RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 SLC22A18ASQ8N1D0 253 aa9.13□□□□□ -0.95
SF3B1-211ENST00000487698 FRMD1Q8N878 549 aa9.13□□□□□ -0.95
SF3B1-211ENST00000487698 WDR60Q8WVS4 1066 aa9.13□□□□□ -0.95
SF3B1-211ENST00000487698 SLC5A11Q8WWX8 675 aa9.13□□□□□ -0.95
SF3B1-211ENST00000487698 CLDN23Q96B33 292 aa9.13□□□□□ -0.95
SF3B1-211ENST00000487698 MTFMTQ96DP5 389 aaKnown RBP9.13□□□□□ -0.95
SF3B1-211ENST00000487698 NRTNQ99748 197 aa9.13□□□□□ -0.95
SF3B1-211ENST00000487698 GPR174Q9BXC1 333 aa9.13□□□□□ -0.95
SF3B1-211ENST00000487698 MRPL1Q9BYD6 325 aaKnown RBP9.13□□□□□ -0.95
SF3B1-211ENST00000487698 TPSD1Q9BZJ3 242 aa9.13□□□□□ -0.95
SF3B1-211ENST00000487698 WDR41Q9HAD4 459 aa9.13□□□□□ -0.95
SF3B1-211ENST00000487698 SPATA6Q9NWH7 488 aaPredicted RBP9.13□□□□□ -0.95
SF3B1-211ENST00000487698 PCOLCE2Q9UKZ9 415 aa9.13□□□□□ -0.95
SF3B1-211ENST00000487698 PRPF19Q9UMS4 504 aaKnown RBP9.13□□□□□ -0.95
SF3B1-211ENST00000487698 TDRKHQ9Y2W6 561 aaKnown RBP9.13□□□□□ -0.95
SF3B1-211ENST00000487698 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.13□□□□□ -0.95
SF3B1-211ENST00000487698 DYRK1BQ9Y463 629 aa9.13□□□□□ -0.95
SF3B1-211ENST00000487698 CROCCQ5TZA2 2017 aa9.12□□□□□ -0.95
SF3B1-211ENST00000487698 TP53BP1Q12888 1972 aaPredicted RBP9.12□□□□□ -0.95
SF3B1-211ENST00000487698 A0A1W2PPV9 198 aa9.12□□□□□ -0.95
SF3B1-211ENST00000487698 FAM234BA2RU67 622 aa9.12□□□□□ -0.95
SF3B1-211ENST00000487698 ASPDHA6ND91 283 aa9.12□□□□□ -0.95
SF3B1-211ENST00000487698 C9JVG2 144 aa9.12□□□□□ -0.95
SF3B1-211ENST00000487698 MRASO14807 208 aa9.12□□□□□ -0.95
SF3B1-211ENST00000487698 SEC22BO75396 215 aa9.12□□□□□ -0.95
SF3B1-211ENST00000487698 HSD3B1P14060 373 aa9.12□□□□□ -0.95
SF3B1-211ENST00000487698 ACPPP15309 386 aa9.12□□□□□ -0.95
SF3B1-211ENST00000487698 HSD3B2P26439 372 aa9.12□□□□□ -0.95
SF3B1-211ENST00000487698 DPP6P42658 865 aa9.12□□□□□ -0.95
SF3B1-211ENST00000487698 RABIFP47224 123 aa9.12□□□□□ -0.95
SF3B1-211ENST00000487698 THOP1P52888 689 aa9.12□□□□□ -0.95
SF3B1-211ENST00000487698 MTTPP55157 894 aa9.12□□□□□ -0.95
SF3B1-211ENST00000487698 ALG11Q2TAA5 492 aa9.12□□□□□ -0.95
SF3B1-211ENST00000487698 CATSPEREQ5SY80 951 aa9.12□□□□□ -0.95
SF3B1-211ENST00000487698 WASH2PQ6VEQ5 465 aa9.12□□□□□ -0.95
SF3B1-211ENST00000487698 Q6ZSR6 202 aa9.12□□□□□ -0.95
SF3B1-211ENST00000487698 NET1Q7Z628 596 aaPredicted RBP9.12□□□□□ -0.95
SF3B1-211ENST00000487698 FAM160A2Q8N612 972 aaPredicted RBP9.12□□□□□ -0.95
SF3B1-211ENST00000487698 LINC01555Q8NAE3 123 aa9.12□□□□□ -0.95
SF3B1-211ENST00000487698 OR13H1Q8NG92 308 aa9.12□□□□□ -0.95
SF3B1-211ENST00000487698 OR7G3Q8NG95 312 aa9.12□□□□□ -0.95
SF3B1-211ENST00000487698 CMTM7Q96FZ5 175 aa9.12□□□□□ -0.95
SF3B1-211ENST00000487698 FCRL1Q96LA6 429 aa9.12□□□□□ -0.95
SF3B1-211ENST00000487698 CAMK1GQ96NX5 476 aa9.12□□□□□ -0.95
SF3B1-211ENST00000487698 EFCAB11Q9BUY7 163 aa9.12□□□□□ -0.95
SF3B1-211ENST00000487698 MVB12BQ9H7P6 319 aa9.12□□□□□ -0.95
SF3B1-211ENST00000487698 TBC1D17Q9HA65 648 aa9.12□□□□□ -0.95
SF3B1-211ENST00000487698 WASH6PQ9NQA3 447 aa9.12□□□□□ -0.95
SF3B1-211ENST00000487698 PRDM8Q9NQV8 689 aa9.12□□□□□ -0.95
SF3B1-211ENST00000487698 GEMIN8Q9NWZ8 242 aaKnown RBP9.12□□□□□ -0.95
SF3B1-211ENST00000487698 SCHIP1Q9P0W5 487 aaPredicted RBP9.12□□□□□ -0.95
SF3B1-211ENST00000487698 PCDHGA7Q9Y5G6 932 aa9.12□□□□□ -0.95
SF3B1-211ENST00000487698 PCDHGA11Q9Y5H2 935 aa9.12□□□□□ -0.95
SF3B1-211ENST00000487698 DGKBQ9Y6T7 804 aa9.12□□□□□ -0.95
SF3B1-211ENST00000487698 A0A1W2PP18 115 aa9.11□□□□□ -0.95
SF3B1-211ENST00000487698 A0A1W2PPC4 97 aa9.11□□□□□ -0.95
SF3B1-211ENST00000487698 A6NCN8 305 aa9.11□□□□□ -0.95
SF3B1-211ENST00000487698 OR52A4PA6NMU1 304 aa9.11□□□□□ -0.95
SF3B1-211ENST00000487698 ZNF839A8K0R7 811 aa9.11□□□□□ -0.95
SF3B1-211ENST00000487698 PDZK1P1A8MUH7 402 aa9.11□□□□□ -0.95
SF3B1-211ENST00000487698 SCAMP1O15126 338 aa9.11□□□□□ -0.95
SF3B1-211ENST00000487698 C1GALT1C1LP0DN25 315 aa9.11□□□□□ -0.95
SF3B1-211ENST00000487698 MTHFD1P11586 935 aaKnown RBP9.11□□□□□ -0.95
SF3B1-211ENST00000487698 PKLRP30613 574 aa9.11□□□□□ -0.95
SF3B1-211ENST00000487698 POLR2JP52435 117 aaKnown RBP9.11□□□□□ -0.95
SF3B1-211ENST00000487698 SRP54P61011 504 aaKnown RBP9.11□□□□□ -0.95
SF3B1-211ENST00000487698 ART3Q13508 389 aa9.11□□□□□ -0.95
SF3B1-211ENST00000487698 RPE65Q16518 533 aa9.11□□□□□ -0.95
SF3B1-211ENST00000487698 MMEL1Q495T6 779 aa9.11□□□□□ -0.95
SF3B1-211ENST00000487698 VPS26BQ4G0F5 336 aa9.11□□□□□ -0.95
SF3B1-211ENST00000487698 USP39Q53GS9 565 aaKnown RBP9.11□□□□□ -0.95
SF3B1-211ENST00000487698 C10orf62Q5T681 223 aaPredicted RBP9.11□□□□□ -0.95
SF3B1-211ENST00000487698 ADNP2Q6IQ32 1131 aa9.11□□□□□ -0.95
SF3B1-211ENST00000487698 NXPE4Q6UWF7 544 aa9.11□□□□□ -0.95
SF3B1-211ENST00000487698 ABRAXAS1Q6UWZ7 409 aa9.11□□□□□ -0.95
SF3B1-211ENST00000487698 BNC2Q6ZN30 1099 aaPredicted RBP9.11□□□□□ -0.95
SF3B1-211ENST00000487698 LAS2Q8IYD9 372 aa9.11□□□□□ -0.95
SF3B1-211ENST00000487698 UBALD2Q8IYN6 164 aa9.11□□□□□ -0.95
SF3B1-211ENST00000487698 GJD3Q8N144 294 aa9.11□□□□□ -0.95
SF3B1-211ENST00000487698 SPEM1Q8N4L4 309 aa9.11□□□□□ -0.95
SF3B1-211ENST00000487698 PJA1Q8NG27 643 aa9.11□□□□□ -0.95
SF3B1-211ENST00000487698 MAFAQ8NHW3 353 aaPredicted RBP9.11□□□□□ -0.95
SF3B1-211ENST00000487698 RLN3Q8WXF3 142 aa9.11□□□□□ -0.95
SF3B1-211ENST00000487698 SMPDL3AQ92484 453 aa9.11□□□□□ -0.95
SF3B1-211ENST00000487698 TSACCQ96A04 125 aaPredicted RBP9.11□□□□□ -0.95
SF3B1-211ENST00000487698 ROPN1LQ96C74 230 aa9.11□□□□□ -0.95
SF3B1-211ENST00000487698 SPDL1Q96EA4 605 aa9.11□□□□□ -0.95
SF3B1-211ENST00000487698 C11orf24Q96F05 449 aaPredicted RBP9.11□□□□□ -0.95
SF3B1-211ENST00000487698 FERD3LQ96RJ6 166 aa9.11□□□□□ -0.95
SF3B1-211ENST00000487698 HAUS8Q9BT25 410 aa9.11□□□□□ -0.95
SF3B1-211ENST00000487698 SPNS1Q9H2V7 528 aa9.11□□□□□ -0.95
SF3B1-211ENST00000487698 BRF2Q9HAW0 419 aa9.11□□□□□ -0.95
SF3B1-211ENST00000487698 IMP3Q9NV31 184 aaKnown RBP9.11□□□□□ -0.95
SF3B1-211ENST00000487698 TRNAU1APQ9NX07 287 aaKnown RBP9.11□□□□□ -0.95
SF3B1-211ENST00000487698 MAP10Q9P2G4 905 aa9.11□□□□□ -0.95
SF3B1-211ENST00000487698 TBC1D29Q9UFV1 150 aa9.11□□□□□ -0.95
SF3B1-211ENST00000487698 EIF3LQ9Y262 564 aaKnown RBP9.11□□□□□ -0.95
SF3B1-211ENST00000487698 NDUFAF1Q9Y375 327 aa9.11□□□□□ -0.95
SF3B1-211ENST00000487698 TMED5Q9Y3A6 229 aa9.11□□□□□ -0.95
SF3B1-211ENST00000487698 TSC22D4Q9Y3Q8 395 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms