RNA–Protein interactions for RNA: ENST00000487539.1

CNN3-206, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 739 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-206ENST00000487539 METTL25Q8N6Q8 603 aa4.28□□□□□ -1.72
CNN3-206ENST00000487539 RNF152Q8N8N0 203 aa4.28□□□□□ -1.72
CNN3-206ENST00000487539 WFDC11Q8NEX6 87 aa4.28□□□□□ -1.72
CNN3-206ENST00000487539 ABHD5Q8WTS1 349 aa4.28□□□□□ -1.72
CNN3-206ENST00000487539 CT55Q8WUE5 264 aa4.28□□□□□ -1.72
CNN3-206ENST00000487539 HDAC11Q96DB2 347 aa4.28□□□□□ -1.72
CNN3-206ENST00000487539 LRRC46Q96FV0 321 aa4.28□□□□□ -1.72
CNN3-206ENST00000487539 ANKRD36BP1Q96IX9 119 aa4.28□□□□□ -1.72
CNN3-206ENST00000487539 FOXC2Q99958 501 aa4.28□□□□□ -1.72
CNN3-206ENST00000487539 FAM118BQ9BPY3 351 aa4.28□□□□□ -1.72
CNN3-206ENST00000487539 TIPINQ9BVW5 301 aa4.28□□□□□ -1.72
CNN3-206ENST00000487539 CINPQ9BW66 212 aaPredicted RBP4.28□□□□□ -1.72
CNN3-206ENST00000487539 STRA6Q9BX79 667 aa4.28□□□□□ -1.72
CNN3-206ENST00000487539 C1QTNF7Q9BXJ2 289 aa4.28□□□□□ -1.72
CNN3-206ENST00000487539 RWDD1Q9H446 243 aaPredicted RBP4.28□□□□□ -1.72
CNN3-206ENST00000487539 CHST11Q9NPF2 352 aa4.28□□□□□ -1.72
CNN3-206ENST00000487539 SPATS2LQ9NUQ6 558 aaKnown RBP4.28□□□□□ -1.72
CNN3-206ENST00000487539 AKAP7Q9P0M2 348 aaPredicted RBP4.28□□□□□ -1.72
CNN3-206ENST00000487539 TBC1D7Q9P0N9 293 aa4.28□□□□□ -1.72
CNN3-206ENST00000487539 LARSQ9P2J5 1176 aaKnown RBP4.28□□□□□ -1.72
CNN3-206ENST00000487539 MYO1AQ9UBC5 1043 aa4.28□□□□□ -1.72
CNN3-206ENST00000487539 ORC3Q9UBD5 711 aaPredicted RBP4.28□□□□□ -1.72
CNN3-206ENST00000487539 LPAR3Q9UBY5 353 aa4.28□□□□□ -1.72
CNN3-206ENST00000487539 RYR3Q15413 4870 aa4.28□□□□□ -1.72
CNN3-206ENST00000487539 NOTCH1P46531 2555 aa4.27□□□□□ -1.73
CNN3-206ENST00000487539 ATP8B3O60423 1300 aa4.27□□□□□ -1.73
CNN3-206ENST00000487539 H0YCG3 227 aa4.27□□□□□ -1.73
CNN3-206ENST00000487539 TULP2O00295 520 aa4.27□□□□□ -1.73
CNN3-206ENST00000487539 DSCR3O14972 297 aa4.27□□□□□ -1.73
CNN3-206ENST00000487539 SMAD6O43541 496 aaKnown RBP4.27□□□□□ -1.73
CNN3-206ENST00000487539 ACSL4O60488 711 aa4.27□□□□□ -1.73
CNN3-206ENST00000487539 LRCH4O75427 683 aa4.27□□□□□ -1.73
CNN3-206ENST00000487539 WDR47O94967 919 aa4.27□□□□□ -1.73
CNN3-206ENST00000487539 TNNC2P02585 160 aa4.27□□□□□ -1.73
CNN3-206ENST00000487539 HMGB1P09429 215 aaKnown RBP4.27□□□□□ -1.73
CNN3-206ENST00000487539 FAM200BP0CF97 657 aa4.27□□□□□ -1.73
CNN3-206ENST00000487539 CTSEP14091 401 aa4.27□□□□□ -1.73
CNN3-206ENST00000487539 YWHAGP61981 247 aaKnown RBP eCLIP4.27□□□□□ -1.73
CNN3-206ENST00000487539 RPS21P63220 83 aaKnown RBP4.27□□□□□ -1.73
CNN3-206ENST00000487539 TNNC1P63316 161 aa4.27□□□□□ -1.73
CNN3-206ENST00000487539 CSNK1G2P78368 415 aa4.27□□□□□ -1.73
CNN3-206ENST00000487539 SSBP2P81877 361 aaPredicted RBP4.27□□□□□ -1.73
CNN3-206ENST00000487539 ADORA2A-AS1P86434 159 aa4.27□□□□□ -1.73
CNN3-206ENST00000487539 GPS1Q13098 491 aa4.27□□□□□ -1.73
CNN3-206ENST00000487539 DNASE1L3Q13609 305 aa4.27□□□□□ -1.73
CNN3-206ENST00000487539 LAMB3Q13751 1172 aa4.27□□□□□ -1.73
CNN3-206ENST00000487539 ELOCQ15369 112 aa4.27□□□□□ -1.73
CNN3-206ENST00000487539 LRRC73Q5JTD7 316 aa4.27□□□□□ -1.73
CNN3-206ENST00000487539 KLHDC7AQ5VTJ3 777 aa4.27□□□□□ -1.73
CNN3-206ENST00000487539 SPECC1LQ69YQ0 1117 aa4.27□□□□□ -1.73
CNN3-206ENST00000487539 LVRNQ6Q4G3 990 aa4.27□□□□□ -1.73
CNN3-206ENST00000487539 ENPP7Q6UWV6 458 aa4.27□□□□□ -1.73
CNN3-206ENST00000487539 MACC1Q6ZN28 852 aa4.27□□□□□ -1.73
CNN3-206ENST00000487539 ZNF720Q7Z2F6 126 aa4.27□□□□□ -1.73
CNN3-206ENST00000487539 TAF8Q7Z7C8 310 aa4.27□□□□□ -1.73
CNN3-206ENST00000487539 BIVMQ86UB2 503 aa4.27□□□□□ -1.73
CNN3-206ENST00000487539 SLC47A2Q86VL8 602 aa4.27□□□□□ -1.73
CNN3-206ENST00000487539 P3H2Q8IVL5 708 aa4.27□□□□□ -1.73
CNN3-206ENST00000487539 CEP97Q8IW35 865 aa4.27□□□□□ -1.73
CNN3-206ENST00000487539 CCDC117Q8IWD4 279 aaPredicted RBP4.27□□□□□ -1.73
CNN3-206ENST00000487539 FAM186BQ8IYM0 893 aa4.27□□□□□ -1.73
CNN3-206ENST00000487539 CRYBG2Q8N1P7 616 aa4.27□□□□□ -1.73
CNN3-206ENST00000487539 ESX1Q8N693 406 aa4.27□□□□□ -1.73
CNN3-206ENST00000487539 FAM71DQ8N9W8 422 aa4.27□□□□□ -1.73
CNN3-206ENST00000487539 OR2A12Q8NGT7 310 aa4.27□□□□□ -1.73
CNN3-206ENST00000487539 SUN3Q8TAQ9 357 aa4.27□□□□□ -1.73
CNN3-206ENST00000487539 GRHL3Q8TE85 626 aa4.27□□□□□ -1.73
CNN3-206ENST00000487539 OR1E3Q8WZA6 343 aa4.27□□□□□ -1.73
CNN3-206ENST00000487539 ALG14Q96F25 216 aa4.27□□□□□ -1.73
CNN3-206ENST00000487539 ZNF274Q96GC6 653 aaPredicted RBP4.27□□□□□ -1.73
CNN3-206ENST00000487539 PDXPQ96GD0 296 aa4.27□□□□□ -1.73
CNN3-206ENST00000487539 ELMO2Q96JJ3 720 aa4.27□□□□□ -1.73
CNN3-206ENST00000487539 TBATAQ96M53 351 aa4.27□□□□□ -1.73
CNN3-206ENST00000487539 TBCBQ99426 244 aa4.27□□□□□ -1.73
CNN3-206ENST00000487539 ZSCAN16Q9H4T2 348 aaPredicted RBP4.27□□□□□ -1.73
CNN3-206ENST00000487539 ACTL8Q9H568 366 aa4.27□□□□□ -1.73
CNN3-206ENST00000487539 PARVGQ9HBI0 331 aa4.27□□□□□ -1.73
CNN3-206ENST00000487539 FGF21Q9NSA1 209 aa4.27□□□□□ -1.73
CNN3-206ENST00000487539 BLOC1S4Q9NUP1 217 aa4.27□□□□□ -1.73
CNN3-206ENST00000487539 CHD5Q8TDI0 1954 aa4.27□□□□□ -1.73
CNN3-206ENST00000487539 NCOA6Q14686 2063 aaPredicted RBP4.26□□□□□ -1.73
CNN3-206ENST00000487539 IGHV1OR21-1A0A087WYE8 117 aa4.26□□□□□ -1.73
CNN3-206ENST00000487539 A0A1B0GUH1 482 aa4.26□□□□□ -1.73
CNN3-206ENST00000487539 WDR91A4D1P6 747 aa4.26□□□□□ -1.73
CNN3-206ENST00000487539 INAFM1C9JVW0 142 aa4.26□□□□□ -1.73
CNN3-206ENST00000487539 CLIC2O15247 247 aa4.26□□□□□ -1.73
CNN3-206ENST00000487539 INPP4BO15327 924 aa4.26□□□□□ -1.73
CNN3-206ENST00000487539 NUDT21O43809 227 aaKnown RBP4.26□□□□□ -1.73
CNN3-206ENST00000487539 SNAP91O60641 907 aa4.26□□□□□ -1.73
CNN3-206ENST00000487539 KIAA0754O94854 1291 aa4.26□□□□□ -1.73
CNN3-206ENST00000487539 FGF1P05230 155 aa4.26□□□□□ -1.73
CNN3-206ENST00000487539 MYL1P05976 194 aa4.26□□□□□ -1.73
CNN3-206ENST00000487539 ALPIP09923 528 aa4.26□□□□□ -1.73
CNN3-206ENST00000487539 CBSLP0DN79 551 aa4.26□□□□□ -1.73
CNN3-206ENST00000487539 ADRB3P13945 408 aa4.26□□□□□ -1.73
CNN3-206ENST00000487539 HTR7P34969 479 aa4.26□□□□□ -1.73
CNN3-206ENST00000487539 CBSP35520 551 aa4.26□□□□□ -1.73
CNN3-206ENST00000487539 CASP4P49662 377 aa4.26□□□□□ -1.73
CNN3-206ENST00000487539 SRP54P61011 504 aaKnown RBP4.26□□□□□ -1.73
CNN3-206ENST00000487539 CCDC15Q0P6D6 951 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms