RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 COLQQ9Y215 455 aaPredicted RBP11.26□□□□□ -0.61
PRKCB-207ENST00000486868 RUVBL1Q9Y265 456 aaKnown RBP11.26□□□□□ -0.61
PRKCB-207ENST00000486868 PCYT1BQ9Y5K3 369 aaPredicted RBP11.26□□□□□ -0.61
PRKCB-207ENST00000486868 LRRK1Q38SD2 2015 aa11.25□□□□□ -0.61
PRKCB-207ENST00000486868 E7EQ34 232 aa11.25□□□□□ -0.61
PRKCB-207ENST00000486868 FXYD1O00168 92 aa11.25□□□□□ -0.61
PRKCB-207ENST00000486868 ACOT8O14734 319 aa11.25□□□□□ -0.61
PRKCB-207ENST00000486868 NARSO43776 548 aaKnown RBP11.25□□□□□ -0.61
PRKCB-207ENST00000486868 ZNF217O75362 1048 aa11.25□□□□□ -0.61
PRKCB-207ENST00000486868 FUCA1P04066 466 aa11.25□□□□□ -0.61
PRKCB-207ENST00000486868 BCKDHAP12694 445 aa11.25□□□□□ -0.61
PRKCB-207ENST00000486868 CD22P20273 847 aa11.25□□□□□ -0.61
PRKCB-207ENST00000486868 CXCR2P25025 360 aa11.25□□□□□ -0.61
PRKCB-207ENST00000486868 NDUFS1P28331 727 aa11.25□□□□□ -0.61
PRKCB-207ENST00000486868 IL12AP29459 219 aa11.25□□□□□ -0.61
PRKCB-207ENST00000486868 DPP6P42658 865 aa11.25□□□□□ -0.61
PRKCB-207ENST00000486868 THOP1P52888 689 aa11.25□□□□□ -0.61
PRKCB-207ENST00000486868 EEFSECP57772 596 aaKnown RBP11.25□□□□□ -0.61
PRKCB-207ENST00000486868 STARD6P59095 220 aa11.25□□□□□ -0.61
PRKCB-207ENST00000486868 PPP2CBP62714 309 aa11.25□□□□□ -0.61
PRKCB-207ENST00000486868 PPP2CAP67775 309 aa11.25□□□□□ -0.61
PRKCB-207ENST00000486868 PHEXP78562 749 aa11.25□□□□□ -0.61
PRKCB-207ENST00000486868 HMGCS1Q01581 520 aa11.25□□□□□ -0.61
PRKCB-207ENST00000486868 SLC34A1Q06495 639 aa11.25□□□□□ -0.61
PRKCB-207ENST00000486868 BNIP2Q12982 314 aa11.25□□□□□ -0.61
PRKCB-207ENST00000486868 TRIM25Q14258 630 aaKnown RBP11.25□□□□□ -0.61
PRKCB-207ENST00000486868 UAP1L1Q3KQV9 507 aa11.25□□□□□ -0.61
PRKCB-207ENST00000486868 PRAMEF14Q5SWL7 426 aa11.25□□□□□ -0.61
PRKCB-207ENST00000486868 IER5LQ5T953 404 aa11.25□□□□□ -0.61
PRKCB-207ENST00000486868 PRAMEF13Q5VWM6 474 aa11.25□□□□□ -0.61
PRKCB-207ENST00000486868 GALNT18Q6P9A2 607 aa11.25□□□□□ -0.61
PRKCB-207ENST00000486868 ABRAXAS1Q6UWZ7 409 aa11.25□□□□□ -0.61
PRKCB-207ENST00000486868 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.25□□□□□ -0.615e-6■■■■■ 81.8
PRKCB-207ENST00000486868 KRT78Q8N1N4 520 aa11.25□□□□□ -0.61
PRKCB-207ENST00000486868 TMEM145Q8NBT3 493 aa11.25□□□□□ -0.61
PRKCB-207ENST00000486868 ABHD11Q8NFV4 315 aa11.25□□□□□ -0.61
PRKCB-207ENST00000486868 OR7G3Q8NG95 312 aa11.25□□□□□ -0.61
PRKCB-207ENST00000486868 NEIL2Q969S2 332 aa11.25□□□□□ -0.61
PRKCB-207ENST00000486868 MED8Q96G25 268 aa11.25□□□□□ -0.61
PRKCB-207ENST00000486868 DUS3LQ96G46 650 aaKnown RBP11.25□□□□□ -0.61
PRKCB-207ENST00000486868 SHDQ96IW2 340 aa11.25□□□□□ -0.61
PRKCB-207ENST00000486868 TEX37Q96LM6 180 aa11.25□□□□□ -0.61
PRKCB-207ENST00000486868 WDR92Q96MX6 357 aa11.25□□□□□ -0.61
PRKCB-207ENST00000486868 OR2M4Q96R27 311 aa11.25□□□□□ -0.61
PRKCB-207ENST00000486868 MENTQ9BUN1 341 aa11.25□□□□□ -0.61
PRKCB-207ENST00000486868 C1orf50Q9BV19 199 aa11.25□□□□□ -0.61
PRKCB-207ENST00000486868 PCED1AQ9H1Q7 454 aa11.25□□□□□ -0.61
PRKCB-207ENST00000486868 EBF2Q9HAK2 575 aa11.25□□□□□ -0.61
PRKCB-207ENST00000486868 S100A14Q9HCY8 104 aa11.25□□□□□ -0.61
PRKCB-207ENST00000486868 WNT16Q9UBV4 365 aa11.25□□□□□ -0.61
PRKCB-207ENST00000486868 SUFUQ9UMX1 484 aa11.25□□□□□ -0.61
PRKCB-207ENST00000486868 POLR3HQ9Y535 204 aaPredicted RBP11.25□□□□□ -0.61
PRKCB-207ENST00000486868 TRPM6Q9BX84 2022 aa11.25□□□□□ -0.61
PRKCB-207ENST00000486868 PRSS38A1L453 326 aa11.24□□□□□ -0.61
PRKCB-207ENST00000486868 PRAMEF26H0Y7S4 382 aa11.24□□□□□ -0.61
PRKCB-207ENST00000486868 SLC31A1O15431 190 aa11.24□□□□□ -0.61
PRKCB-207ENST00000486868 PDE5AO76074 875 aa11.24□□□□□ -0.61
PRKCB-207ENST00000486868 MYO1DO94832 1006 aa11.24□□□□□ -0.61
PRKCB-207ENST00000486868 SEMA4FO95754 770 aa11.24□□□□□ -0.61
PRKCB-207ENST00000486868 PRPS1L1P21108 318 aa11.24□□□□□ -0.61
PRKCB-207ENST00000486868 GSTM2P28161 218 aa11.24□□□□□ -0.61
PRKCB-207ENST00000486868 ACSL1P33121 698 aa11.24□□□□□ -0.61
PRKCB-207ENST00000486868 ASMTP46597 345 aa11.24□□□□□ -0.61
PRKCB-207ENST00000486868 RABIFP47224 123 aa11.24□□□□□ -0.61
PRKCB-207ENST00000486868 CCNIQ14094 377 aa11.24□□□□□ -0.61
PRKCB-207ENST00000486868 SKIV2LQ15477 1246 aaKnown RBP11.24□□□□□ -0.61
PRKCB-207ENST00000486868 PLA2G4EQ3MJ16 856 aa11.24□□□□□ -0.61
PRKCB-207ENST00000486868 SPIN4Q56A73 249 aa11.24□□□□□ -0.61
PRKCB-207ENST00000486868 SGO1Q5FBB7 561 aa11.24□□□□□ -0.61
PRKCB-207ENST00000486868 FAM219BQ5XKK7 198 aa11.24□□□□□ -0.61
PRKCB-207ENST00000486868 KIAA0895LQ68EN5 471 aa11.24□□□□□ -0.61
PRKCB-207ENST00000486868 ABI3BPQ7Z7G0 1075 aa11.24□□□□□ -0.61
PRKCB-207ENST00000486868 FAM129CQ86XR2 697 aa11.24□□□□□ -0.61
PRKCB-207ENST00000486868 TMEM126BQ8IUX1 230 aa11.24□□□□□ -0.61
PRKCB-207ENST00000486868 GJD3Q8N144 294 aa11.24□□□□□ -0.61
PRKCB-207ENST00000486868 LIX1Q8N485 282 aa11.24□□□□□ -0.61
PRKCB-207ENST00000486868 OR5AR1Q8NGP9 310 aa11.24□□□□□ -0.61
PRKCB-207ENST00000486868 ZFPM2Q8WW38 1151 aa11.24□□□□□ -0.61
PRKCB-207ENST00000486868 KLK6Q92876 244 aa11.24□□□□□ -0.61
PRKCB-207ENST00000486868 ZUFSPQ96AP4 578 aa11.24□□□□□ -0.61
PRKCB-207ENST00000486868 ERLEC1Q96DZ1 483 aa11.24□□□□□ -0.61
PRKCB-207ENST00000486868 BMFQ96LC9 184 aa11.24□□□□□ -0.61
PRKCB-207ENST00000486868 INSM2Q96T92 566 aaPredicted RBP11.24□□□□□ -0.61
PRKCB-207ENST00000486868 KIR3DX1Q9H7L2 352 aa11.24□□□□□ -0.61
PRKCB-207ENST00000486868 TRNAU1APQ9NX07 287 aaKnown RBP11.24□□□□□ -0.61
PRKCB-207ENST00000486868 EBF1Q9UH73 591 aa11.24□□□□□ -0.61
PRKCB-207ENST00000486868 MAN2B2Q9Y2E5 1009 aa11.24□□□□□ -0.61
PRKCB-207ENST00000486868 WBP11Q9Y2W2 641 aaKnown RBP11.24□□□□□ -0.61
PRKCB-207ENST00000486868 RANBP2P49792 3224 aaKnown RBP11.24□□□□□ -0.61
PRKCB-207ENST00000486868 ASPDHA6ND91 283 aa11.23□□□□□ -0.61
PRKCB-207ENST00000486868 SOX1O00570 391 aaPredicted RBP11.23□□□□□ -0.61
PRKCB-207ENST00000486868 KRT36O76013 467 aa11.23□□□□□ -0.61
PRKCB-207ENST00000486868 STAMBPO95630 424 aa11.23□□□□□ -0.61
PRKCB-207ENST00000486868 ACP5P13686 325 aa11.23□□□□□ -0.61
PRKCB-207ENST00000486868 SLC6A2P23975 617 aa11.23□□□□□ -0.61
PRKCB-207ENST00000486868 HRH2P25021 359 aa11.23□□□□□ -0.61
PRKCB-207ENST00000486868 RAB28P51157 221 aa11.23□□□□□ -0.61
PRKCB-207ENST00000486868 ABATP80404 500 aa11.23□□□□□ -0.61
PRKCB-207ENST00000486868 SRSF11Q05519 484 aaKnown RBP11.23□□□□□ -0.61
PRKCB-207ENST00000486868 LRRC74AQ0VAA2 488 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms