RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 PRTGQ2VWP7 1150 aa14.6□□□□□ -0.07
MCF2L-228ENST00000487354 FAM214AQ32MH5 1076 aa14.6□□□□□ -0.07
MCF2L-228ENST00000487354 C11orf63Q6NUN7 778 aa14.6□□□□□ -0.07
MCF2L-228ENST00000487354 PRMT9Q6P2P2 845 aa14.6□□□□□ -0.07
MCF2L-228ENST00000487354 CNSTQ6PJW8 725 aa14.6□□□□□ -0.07
MCF2L-228ENST00000487354 UNC5DQ6UXZ4 953 aa14.6□□□□□ -0.07
MCF2L-228ENST00000487354 ZNF534Q76KX8 674 aa14.6□□□□□ -0.07
MCF2L-228ENST00000487354 CDH24Q86UP0 819 aa14.6□□□□□ -0.07
MCF2L-228ENST00000487354 SHISA5Q8N114 240 aa14.6□□□□□ -0.07
MCF2L-228ENST00000487354 ZUFSPQ96AP4 578 aa14.6□□□□□ -0.07
MCF2L-228ENST00000487354 SLC22A18Q96BI1 424 aa14.6□□□□□ -0.07
MCF2L-228ENST00000487354 C14orf79Q96F83 325 aa14.6□□□□□ -0.07
MCF2L-228ENST00000487354 INTS7Q9NVH2 962 aaKnown RBP14.6□□□□□ -0.07
MCF2L-228ENST00000487354 SPG11Q96JI7 2443 aa14.59□□□□□ -0.07
MCF2L-228ENST00000487354 A0A0J9YVX5 310 aa14.59□□□□□ -0.07
MCF2L-228ENST00000487354 KDM1AO60341 852 aa14.59□□□□□ -0.07
MCF2L-228ENST00000487354 SRPX2O60687 465 aaPredicted RBP14.59□□□□□ -0.07
MCF2L-228ENST00000487354 PRAMEF2O60811 474 aa14.59□□□□□ -0.07
MCF2L-228ENST00000487354 MFAP3LO75121 409 aa14.59□□□□□ -0.07
MCF2L-228ENST00000487354 CRYABP02511 175 aaKnown RBP14.59□□□□□ -0.07
MCF2L-228ENST00000487354 FBLP22087 321 aaKnown RBP14.59□□□□□ -0.07
MCF2L-228ENST00000487354 PTPN7P35236 360 aa14.59□□□□□ -0.07
MCF2L-228ENST00000487354 HSPA14Q0VDF9 509 aa14.59□□□□□ -0.07
MCF2L-228ENST00000487354 CCDC38Q502W7 563 aa14.59□□□□□ -0.07
MCF2L-228ENST00000487354 AADACL2Q6P093 401 aa14.59□□□□□ -0.07
MCF2L-228ENST00000487354 Q6ZPB1 254 aaPredicted RBP14.59□□□□□ -0.07
MCF2L-228ENST00000487354 RIPOR1Q6ZS17 1223 aa14.59□□□□□ -0.07
MCF2L-228ENST00000487354 OR2L3Q8NG85 312 aa14.59□□□□□ -0.07
MCF2L-228ENST00000487354 OR2A1Q8NGT9 310 aa14.59□□□□□ -0.07
MCF2L-228ENST00000487354 CFAP61Q8NHU2 1237 aa14.59□□□□□ -0.07
MCF2L-228ENST00000487354 MTFMTQ96DP5 389 aaKnown RBP14.59□□□□□ -0.07
MCF2L-228ENST00000487354 IMMP1LQ96LU5 166 aa14.59□□□□□ -0.07
MCF2L-228ENST00000487354 CCDC42Q96M95 316 aa14.59□□□□□ -0.07
MCF2L-228ENST00000487354 TREX2Q9BQ50 279 aaPredicted RBP14.59□□□□□ -0.07
MCF2L-228ENST00000487354 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.59□□□□□ -0.07
MCF2L-228ENST00000487354 ZNF700Q9H0M5 742 aa14.59□□□□□ -0.07
MCF2L-228ENST00000487354 SLC2A6Q9UGQ3 507 aa14.59□□□□□ -0.07
MCF2L-228ENST00000487354 ZC3H7BQ9UGR2 993 aaKnown RBP14.59□□□□□ -0.07
MCF2L-228ENST00000487354 NAV3Q8IVL0 2385 aa14.59□□□□□ -0.07
MCF2L-228ENST00000487354 A0A0U1RQJ8 604 aa14.58□□□□□ -0.08
MCF2L-228ENST00000487354 SYCE3A1L190 88 aa14.58□□□□□ -0.08
MCF2L-228ENST00000487354 MACROD2A1Z1Q3 448 aa14.58□□□□□ -0.08
MCF2L-228ENST00000487354 OR2A25A4D2G3 310 aa14.58□□□□□ -0.08
MCF2L-228ENST00000487354 OR5H15A6NDH6 313 aa14.58□□□□□ -0.08
MCF2L-228ENST00000487354 SLCO2B1O94956 709 aa14.58□□□□□ -0.08
MCF2L-228ENST00000487354 FKBP9O95302 570 aa14.58□□□□□ -0.08
MCF2L-228ENST00000487354 AOAHP28039 575 aa14.58□□□□□ -0.08
MCF2L-228ENST00000487354 CTNNA1P35221 906 aaKnown RBP14.58□□□□□ -0.08
MCF2L-228ENST00000487354 BDKRB1P46663 353 aa14.58□□□□□ -0.08
MCF2L-228ENST00000487354 EMP2P54851 167 aa14.58□□□□□ -0.08
MCF2L-228ENST00000487354 TPM4P67936 248 aa14.58□□□□□ -0.08
MCF2L-228ENST00000487354 DSG2Q14126 1118 aa14.58□□□□□ -0.08
MCF2L-228ENST00000487354 FAAH2Q6GMR7 532 aa14.58□□□□□ -0.08
MCF2L-228ENST00000487354 DARS2Q6PI48 645 aaKnown RBP14.58□□□□□ -0.08
MCF2L-228ENST00000487354 TMEM205Q6UW68 189 aa14.58□□□□□ -0.08
MCF2L-228ENST00000487354 NEK10Q6ZWH5 1172 aa14.58□□□□□ -0.08
MCF2L-228ENST00000487354 CHERPQ8IWX8 916 aaKnown RBP14.58□□□□□ -0.08
MCF2L-228ENST00000487354 HMGCLL1Q8TB92 370 aa14.58□□□□□ -0.08
MCF2L-228ENST00000487354 PPP1R2P1Q96PQ5 205 aa14.58□□□□□ -0.08
MCF2L-228ENST00000487354 MIPEPQ99797 713 aa14.58□□□□□ -0.08
MCF2L-228ENST00000487354 OSBPL8Q9BZF1 889 aa14.58□□□□□ -0.08
MCF2L-228ENST00000487354 LRRC40Q9H9A6 602 aa14.58□□□□□ -0.08
MCF2L-228ENST00000487354 RIC8BQ9NVN3 520 aa14.58□□□□□ -0.08
MCF2L-228ENST00000487354 RUVBL2Q9Y230 463 aaKnown RBP14.58□□□□□ -0.08
MCF2L-228ENST00000487354 EFR3BQ9Y2G0 817 aa14.58□□□□□ -0.08
MCF2L-228ENST00000487354 NFS1Q9Y697 457 aa14.58□□□□□ -0.08
MCF2L-228ENST00000487354 FAM169AQ9Y6X4 670 aa14.58□□□□□ -0.08
MCF2L-228ENST00000487354 CLDN14O95500 239 aa14.57□□□□□ -0.08
MCF2L-228ENST00000487354 GOT2P00505 430 aaKnown RBP14.57□□□□□ -0.08
MCF2L-228ENST00000487354 SLC26A3P40879 764 aa14.57□□□□□ -0.08
MCF2L-228ENST00000487354 GDF10P55107 478 aa14.57□□□□□ -0.08
MCF2L-228ENST00000487354 COPS2P61201 443 aa14.57□□□□□ -0.08
MCF2L-228ENST00000487354 ACVR1Q04771 509 aa14.57□□□□□ -0.08
MCF2L-228ENST00000487354 TRIM14Q14142 442 aa14.57□□□□□ -0.08
MCF2L-228ENST00000487354 PARP6Q2NL67 630 aa14.57□□□□□ -0.08
MCF2L-228ENST00000487354 FBXO42Q6P3S6 717 aa14.57□□□□□ -0.08
MCF2L-228ENST00000487354 ZC3H7AQ8IWR0 971 aaKnown RBP14.57□□□□□ -0.08
MCF2L-228ENST00000487354 KRT222Q8N1A0 295 aa14.57□□□□□ -0.08
MCF2L-228ENST00000487354 ZNF778Q96MU6 729 aa14.57□□□□□ -0.08
MCF2L-228ENST00000487354 NPAS2Q99743 824 aa14.57□□□□□ -0.08
MCF2L-228ENST00000487354 SPOCK3Q9BQ16 436 aa14.57□□□□□ -0.08
MCF2L-228ENST00000487354 CARD6Q9BX69 1037 aa14.57□□□□□ -0.08
MCF2L-228ENST00000487354 HES7Q9BYE0 225 aa14.57□□□□□ -0.08
MCF2L-228ENST00000487354 TGIF2Q9GZN2 237 aa14.57□□□□□ -0.08
MCF2L-228ENST00000487354 ENKD1Q9H0I2 346 aa14.57□□□□□ -0.08
MCF2L-228ENST00000487354 R3HDM2Q9Y2K5 976 aaKnown RBP14.57□□□□□ -0.08
MCF2L-228ENST00000487354 MEMO1Q9Y316 297 aa14.57□□□□□ -0.08
MCF2L-228ENST00000487354 NIPBLQ6KC79 2804 aaeCLIP14.57□□□□□ -0.08
MCF2L-228ENST00000487354 IGKV1-8A0A0C4DH67 115 aa14.56□□□□□ -0.08
MCF2L-228ENST00000487354 H0YGG7 62 aa14.56□□□□□ -0.08
MCF2L-228ENST00000487354 ZNHIT1O43257 154 aa14.56□□□□□ -0.08
MCF2L-228ENST00000487354 FOXS1O43638 330 aa14.56□□□□□ -0.08
MCF2L-228ENST00000487354 WFS1O76024 890 aa14.56□□□□□ -0.08
MCF2L-228ENST00000487354 STK10O94804 968 aaKnown RBP14.56□□□□□ -0.08
MCF2L-228ENST00000487354 C1orf105O95561 183 aa14.56□□□□□ -0.08
MCF2L-228ENST00000487354 RPN2P04844 631 aa14.56□□□□□ -0.08
MCF2L-228ENST00000487354 EIF2S1P05198 315 aaKnown RBP14.56□□□□□ -0.08
MCF2L-228ENST00000487354 CAPN3P20807 821 aa14.56□□□□□ -0.08
MCF2L-228ENST00000487354 EMP3P54852 163 aa14.56□□□□□ -0.08
MCF2L-228ENST00000487354 ARF3P61204 181 aaPredicted RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms