RNA–Protein interactions for RNA: ENST00000487386.1

LINC00888-204, long intergenic non-protein coding RNA 888, humanhuman

BASIC

Gene LINC00888, Length 421 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-204ENST00000487386 PRPF39Q86UA1 669 aaKnown RBP3.57□□□□□ -1.84
LINC00888-204ENST00000487386 TC2NQ8N9U0 490 aa3.57□□□□□ -1.84
LINC00888-204ENST00000487386 THAP8Q8NA92 274 aa3.57□□□□□ -1.84
LINC00888-204ENST00000487386 AZIN2Q96A70 460 aa3.57□□□□□ -1.84
LINC00888-204ENST00000487386 ZNF689Q96CS4 500 aaPredicted RBP3.57□□□□□ -1.84
LINC00888-204ENST00000487386 C10orf90Q96M02 699 aa3.57□□□□□ -1.84
LINC00888-204ENST00000487386 SEPHS2Q99611 448 aa3.57□□□□□ -1.84
LINC00888-204ENST00000487386 SYT15Q9BQS2 421 aa3.57□□□□□ -1.84
LINC00888-204ENST00000487386 URM1Q9BTM9 101 aaKnown RBP3.57□□□□□ -1.84
LINC00888-204ENST00000487386 APOL6Q9BWW8 343 aa3.57□□□□□ -1.84
LINC00888-204ENST00000487386 FGFBP2Q9BYJ0 223 aa3.57□□□□□ -1.84
LINC00888-204ENST00000487386 ERAP1Q9NZ08 941 aa3.57□□□□□ -1.84
LINC00888-204ENST00000487386 STK26Q9P289 416 aa3.57□□□□□ -1.84
LINC00888-204ENST00000487386 EIF2AK4Q9P2K8 1649 aaKnown RBP3.57□□□□□ -1.84
LINC00888-204ENST00000487386 GPATCH8Q9UKJ3 1502 aaKnown RBP3.57□□□□□ -1.84
LINC00888-204ENST00000487386 STUB1Q9UNE7 303 aa3.57□□□□□ -1.84
LINC00888-204ENST00000487386 MMP24Q9Y5R2 645 aa3.57□□□□□ -1.84
LINC00888-204ENST00000487386 FAM169AQ9Y6X4 670 aa3.57□□□□□ -1.84
LINC00888-204ENST00000487386 RICTORQ6R327 1708 aa3.56□□□□□ -1.84
LINC00888-204ENST00000487386 KDM5CP41229 1560 aa3.56□□□□□ -1.84
LINC00888-204ENST00000487386 HFM1A2PYH4 1435 aa3.56□□□□□ -1.84
LINC00888-204ENST00000487386 A0A0J9YWU9 116 aa3.56□□□□□ -1.84
LINC00888-204ENST00000487386 TRIM77I1YAP6 450 aa3.56□□□□□ -1.84
LINC00888-204ENST00000487386 CDK2AP2O75956 126 aa3.56□□□□□ -1.84
LINC00888-204ENST00000487386 DDHD2O94830 711 aa3.56□□□□□ -1.84
LINC00888-204ENST00000487386 TRUB2O95900 331 aaKnown RBP3.56□□□□□ -1.84
LINC00888-204ENST00000487386 ADRB2P07550 413 aa3.56□□□□□ -1.84
LINC00888-204ENST00000487386 CDH3P22223 829 aa3.56□□□□□ -1.84
LINC00888-204ENST00000487386 PTGER4P35408 488 aa3.56□□□□□ -1.84
LINC00888-204ENST00000487386 LEPRP48357 1165 aaKnown RBP3.56□□□□□ -1.84
LINC00888-204ENST00000487386 CCR3P51677 355 aa3.56□□□□□ -1.84
LINC00888-204ENST00000487386 MAPK12P53778 367 aa3.56□□□□□ -1.84
LINC00888-204ENST00000487386 GCNT1Q02742 428 aa3.56□□□□□ -1.84
LINC00888-204ENST00000487386 SNTB1Q13884 538 aaKnown RBP3.56□□□□□ -1.84
LINC00888-204ENST00000487386 LPAL2Q16609 132 aa3.56□□□□□ -1.84
LINC00888-204ENST00000487386 SLC25A47Q6Q0C1 308 aa3.56□□□□□ -1.84
LINC00888-204ENST00000487386 ENOSF1Q7L5Y1 443 aa3.56□□□□□ -1.84
LINC00888-204ENST00000487386 ARHGAP22Q7Z5H3 698 aa3.56□□□□□ -1.84
LINC00888-204ENST00000487386 ZNF440Q8IYI8 595 aa3.56□□□□□ -1.84
LINC00888-204ENST00000487386 CDK20Q8IZL9 346 aa3.56□□□□□ -1.84
LINC00888-204ENST00000487386 NIPA2Q8N8Q9 360 aa3.56□□□□□ -1.84
LINC00888-204ENST00000487386 BMPERQ8N8U9 685 aa3.56□□□□□ -1.84
LINC00888-204ENST00000487386 OR10G8Q8NGN5 311 aa3.56□□□□□ -1.84
LINC00888-204ENST00000487386 PIGBQ92521 554 aa3.56□□□□□ -1.84
LINC00888-204ENST00000487386 SYN2Q92777 582 aaPredicted RBP3.56□□□□□ -1.84
LINC00888-204ENST00000487386 ATOH8Q96SQ7 321 aa3.56□□□□□ -1.84
LINC00888-204ENST00000487386 KRT12Q99456 494 aa3.56□□□□□ -1.84
LINC00888-204ENST00000487386 NUDT16L1Q9BRJ7 211 aaKnown RBP3.56□□□□□ -1.84
LINC00888-204ENST00000487386 CLEC7AQ9BXN2 247 aa3.56□□□□□ -1.84
LINC00888-204ENST00000487386 TRIM15Q9C019 465 aa3.56□□□□□ -1.84
LINC00888-204ENST00000487386 THAP2Q9H0W7 228 aa3.56□□□□□ -1.84
LINC00888-204ENST00000487386 PIH1D3Q9NQM4 214 aaKnown RBP3.56□□□□□ -1.84
LINC00888-204ENST00000487386 EPHA6Q9UF33 1036 aa3.56□□□□□ -1.84
LINC00888-204ENST00000487386 WDR37Q9Y2I8 494 aa3.56□□□□□ -1.84
LINC00888-204ENST00000487386 TRPV2Q9Y5S1 764 aa3.56□□□□□ -1.84
LINC00888-204ENST00000487386 GLI2P10070 1586 aa3.55□□□□□ -1.84
LINC00888-204ENST00000487386 NOTCH3Q9UM47 2321 aa3.55□□□□□ -1.84
LINC00888-204ENST00000487386 POGZQ7Z3K3 1410 aa3.55□□□□□ -1.84
LINC00888-204ENST00000487386 IGLV7-46A0A075B6I9 117 aa3.55□□□□□ -1.84
LINC00888-204ENST00000487386 SPRY1O43609 319 aaPredicted RBP3.55□□□□□ -1.84
LINC00888-204ENST00000487386 SORBS2O94875 1100 aaKnown RBP3.55□□□□□ -1.84
LINC00888-204ENST00000487386 MOCS3O95396 460 aa3.55□□□□□ -1.84
LINC00888-204ENST00000487386 GP1BBP13224 206 aa3.55□□□□□ -1.84
LINC00888-204ENST00000487386 IL11P20809 199 aa3.55□□□□□ -1.84
LINC00888-204ENST00000487386 RPL21P46778 160 aaKnown RBP3.55□□□□□ -1.84
LINC00888-204ENST00000487386 ALDH3A2P51648 485 aa3.55□□□□□ -1.84
LINC00888-204ENST00000487386 ALCAMQ13740 583 aa3.55□□□□□ -1.84
LINC00888-204ENST00000487386 PTPRCAPQ14761 206 aa3.55□□□□□ -1.84
LINC00888-204ENST00000487386 SGSM1Q2NKQ1 1148 aa3.55□□□□□ -1.84
LINC00888-204ENST00000487386 VWC2Q2TAL6 325 aa3.55□□□□□ -1.84
LINC00888-204ENST00000487386 SLC35D3Q5M8T2 416 aa3.55□□□□□ -1.84
LINC00888-204ENST00000487386 TRIM65Q6PJ69 517 aa3.55□□□□□ -1.84
LINC00888-204ENST00000487386 FIP1L1Q6UN15 594 aaKnown RBP3.55□□□□□ -1.84
LINC00888-204ENST00000487386 TMEM207Q6UWW9 146 aa3.55□□□□□ -1.84
LINC00888-204ENST00000487386 Q6ZRP5 223 aa3.55□□□□□ -1.84
LINC00888-204ENST00000487386 BTN2A1Q7KYR7 527 aa3.55□□□□□ -1.84
LINC00888-204ENST00000487386 HOGA1Q86XE5 327 aa3.55□□□□□ -1.84
LINC00888-204ENST00000487386 RAB42Q8N4Z0 105 aa3.55□□□□□ -1.84
LINC00888-204ENST00000487386 OR1L3Q8NH93 324 aa3.55□□□□□ -1.84
LINC00888-204ENST00000487386 TEKT4Q8WW24 435 aa3.55□□□□□ -1.84
LINC00888-204ENST00000487386 ZNRF4Q8WWF5 429 aa3.55□□□□□ -1.84
LINC00888-204ENST00000487386 RBM4BQ9BQ04 359 aaKnown RBP3.55□□□□□ -1.84
LINC00888-204ENST00000487386 PIGQQ9BRB3 760 aa3.55□□□□□ -1.84
LINC00888-204ENST00000487386 TLE6Q9H808 572 aa3.55□□□□□ -1.84
LINC00888-204ENST00000487386 Q9H8V8 135 aa3.55□□□□□ -1.84
LINC00888-204ENST00000487386 CNOT10Q9H9A5 744 aaKnown RBP3.55□□□□□ -1.84
LINC00888-204ENST00000487386 FAM207AQ9NSI2 230 aaPredicted RBP3.55□□□□□ -1.84
LINC00888-204ENST00000487386 OR6C2Q9NZP2 312 aa3.55□□□□□ -1.84
LINC00888-204ENST00000487386 PAK5Q9P286 719 aa3.55□□□□□ -1.84
LINC00888-204ENST00000487386 CEP152O94986 1710 aa3.55□□□□□ -1.84
LINC00888-204ENST00000487386 ZC3H13Q5T200 1668 aaKnown RBP3.55□□□□□ -1.84
LINC00888-204ENST00000487386 DEPDC5O75140 1603 aa3.55□□□□□ -1.84
LINC00888-204ENST00000487386 IQGAP3Q86VI3 1631 aa3.55□□□□□ -1.84
LINC00888-204ENST00000487386 DIP2CQ9Y2E4 1556 aa3.55□□□□□ -1.84
LINC00888-204ENST00000487386 PRDM15P57071 1507 aaPredicted RBP3.54□□□□□ -1.84
LINC00888-204ENST00000487386 ZMYM4Q5VZL5 1548 aa3.54□□□□□ -1.84
LINC00888-204ENST00000487386 KDM5DQ9BY66 1539 aa3.54□□□□□ -1.84
LINC00888-204ENST00000487386 FAM135AQ9P2D6 1515 aa3.54□□□□□ -1.84
LINC00888-204ENST00000487386 COL2A1P02458 1487 aaPredicted RBP3.54□□□□□ -1.84
LINC00888-204ENST00000487386 ZNF518AQ6AHZ1 1483 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms