RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 TGDSO95455 350 aa10.66□□□□□ -0.7
HDLBP-242ENST00000488013 LDOC1O95751 146 aaPredicted RBP10.66□□□□□ -0.7
HDLBP-242ENST00000488013 PROS1P07225 676 aa10.66□□□□□ -0.7
HDLBP-242ENST00000488013 VIMP08670 466 aaKnown RBP10.66□□□□□ -0.7
HDLBP-242ENST00000488013 CKMT2P17540 419 aa10.66□□□□□ -0.7
HDLBP-242ENST00000488013 LSP1P33241 339 aa10.66□□□□□ -0.7
HDLBP-242ENST00000488013 ARL1P40616 181 aaPredicted RBP10.66□□□□□ -0.7
HDLBP-242ENST00000488013 GDF5P43026 501 aa10.66□□□□□ -0.7
HDLBP-242ENST00000488013 OCRLQ01968 901 aa10.66□□□□□ -0.7
HDLBP-242ENST00000488013 TSTA3Q13630 321 aaPredicted RBP10.66□□□□□ -0.7
HDLBP-242ENST00000488013 CCDC6Q16204 474 aa10.66□□□□□ -0.7
HDLBP-242ENST00000488013 RBBP7Q16576 425 aa10.66□□□□□ -0.7
HDLBP-242ENST00000488013 ICE2Q659A1 982 aa10.66□□□□□ -0.7
HDLBP-242ENST00000488013 ATG9BQ674R7 924 aa10.66□□□□□ -0.7
HDLBP-242ENST00000488013 WDR74Q6RFH5 385 aaPredicted RBP10.66□□□□□ -0.7
HDLBP-242ENST00000488013 MILR1Q7Z6M3 343 aa10.66□□□□□ -0.7
HDLBP-242ENST00000488013 CUZD1Q86UP6 607 aa10.66□□□□□ -0.7
HDLBP-242ENST00000488013 WDR75Q8IWA0 830 aaKnown RBP10.66□□□□□ -0.7
HDLBP-242ENST00000488013 ADGRF3Q8IZF5 1079 aa10.66□□□□□ -0.7
HDLBP-242ENST00000488013 CLYBLQ8N0X4 340 aa10.66□□□□□ -0.7
HDLBP-242ENST00000488013 LINC01555Q8NAE3 123 aa10.66□□□□□ -0.7
HDLBP-242ENST00000488013 TTLQ8NG68 377 aa10.66□□□□□ -0.7
HDLBP-242ENST00000488013 RHBDD1Q8TEB9 315 aa10.66□□□□□ -0.7
HDLBP-242ENST00000488013 TRPC4APQ8TEL6 797 aa10.66□□□□□ -0.7
HDLBP-242ENST00000488013 ZUFSPQ96AP4 578 aa10.66□□□□□ -0.7
HDLBP-242ENST00000488013 PYCR2Q96C36 320 aa10.66□□□□□ -0.7
HDLBP-242ENST00000488013 WDR34Q96EX3 536 aa10.66□□□□□ -0.7
HDLBP-242ENST00000488013 PTCD3Q96EY7 689 aaKnown RBP10.66□□□□□ -0.7
HDLBP-242ENST00000488013 IL17FQ96PD4 163 aa10.66□□□□□ -0.7
HDLBP-242ENST00000488013 AIF1LQ9BQI0 150 aa10.66□□□□□ -0.7
HDLBP-242ENST00000488013 SLC29A3Q9BZD2 475 aa10.66□□□□□ -0.7
HDLBP-242ENST00000488013 SMOC1Q9H4F8 434 aa10.66□□□□□ -0.7
HDLBP-242ENST00000488013 GSTO2Q9H4Y5 243 aa10.66□□□□□ -0.7
HDLBP-242ENST00000488013 PELI2Q9HAT8 420 aa10.66□□□□□ -0.7
HDLBP-242ENST00000488013 MRPS30Q9NP92 439 aaKnown RBP10.66□□□□□ -0.7
HDLBP-242ENST00000488013 SEMA4BQ9NPR2 832 aaPredicted RBP10.66□□□□□ -0.7
HDLBP-242ENST00000488013 ACTR10Q9NZ32 417 aa10.66□□□□□ -0.7
HDLBP-242ENST00000488013 FTSJ1Q9UET6 329 aa10.66□□□□□ -0.7
HDLBP-242ENST00000488013 TAC3Q9UHF0 121 aa10.66□□□□□ -0.7
HDLBP-242ENST00000488013 PLAGL1Q9UM63 463 aa10.66□□□□□ -0.7
HDLBP-242ENST00000488013 SNX6Q9UNH7 406 aa10.66□□□□□ -0.7
HDLBP-242ENST00000488013 PCDHGA11Q9Y5H2 935 aa10.66□□□□□ -0.7
HDLBP-242ENST00000488013 KLK4Q9Y5K2 254 aa10.66□□□□□ -0.7
HDLBP-242ENST00000488013 RNF215Q9Y6U7 377 aa10.66□□□□□ -0.7
HDLBP-242ENST00000488013 SDK1Q7Z5N4 2213 aa10.66□□□□□ -0.7
HDLBP-242ENST00000488013 THADAQ6YHU6 1953 aa10.66□□□□□ -0.7
HDLBP-242ENST00000488013 PLXNB3Q9ULL4 1909 aa10.66□□□□□ -0.7
HDLBP-242ENST00000488013 GSAPA4D1B5 854 aa10.65□□□□□ -0.7
HDLBP-242ENST00000488013 GMNCA6NCL1 334 aa10.65□□□□□ -0.7
HDLBP-242ENST00000488013 CDX4O14627 284 aaPredicted RBP10.65□□□□□ -0.7
HDLBP-242ENST00000488013 PRICKLE3O43900 615 aaPredicted RBP10.65□□□□□ -0.7
HDLBP-242ENST00000488013 WFS1O76024 890 aa10.65□□□□□ -0.7
HDLBP-242ENST00000488013 KRT6AP02538 564 aa10.65□□□□□ -0.7
HDLBP-242ENST00000488013 KRT6BP04259 564 aa10.65□□□□□ -0.7
HDLBP-242ENST00000488013 TROVE2P10155 538 aaKnown RBP eCLIP10.65□□□□□ -0.7
HDLBP-242ENST00000488013 PCSK2P16519 638 aa10.65□□□□□ -0.7
HDLBP-242ENST00000488013 ALDH4A1P30038 563 aa10.65□□□□□ -0.7
HDLBP-242ENST00000488013 KRT6CP48668 564 aa10.65□□□□□ -0.7
HDLBP-242ENST00000488013 PPM1FP49593 454 aaPredicted RBP10.65□□□□□ -0.7
HDLBP-242ENST00000488013 RPL14P50914 215 aaKnown RBP10.65□□□□□ -0.7
HDLBP-242ENST00000488013 LIMK1P53667 647 aa10.65□□□□□ -0.7
HDLBP-242ENST00000488013 CDH13P55290 713 aa10.65□□□□□ -0.7
HDLBP-242ENST00000488013 GNGT1P63211 74 aa10.65□□□□□ -0.7
HDLBP-242ENST00000488013 PHEXP78562 749 aa10.65□□□□□ -0.7
HDLBP-242ENST00000488013 E2F1Q01094 437 aa10.65□□□□□ -0.7
HDLBP-242ENST00000488013 E2F2Q14209 437 aa10.65□□□□□ -0.7
HDLBP-242ENST00000488013 SF3A2Q15428 464 aaKnown RBP10.65□□□□□ -0.7
HDLBP-242ENST00000488013 XKR6Q5GH73 641 aa10.65□□□□□ -0.7
HDLBP-242ENST00000488013 SPESP1Q6UW49 350 aa10.65□□□□□ -0.7
HDLBP-242ENST00000488013 NXPE4Q6UWF7 544 aa10.65□□□□□ -0.7
HDLBP-242ENST00000488013 ZCCHC23Q6ZST2 131 aa10.65□□□□□ -0.7
HDLBP-242ENST00000488013 SPNS2Q8IVW8 549 aa10.65□□□□□ -0.7
HDLBP-242ENST00000488013 L3MBTL4Q8NA19 623 aa10.65□□□□□ -0.7
HDLBP-242ENST00000488013 OR2L3Q8NG85 312 aa10.65□□□□□ -0.7
HDLBP-242ENST00000488013 OR2A1Q8NGT9 310 aa10.65□□□□□ -0.7
HDLBP-242ENST00000488013 PIWIL2Q8TC59 973 aaKnown RBP10.65□□□□□ -0.7
HDLBP-242ENST00000488013 CCT6BQ92526 530 aa10.65□□□□□ -0.7
HDLBP-242ENST00000488013 ESAMQ96AP7 390 aa10.65□□□□□ -0.7
HDLBP-242ENST00000488013 THAP11Q96EK4 314 aa10.65□□□□□ -0.7
HDLBP-242ENST00000488013 CNDP2Q96KP4 475 aaKnown RBP10.65□□□□□ -0.7
HDLBP-242ENST00000488013 CHRNA10Q9GZZ6 450 aa10.65□□□□□ -0.7
HDLBP-242ENST00000488013 XKR8Q9H6D3 395 aa10.65□□□□□ -0.7
HDLBP-242ENST00000488013 NT5DC2Q9H857 520 aa10.65□□□□□ -0.7
HDLBP-242ENST00000488013 MID1IP1Q9NPA3 183 aa10.65□□□□□ -0.7
HDLBP-242ENST00000488013 C1GALT1Q9NS00 363 aa10.65□□□□□ -0.7
HDLBP-242ENST00000488013 TMEM184CQ9NVA4 438 aa10.65□□□□□ -0.7
HDLBP-242ENST00000488013 TRPS1Q9UHF7 1281 aa10.65□□□□□ -0.7
HDLBP-242ENST00000488013 POMT2Q9UKY4 750 aa10.65□□□□□ -0.7
HDLBP-242ENST00000488013 TSC22D4Q9Y3Q8 395 aa10.65□□□□□ -0.7
HDLBP-242ENST00000488013 TRAF6Q9Y4K3 522 aa10.65□□□□□ -0.7
HDLBP-242ENST00000488013 IGHV1OR21-1A0A087WYE8 117 aa10.64□□□□□ -0.71
HDLBP-242ENST00000488013 PRAMEF33A0A0G2JMD5 474 aa10.64□□□□□ -0.71
HDLBP-242ENST00000488013 A0A1W2PPV9 198 aa10.64□□□□□ -0.71
HDLBP-242ENST00000488013 CPED1A4D0V7 1026 aa10.64□□□□□ -0.71
HDLBP-242ENST00000488013 TRPC5OSA6NMA1 111 aa10.64□□□□□ -0.71
HDLBP-242ENST00000488013 H0YIV9 168 aa10.64□□□□□ -0.71
HDLBP-242ENST00000488013 BTN3A3O00478 584 aa10.64□□□□□ -0.71
HDLBP-242ENST00000488013 AZIN1O14977 448 aa10.64□□□□□ -0.71
HDLBP-242ENST00000488013 TNFSF14O43557 240 aa10.64□□□□□ -0.71
HDLBP-242ENST00000488013 EDF1O60869 148 aaKnown RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms