RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 HNRNPKP61978 463 aaKnown RBP eCLIP3.2□□□□□ -1.95e-13■■■■■ 46
SMC4-219ENST00000487747 IRX4P78413 519 aa3.2□□□□□ -1.9
SMC4-219ENST00000487747 DLK1P80370 383 aa3.2□□□□□ -1.9
SMC4-219ENST00000487747 FCHO2Q0JRZ9 810 aa3.2□□□□□ -1.9
SMC4-219ENST00000487747 TAB1Q15750 504 aa3.2□□□□□ -1.9
SMC4-219ENST00000487747 TMEM211Q6ICI0 200 aa3.2□□□□□ -1.9
SMC4-219ENST00000487747 NOTUMQ6P988 496 aa3.2□□□□□ -1.9
SMC4-219ENST00000487747 KBTBD6Q86V97 674 aa3.2□□□□□ -1.9
SMC4-219ENST00000487747 SMC5Q8IY18 1101 aa3.2□□□□□ -1.9
SMC4-219ENST00000487747 Q8N7P7 452 aa3.2□□□□□ -1.9
SMC4-219ENST00000487747 TRPV4Q9HBA0 871 aa3.2□□□□□ -1.9
SMC4-219ENST00000487747 SUCLA2Q9P2R7 463 aaPredicted RBP3.2□□□□□ -1.9
SMC4-219ENST00000487747 C19orf25Q9UFG5 118 aaPredicted RBP3.2□□□□□ -1.9
SMC4-219ENST00000487747 WBP11Q9Y2W2 641 aaKnown RBP3.2□□□□□ -1.9
SMC4-219ENST00000487747 IGHV4-30-2A0A087WSY4 118 aa3.19□□□□□ -1.9
SMC4-219ENST00000487747 B4DLN1 442 aa3.19□□□□□ -1.9
SMC4-219ENST00000487747 H0YAE9 185 aa3.19□□□□□ -1.9
SMC4-219ENST00000487747 VILLO15195 856 aa3.19□□□□□ -1.9
SMC4-219ENST00000487747 CEACAM4O75871 244 aa3.19□□□□□ -1.9
SMC4-219ENST00000487747 PIK3R1P27986 724 aa3.19□□□□□ -1.9
SMC4-219ENST00000487747 MRPL12P52815 198 aaKnown RBP3.19□□□□□ -1.9
SMC4-219ENST00000487747 DCAF7P61962 342 aa3.19□□□□□ -1.9
SMC4-219ENST00000487747 AIMP2Q13155 320 aaKnown RBP3.19□□□□□ -1.9
SMC4-219ENST00000487747 CCDC30Q5VVM6 783 aa3.19□□□□□ -1.9
SMC4-219ENST00000487747 VITQ6UXI7 678 aa3.19□□□□□ -1.9
SMC4-219ENST00000487747 KLHDC1Q8N7A1 406 aa3.19□□□□□ -1.9
SMC4-219ENST00000487747 C9orf43Q8TAL5 461 aaPredicted RBP3.19□□□□□ -1.9
SMC4-219ENST00000487747 PTPMT1Q8WUK0 201 aaPredicted RBP3.19□□□□□ -1.9
SMC4-219ENST00000487747 SPDL1Q96EA4 605 aa3.19□□□□□ -1.9
SMC4-219ENST00000487747 THOC1Q96FV9 657 aaKnown RBP3.19□□□□□ -1.9
SMC4-219ENST00000487747 WNT5BQ9H1J7 359 aa3.19□□□□□ -1.9
SMC4-219ENST00000487747 FBXO2Q9UK22 296 aaPredicted RBP3.19□□□□□ -1.9
SMC4-219ENST00000487747 PADI2Q9Y2J8 665 aa3.19□□□□□ -1.9
SMC4-219ENST00000487747 GJA1P17302 382 aa3.18□□□□□ -1.9
SMC4-219ENST00000487747 CD27P26842 260 aa3.18□□□□□ -1.9
SMC4-219ENST00000487747 KRTAP10-1P60331 282 aa3.18□□□□□ -1.9
SMC4-219ENST00000487747 GPR33Q49SQ1 333 aa3.18□□□□□ -1.9
SMC4-219ENST00000487747 GARNL3Q5VVW2 1013 aa3.18□□□□□ -1.9
SMC4-219ENST00000487747 KRT79Q5XKE5 535 aa3.18□□□□□ -1.9
SMC4-219ENST00000487747 C11orf63Q6NUN7 778 aa3.18□□□□□ -1.9
SMC4-219ENST00000487747 LCLAT1Q6UWP7 414 aa3.18□□□□□ -1.9
SMC4-219ENST00000487747 NUP54Q7Z3B4 507 aa3.18□□□□□ -1.9
SMC4-219ENST00000487747 LGI2Q8N0V4 545 aa3.18□□□□□ -1.9
SMC4-219ENST00000487747 OR7A2PQ8NGA2 310 aa3.18□□□□□ -1.9
SMC4-219ENST00000487747 EXD1Q8NHP7 514 aa3.18□□□□□ -1.9
SMC4-219ENST00000487747 SYN2Q92777 582 aaPredicted RBP3.18□□□□□ -1.9
SMC4-219ENST00000487747 MS4A10Q96PG2 267 aa3.18□□□□□ -1.9
SMC4-219ENST00000487747 NYXQ9GZU5 481 aa3.18□□□□□ -1.9
SMC4-219ENST00000487747 SLITRK2Q9H156 845 aa3.18□□□□□ -1.9
SMC4-219ENST00000487747 ADNPQ9H2P0 1102 aa3.18□□□□□ -1.9
SMC4-219ENST00000487747 MMP27Q9H306 513 aa3.18□□□□□ -1.9
SMC4-219ENST00000487747 GPN1Q9HCN4 374 aaPredicted RBP3.18□□□□□ -1.9
SMC4-219ENST00000487747 CLIP2Q9UDT6 1046 aa3.18□□□□□ -1.9
SMC4-219ENST00000487747 PTRH2Q9Y3E5 179 aaKnown RBP3.18□□□□□ -1.9
SMC4-219ENST00000487747 ZNF644Q9H582 1327 aaPredicted RBP3.18□□□□□ -1.9
SMC4-219ENST00000487747 A0A087WWV3 80 aa3.17□□□□□ -1.9
SMC4-219ENST00000487747 LOC102723996A0A087X1L8 192 aa3.17□□□□□ -1.9
SMC4-219ENST00000487747 TRBV5-5A0A0J9YX44 114 aa3.17□□□□□ -1.9
SMC4-219ENST00000487747 A0A1W2PQ09 198 aa3.17□□□□□ -1.9
SMC4-219ENST00000487747 ARPC2O15144 300 aa3.17□□□□□ -1.9
SMC4-219ENST00000487747 HPP00738 406 aa3.17□□□□□ -1.9
SMC4-219ENST00000487747 DANCRP0C864 163 aa3.17□□□□□ -1.9
SMC4-219ENST00000487747 SELEP16581 610 aa3.17□□□□□ -1.9
SMC4-219ENST00000487747 TNFAIP3P21580 790 aa3.17□□□□□ -1.9
SMC4-219ENST00000487747 OR3A2P47893 321 aa3.17□□□□□ -1.9
SMC4-219ENST00000487747 DNA2P51530 1060 aa3.17□□□□□ -1.9
SMC4-219ENST00000487747 NDPQ00604 133 aa3.17□□□□□ -1.9
SMC4-219ENST00000487747 ITGA7Q13683 1181 aa3.17□□□□□ -1.9
SMC4-219ENST00000487747 PTPN14Q15678 1187 aa3.17□□□□□ -1.9
SMC4-219ENST00000487747 SPECC1Q5M775 1068 aa3.17□□□□□ -1.9
SMC4-219ENST00000487747 CDHR3Q6ZTQ4 885 aa3.17□□□□□ -1.9
SMC4-219ENST00000487747 RTL3Q8N8U3 475 aaKnown RBP3.17□□□□□ -1.9
SMC4-219ENST00000487747 C1orf131Q8NDD1 294 aaKnown RBP3.17□□□□□ -1.9
SMC4-219ENST00000487747 RFT1Q96AA3 541 aa3.17□□□□□ -1.9
SMC4-219ENST00000487747 CHCHD5Q9BSY4 110 aa3.17□□□□□ -1.9
SMC4-219ENST00000487747 OPA3Q9H6K4 179 aa3.17□□□□□ -1.9
SMC4-219ENST00000487747 EQTNQ9NQ60 294 aa3.17□□□□□ -1.9
SMC4-219ENST00000487747 IGLV4-3A0A075B6K6 122 aa3.16□□□□□ -1.9
SMC4-219ENST00000487747 GPR75-ASB3A0A0A6YYF3 556 aa3.16□□□□□ -1.9
SMC4-219ENST00000487747 TRBV4-1A0A0J9YWV2 114 aa3.16□□□□□ -1.9
SMC4-219ENST00000487747 GLTPD2A6NH11 291 aa3.16□□□□□ -1.9
SMC4-219ENST00000487747 AGAP14A8MT82 685 aa3.16□□□□□ -1.9
SMC4-219ENST00000487747 F5H0A9 414 aaPredicted RBP3.16□□□□□ -1.9
SMC4-219ENST00000487747 K7EQD1 137 aa3.16□□□□□ -1.9
SMC4-219ENST00000487747 AP3D1O14617 1153 aa3.16□□□□□ -1.9
SMC4-219ENST00000487747 TLX2O43763 284 aaPredicted RBP3.16□□□□□ -1.9
SMC4-219ENST00000487747 ZNF354AO60765 605 aaPredicted RBP3.16□□□□□ -1.9
SMC4-219ENST00000487747 IGHV2-70P01814 119 aa3.16□□□□□ -1.9
SMC4-219ENST00000487747 GP1BBP13224 206 aa3.16□□□□□ -1.9
SMC4-219ENST00000487747 KLK2P20151 261 aa3.16□□□□□ -1.9
SMC4-219ENST00000487747 PSMB10P40306 273 aa3.16□□□□□ -1.9
SMC4-219ENST00000487747 TRA2AQ13595 282 aaKnown RBP eCLIP3.16□□□□□ -1.97e-7■■■□□ 15.1
SMC4-219ENST00000487747 C3AR1Q16581 482 aa3.16□□□□□ -1.9
SMC4-219ENST00000487747 LCE1CQ5T751 118 aa3.16□□□□□ -1.9
SMC4-219ENST00000487747 LCE1BQ5T7P3 118 aa3.16□□□□□ -1.9
SMC4-219ENST00000487747 REG3GQ6UW15 175 aa3.16□□□□□ -1.9
SMC4-219ENST00000487747 Q6ZVH6 145 aa3.16□□□□□ -1.9
SMC4-219ENST00000487747 ZER1Q7Z7L7 766 aa3.16□□□□□ -1.9
SMC4-219ENST00000487747 GPD1LQ8N335 351 aa3.16□□□□□ -1.9
SMC4-219ENST00000487747 OR10Q1Q8NGQ4 319 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms