1 657 aaKnown RBP17.92■□□□□ 0.46
PTCD3-217ENST00000488801 KLHDC8AQ8IYD2 350 aa17.92■□□□□ 0.46
PTCD3-217ENST00000488801 UHMK1Q8TAS1 419 aaKnown RBP17.92■□□□□ 0.46
PTCD3-217ENST00000488801 AENQ8WTP8 325 aaKnown RBP17.92■□□□□ 0.46
PTCD3-217ENST00000488801 KIAA1191Q96A73 305 aa17.92■□□□□ 0.46
PTCD3-217ENST00000488801 MRRFQ96E11 262 aaKnown RBP17.92■□□□□ 0.46
PTCD3-217ENST00000488801 FANCEQ9HB96 536 aa17.92■□□□□ 0.46
PTCD3-217ENST00000488801 INTS7Q9NVH2 962 aaKnown RBP17.92■□□□□ 0.46
PTCD3-217ENST00000488801 ARL15Q9NXU5 204 aa17.92■□□□□ 0.46
PTCD3-217ENST00000488801 CTNNAL1Q9UBT7 734 aa17.92■□□□□ 0.46
PTCD3-217ENST00000488801 PCDHB3Q9Y5E6 796 aa17.92■□□□□ 0.46
PTCD3-217ENST00000488801 MGAQ8IWI9 3026 aa17.92■□□□□ 0.46
PTCD3-217ENST00000488801 TMEM150CB9EJG8 249 aa17.91■□□□□ 0.46
PTCD3-217ENST00000488801 CTSVO60911 334 aa17.91■□□□□ 0.46
PTCD3-217ENST00000488801 CCNDBP1O95273 360 aa17.91■□□□□ 0.46
PTCD3-217ENST00000488801 C2P06681 752 aa17.91■□□□□ 0.46
PTCD3-217ENST00000488801 HIST1H2AGP0C0S8 130 aaPredicted RBP17.91■□□□□ 0.46
PTCD3-217ENST00000488801 HIST1H2ADP20671 130 aa17.91■□□□□ 0.46
PTCD3-217ENST00000488801 CCND1P24385 295 aa17.91■□□□□ 0.46
PTCD3-217ENST00000488801 CMPK1P30085 196 aa17.91■□□□□ 0.46
PTCD3-217ENST00000488801 RPA3P35244 121 aaPredicted RBP17.91■□□□□ 0.46
PTCD3-217ENST00000488801 ABATP80404 500 aa17.91■□□□□ 0.46
PTCD3-217ENST00000488801 RELAQ04206 551 aa17.91■□□□□ 0.46
PTCD3-217ENST00000488801 TLE3Q04726 772 aa17.91■□□□□ 0.46
PTCD3-217ENST00000488801 CSHL1Q14406 222 aa17.91■□□□□ 0.46
PTCD3-217ENST00000488801 DEFB110Q30KQ9 67 aa17.91■□□□□ 0.46
PTCD3-217ENST00000488801 CDKL4Q5MAI5 379 aa17.91■□□□□ 0.46
PTCD3-217ENST00000488801 PRAMEF13Q5VWM6 474 aa17.91■□□□□ 0.46
PTCD3-217ENST00000488801 LCTLQ6UWM7 567 aa17.91■□□□□ 0.46
PTCD3-217ENST00000488801 PAQR7Q86WK9 346 aa17.91■□□□□ 0.46
PTCD3-217ENST00000488801 SPATA6LQ8N4H0 392 aa17.91■□□□□ 0.46
PTCD3-217ENST00000488801 ATL1Q8WXF7 558 aa17.91■□□□□ 0.46
PTCD3-217ENST00000488801 NKD1Q969G9 470 aa17.91■□□□□ 0.46
PTCD3-217ENST00000488801 HIST1H2AHQ96KK5 128 aa17.91■□□□□ 0.46
PTCD3-217ENST00000488801 LRFN5Q96NI6 719 aa17.91■□□□□ 0.46
PTCD3-217ENST00000488801 GPR78Q96P69 363 aa17.91■□□□□ 0.46
PTCD3-217ENST00000488801 HIST1H2AJQ99878 128 aa17.91■□□□□ 0.46
PTCD3-217ENST00000488801 H2AFJQ9BTM1 129 aa17.91■□□□□ 0.46
PTCD3-217ENST00000488801 ACAT2Q9BWD1 397 aa17.91■□□□□ 0.46
PTCD3-217ENST00000488801 TRIM54Q9BYV2 358 aa17.91■□□□□ 0.46
PTCD3-217ENST00000488801 UNKQ9C0B0 810 aaKnown RBP17.91■□□□□ 0.46
PTCD3-217ENST00000488801 PCBD2Q9H0N5 130 aa17.91■□□□□ 0.46
PTCD3-217ENST00000488801 SYNPO2LQ9H987 977 aa17.91■□□□□ 0.46
PTCD3-217ENST00000488801 EURLQ9NYK6 297 aa17.91■□□□□ 0.46
PTCD3-217ENST00000488801 SH2B3Q9UQQ2 575 aa17.91■□□□□ 0.46
PTCD3-217ENST00000488801 A0A087X1B8 175 aa17.9■□□□□ 0.46
PTCD3-217ENST00000488801 CCDC189A1A4V9 331 aa17.9■□□□□ 0.46
PTCD3-217ENST00000488801 POC1B-GALNT4F8VUJ3 575 aa17.9■□□□□ 0.46
PTCD3-217ENST00000488801 CTSBP07858 339 aa17.9■□□□□ 0.46
PTCD3-217ENST00000488801 LTA4HP09960 611 aaKnown RBP17.9■□□□□ 0.46
PTCD3-217ENST00000488801 MSH2P43246 934 aa17.9■□□□□ 0.46
PTCD3-217ENST00000488801 SLC6A12P48065 614 aa17.9■□□□□ 0.46
PTCD3-217ENST00000488801 ITGA1P56199 1179 aa17.9■□□□□ 0.46
PTCD3-217ENST00000488801 IRF9Q00978 393 aa17.9■□□□□ 0.46
PTCD3-217ENST00000488801 TGFBIQ15582 683 aa17.9■□□□□ 0.46
PTCD3-217ENST00000488801 TGIF1Q15583 401 aa17.9■□□□□ 0.46
PTCD3-217ENST00000488801 ERCC6LQ2NKX8 1250 aa17.9■□□□□ 0.46
PTCD3-217ENST00000488801 ZNF517Q6ZMY9 492 aaPredicted RBP17.9■□□□□ 0.46
PTCD3-217ENST00000488801 TAOK1Q7L7X3 1001 aa17.9■□□□□ 0.46
PTCD3-217ENST00000488801 ISCA2Q86U28 154 aa17.9■□□□□ 0.46
PTCD3-217ENST00000488801 PDPRQ8NCN5 879 aa17.9■□□□□ 0.46
PTCD3-217ENST00000488801 MZB1Q8WU39 189 aa17.9■□□□□ 0.46
PTCD3-217ENST00000488801 RHBDF1Q96CC6 855 aa17.9■□□□□ 0.46
PTCD3-217ENST00000488801 OR4K3Q96R72 315 aa17.9■□□□□ 0.46
PTCD3-217ENST00000488801 ATOH8Q96SQ7 321 aa17.9■□□□□ 0.46
PTCD3-217ENST00000488801 PLCD4Q9BRC7 762 aa17.9■□□□□ 0.46
PTCD3-217ENST00000488801 DPH7Q9BTV6 452 aa17.9■□□□□ 0.46
PTCD3-217ENST00000488801 ULBP3Q9BZM4 244 aa17.9■□□□□ 0.46
PTCD3-217ENST00000488801 ATG10Q9H0Y0 220 aa17.9■□□□□ 0.46
PTCD3-217ENST00000488801 MRPS30Q9NP92 439 aaKnown RBP17.9■□□□□ 0.46
PTCD3-217ENST00000488801 CUEDC1Q9NWM3 386 aaPredicted RBP17.9■□□□□ 0.46
PTCD3-217ENST00000488801 UTP6Q9NYH9 597 aaKnown RBP17.9■□□□□ 0.46
PTCD3-217ENST00000488801 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.9■□□□□ 0.46
PTCD3-217ENST00000488801 RAB21Q9UL25 225 aa17.9■□□□□ 0.46
PTCD3-217ENST00000488801 PLCL2Q9UPR0 1127 aa17.9■□□□□ 0.46
PTCD3-217ENST00000488801 ACOT9Q9Y305 439 aa17.9■□□□□ 0.46
PTCD3-217ENST00000488801 V9GYY5 206 aaPredicted RBP17.9■□□□□ 0.46
PTCD3-217ENST00000488801 A0A096LPK6 155 aa17.89■□□□□ 0.45
PTCD3-217ENST00000488801 TERTO14746 1132 aaKnown RBP17.89■□□□□ 0.45
PTCD3-217ENST00000488801 MAP3K7O43318 606 aa17.89■□□□□ 0.45
PTCD3-217ENST00000488801 RAD1O60671 282 aa17.89■□□□□ 0.45
PTCD3-217ENST00000488801 KRT38O76015 456 aa17.89■□□□□ 0.45
PTCD3-217ENST00000488801 KIAA0754O94854 1291 aa17.89■□□□□ 0.45
PTCD3-217ENST00000488801 GUCA1CO95843 209 aa17.89■□□□□ 0.45
PTCD3-217ENST00000488801 ITPKBP27987 946 aa17.89■□□□□ 0.45
PTCD3-217ENST00000488801 RORAP35398 523 aa17.89■□□□□ 0.45
PTCD3-217ENST00000488801 KCNC1P48547 511 aa17.89■□□□□ 0.45
PTCD3-217ENST00000488801 HNMTP50135 292 aa17.89■□□□□ 0.45
PTCD3-217ENST00000488801 NAE1Q13564 534 aa17.89■□□□□ 0.45
PTCD3-217ENST00000488801 ZNF385CQ66K41 422 aaPredicted RBP17.89■□□□□ 0.45
PTCD3-217ENST00000488801 TBC1D1Q86TI0 1168 aaPredicted RBP17.89■□□□□ 0.45
PTCD3-217ENST00000488801 NLGN4XQ8N0W4 816 aa17.89■□□□□ 0.45
PTCD3-217ENST00000488801 SLC38A9Q8NBW4 561 aa17.89■□□□□ 0.45
PTCD3-217ENST00000488801 NLGN4YQ8NFZ3 816 aaPredicted RBP17.89■□□□□ 0.45
PTCD3-217ENST00000488801 KCTD4Q8WVF5 259 aa17.89■□□□□ 0.45
PTCD3-217ENST00000488801 DCBLD2Q96PD2 775 aa17.89■□□□□ 0.45
PTCD3-217ENST00000488801 NMRAL1Q9HBL8 299 aa17.89■□□□□ 0.45
PTCD3-217ENST00000488801 IKBKGQ9Y6K9 419 aa17.89■□□□□ 0.45
PTCD3-217ENST00000488801 SCN2AQ99250 2005 aa17.88■□□□□ 0.45
PTCD3-217ENST00000488801 ZFYVE26Q68DK2 2539 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms