RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 COLEC12Q5KU26 742 aa17■□□□□ 0.31
ITGB1-215ENST00000488494 FRMPD2BQ6IN97 320 aa17■□□□□ 0.31
ITGB1-215ENST00000488494 TRMT10BQ6PF06 316 aaKnown RBP17■□□□□ 0.31
ITGB1-215ENST00000488494 KIAA0408Q6ZU52 694 aa17■□□□□ 0.31
ITGB1-215ENST00000488494 MRGPREQ86SM8 312 aa17■□□□□ 0.31
ITGB1-215ENST00000488494 RAB43Q86YS6 212 aa17■□□□□ 0.31
ITGB1-215ENST00000488494 TTC29Q8NA56 475 aaPredicted RBP17■□□□□ 0.31
ITGB1-215ENST00000488494 FBXO15Q8NCQ5 510 aaPredicted RBP17■□□□□ 0.31
ITGB1-215ENST00000488494 ZNF480Q8WV37 535 aa17■□□□□ 0.31
ITGB1-215ENST00000488494 ZUFSPQ96AP4 578 aa17■□□□□ 0.31
ITGB1-215ENST00000488494 ZNF285Q96NJ3 590 aa17■□□□□ 0.31
ITGB1-215ENST00000488494 ING2Q9H160 280 aa17■□□□□ 0.31
ITGB1-215ENST00000488494 CUTCQ9NTM9 273 aa17■□□□□ 0.31
ITGB1-215ENST00000488494 ABCF3Q9NUQ8 709 aa17■□□□□ 0.31
ITGB1-215ENST00000488494 RNF14Q9UBS8 474 aa17■□□□□ 0.31
ITGB1-215ENST00000488494 A0A0J9YVX5 310 aa16.99■□□□□ 0.31
ITGB1-215ENST00000488494 OR2A25A4D2G3 310 aa16.99■□□□□ 0.31
ITGB1-215ENST00000488494 EFCAB8A8MWE9 144 aa16.99■□□□□ 0.31
ITGB1-215ENST00000488494 EIF3FO00303 357 aaPredicted RBP16.99■□□□□ 0.31
ITGB1-215ENST00000488494 DSCR3O14972 297 aa16.99■□□□□ 0.31
ITGB1-215ENST00000488494 TP73O15350 636 aa16.99■□□□□ 0.31
ITGB1-215ENST00000488494 CNOT3O75175 753 aaKnown RBP16.99■□□□□ 0.31
ITGB1-215ENST00000488494 PDGFAP04085 211 aa16.99■□□□□ 0.31
ITGB1-215ENST00000488494 RPL21P46778 160 aaKnown RBP16.99■□□□□ 0.31
ITGB1-215ENST00000488494 ARSFP54793 590 aa16.99■□□□□ 0.31
ITGB1-215ENST00000488494 MRPS25P82663 173 aaKnown RBP16.99■□□□□ 0.31
ITGB1-215ENST00000488494 TIAL1Q01085 375 aaKnown RBP eCLIP16.99■□□□□ 0.31
ITGB1-215ENST00000488494 STEAP4Q687X5 459 aa16.99■□□□□ 0.31
ITGB1-215ENST00000488494 TCTN3Q6NUS6 607 aa16.99■□□□□ 0.31
ITGB1-215ENST00000488494 UGT3A1Q6NUS8 523 aa16.99■□□□□ 0.31
ITGB1-215ENST00000488494 ASB18Q6ZVZ8 466 aa16.99■□□□□ 0.31
ITGB1-215ENST00000488494 UBE2R2Q712K3 238 aaPredicted RBP16.99■□□□□ 0.31
ITGB1-215ENST00000488494 ANKMY2Q8IV38 441 aa16.99■□□□□ 0.31
ITGB1-215ENST00000488494 METTL27Q8N6F8 245 aaPredicted RBP16.99■□□□□ 0.31
ITGB1-215ENST00000488494 LRRC39Q96DD0 335 aa16.99■□□□□ 0.31
ITGB1-215ENST00000488494 ZFYVE21Q9BQ24 234 aa16.99■□□□□ 0.31
ITGB1-215ENST00000488494 EPN3Q9H201 632 aa16.99■□□□□ 0.31
ITGB1-215ENST00000488494 MRPS30Q9NP92 439 aaKnown RBP16.99■□□□□ 0.31
ITGB1-215ENST00000488494 SLC22A11Q9NSA0 550 aa16.99■□□□□ 0.31
ITGB1-215ENST00000488494 TAS2R13Q9NYV9 303 aa16.99■□□□□ 0.31
ITGB1-215ENST00000488494 TEX264Q9Y6I9 313 aa16.99■□□□□ 0.31
ITGB1-215ENST00000488494 LOC105369274A0A096LPK9 316 aa16.98■□□□□ 0.31
ITGB1-215ENST00000488494 IGKV1-8A0A0C4DH67 115 aa16.98■□□□□ 0.31
ITGB1-215ENST00000488494 LOC102723532A0A0G2JNH3 316 aa16.98■□□□□ 0.31
ITGB1-215ENST00000488494 FITM1A5D6W6 292 aa16.98■□□□□ 0.31
ITGB1-215ENST00000488494 GFYI3L273 518 aa16.98■□□□□ 0.31
ITGB1-215ENST00000488494 ZBTB14O43829 449 aa16.98■□□□□ 0.31
ITGB1-215ENST00000488494 CCNDBP1O95273 360 aa16.98■□□□□ 0.31
ITGB1-215ENST00000488494 ZIC2O95409 532 aaPredicted RBP16.98■□□□□ 0.31
ITGB1-215ENST00000488494 AHSGP02765 367 aa16.98■□□□□ 0.31
ITGB1-215ENST00000488494 SKIV2L2P42285 1042 aaKnown RBP16.98■□□□□ 0.31
ITGB1-215ENST00000488494 RGS4P49798 205 aa16.98■□□□□ 0.31
ITGB1-215ENST00000488494 PGDP52209 483 aa16.98■□□□□ 0.31
ITGB1-215ENST00000488494 TLE1Q04724 770 aa16.98■□□□□ 0.31
ITGB1-215ENST00000488494 FASTKD3Q14CZ7 662 aaKnown RBP16.98■□□□□ 0.31
ITGB1-215ENST00000488494 WASHC2DQ5SRD0 308 aa16.98■□□□□ 0.31
ITGB1-215ENST00000488494 YOD1Q5VVQ6 348 aaPredicted RBP16.98■□□□□ 0.31
ITGB1-215ENST00000488494 ICE2Q659A1 982 aa16.98■□□□□ 0.31
ITGB1-215ENST00000488494 LRRC8EQ6NSJ5 796 aa16.98■□□□□ 0.31
ITGB1-215ENST00000488494 MRPL14Q6P1L8 145 aaKnown RBP16.98■□□□□ 0.31
ITGB1-215ENST00000488494 CYHR1Q6ZMK1 362 aa16.98■□□□□ 0.31
ITGB1-215ENST00000488494 OR4N4Q8N0Y3 316 aa16.98■□□□□ 0.31
ITGB1-215ENST00000488494 DTWD1Q8N5C7 304 aa16.98■□□□□ 0.31
ITGB1-215ENST00000488494 GPATCH11Q8N954 259 aa16.98■□□□□ 0.31
ITGB1-215ENST00000488494 OR2Y1Q8NGV0 311 aa16.98■□□□□ 0.31
ITGB1-215ENST00000488494 FKBP10Q96AY3 582 aa16.98■□□□□ 0.31
ITGB1-215ENST00000488494 LINGO1Q96FE5 620 aa16.98■□□□□ 0.31
ITGB1-215ENST00000488494 PLCD4Q9BRC7 762 aa16.98■□□□□ 0.31
ITGB1-215ENST00000488494 SLC25A23Q9BV35 468 aa16.98■□□□□ 0.31
ITGB1-215ENST00000488494 ENAMQ9NRM1 1142 aa16.98■□□□□ 0.31
ITGB1-215ENST00000488494 ANKMY1Q9P2S6 941 aa16.98■□□□□ 0.31
ITGB1-215ENST00000488494 ANAPC2Q9UJX6 822 aa16.98■□□□□ 0.31
ITGB1-215ENST00000488494 ADAMTS6Q9UKP5 1117 aa16.98■□□□□ 0.31
ITGB1-215ENST00000488494 SNX24Q9Y343 169 aa16.98■□□□□ 0.31
ITGB1-215ENST00000488494 MYO18BQ8IUG5 2567 aa16.97■□□□□ 0.31
ITGB1-215ENST00000488494 E7ENX8 843 aa16.97■□□□□ 0.31
ITGB1-215ENST00000488494 EIF2S1P05198 315 aaKnown RBP16.97■□□□□ 0.31
ITGB1-215ENST00000488494 IMPA1P29218 277 aa16.97■□□□□ 0.31
ITGB1-215ENST00000488494 CCL11P51671 97 aa16.97■□□□□ 0.31
ITGB1-215ENST00000488494 TAP2Q03519 686 aa16.97■□□□□ 0.31
ITGB1-215ENST00000488494 C2orf54Q08AI8 447 aa16.97■□□□□ 0.31
ITGB1-215ENST00000488494 PDIA2Q13087 525 aaKnown RBP16.97■□□□□ 0.31
ITGB1-215ENST00000488494 SP140Q13342 867 aa16.97■□□□□ 0.31
ITGB1-215ENST00000488494 TEDDM1Q5T9Z0 273 aa16.97■□□□□ 0.31
ITGB1-215ENST00000488494 THEMIS2Q5TEJ8 643 aa16.97■□□□□ 0.31
ITGB1-215ENST00000488494 PAQR3Q6TCH7 311 aa16.97■□□□□ 0.31
ITGB1-215ENST00000488494 COX15Q7KZN9 410 aa16.97■□□□□ 0.31
ITGB1-215ENST00000488494 GALNT7Q86SF2 657 aa16.97■□□□□ 0.31
ITGB1-215ENST00000488494 PAQR7Q86WK9 346 aa16.97■□□□□ 0.31
ITGB1-215ENST00000488494 TMEM151BQ8IW70 566 aa16.97■□□□□ 0.31
ITGB1-215ENST00000488494 MYO1HQ8N1T3 1032 aa16.97■□□□□ 0.31
ITGB1-215ENST00000488494 FBXO36Q8NEA4 188 aa16.97■□□□□ 0.31
ITGB1-215ENST00000488494 EEF1AKMT1Q8WVE0 214 aa16.97■□□□□ 0.31
ITGB1-215ENST00000488494 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.97■□□□□ 0.31
ITGB1-215ENST00000488494 SYNPO2LQ9H987 977 aa16.97■□□□□ 0.31
ITGB1-215ENST00000488494 CTSFQ9UBX1 484 aa16.97■□□□□ 0.31
ITGB1-215ENST00000488494 SPENQ96T58 3664 aaKnown RBP16.97■□□□□ 0.31
ITGB1-215ENST00000488494 HYKKA2RU49 373 aa16.96■□□□□ 0.31
ITGB1-215ENST00000488494 SRPX2O60687 465 aaPredicted RBP16.96■□□□□ 0.31
ITGB1-215ENST00000488494 MED26O95402 600 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms