RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 SMIM29Q86T20 159 aa4.19□□□□□ -1.74
SMC4-218ENST00000486711 MMD2Q8IY49 270 aa4.19□□□□□ -1.74
SMC4-218ENST00000486711 CCDC170Q8IYT3 715 aa4.19□□□□□ -1.74
SMC4-218ENST00000486711 BMPERQ8N8U9 685 aa4.19□□□□□ -1.74
SMC4-218ENST00000486711 SLC26A7Q8TE54 656 aa4.19□□□□□ -1.74
SMC4-218ENST00000486711 GRHL3Q8TE85 626 aa4.19□□□□□ -1.74
SMC4-218ENST00000486711 AFAP1L1Q8TED9 768 aa4.19□□□□□ -1.74
SMC4-218ENST00000486711 GRK7Q8WTQ7 553 aa4.19□□□□□ -1.74
SMC4-218ENST00000486711 ST6GALNAC6Q969X2 333 aa4.19□□□□□ -1.74
SMC4-218ENST00000486711 TMEM143Q96AN5 459 aa4.19□□□□□ -1.74
SMC4-218ENST00000486711 PGM2Q96G03 612 aa4.19□□□□□ -1.74
SMC4-218ENST00000486711 PARK7Q99497 189 aaKnown RBP4.19□□□□□ -1.74
SMC4-218ENST00000486711 UTP14AQ9BVJ6 771 aaKnown RBP4.19□□□□□ -1.74
SMC4-218ENST00000486711 ZMYND12Q9H0C1 365 aa4.19□□□□□ -1.74
SMC4-218ENST00000486711 MINDY3Q9H8M7 445 aa4.19□□□□□ -1.74
SMC4-218ENST00000486711 LOC101059948A0A1B0GTJ6 334 aa4.18□□□□□ -1.74
SMC4-218ENST00000486711 A0A1W2PPK0 400 aa4.18□□□□□ -1.74
SMC4-218ENST00000486711 C5orf52A6NGY3 159 aa4.18□□□□□ -1.74
SMC4-218ENST00000486711 C2orf81A6NN90 581 aa4.18□□□□□ -1.74
SMC4-218ENST00000486711 SLC30A4O14863 429 aa4.18□□□□□ -1.74
SMC4-218ENST00000486711 PPIP5K2O43314 1243 aa4.18□□□□□ -1.74
SMC4-218ENST00000486711 ATP6AP2O75787 350 aa4.18□□□□□ -1.74
SMC4-218ENST00000486711 IGHV4-38-2P0DP08 117 aa4.18□□□□□ -1.74
SMC4-218ENST00000486711 LIFP15018 202 aa4.18□□□□□ -1.74
SMC4-218ENST00000486711 EFNA1P20827 205 aaPredicted RBP4.18□□□□□ -1.74
SMC4-218ENST00000486711 OAS2P29728 719 aaKnown RBP4.18□□□□□ -1.74
SMC4-218ENST00000486711 CSTF2P33240 577 aaKnown RBP eCLIP4.18□□□□□ -1.74
SMC4-218ENST00000486711 RPL21P46778 160 aaKnown RBP4.18□□□□□ -1.74
SMC4-218ENST00000486711 GSDMDP57764 484 aa4.18□□□□□ -1.74
SMC4-218ENST00000486711 TAZQ16635 292 aa4.18□□□□□ -1.74
SMC4-218ENST00000486711 PTGISQ16647 500 aa4.18□□□□□ -1.74
SMC4-218ENST00000486711 TYSND1Q2T9J0 566 aa4.18□□□□□ -1.74
SMC4-218ENST00000486711 CTU2Q2VPK5 515 aaKnown RBP4.18□□□□□ -1.74
SMC4-218ENST00000486711 SPDYCQ5MJ68 293 aa4.18□□□□□ -1.74
SMC4-218ENST00000486711 TXNRD3NBQ6F5E7 133 aa4.18□□□□□ -1.74
SMC4-218ENST00000486711 NOTUMQ6P988 496 aa4.18□□□□□ -1.74
SMC4-218ENST00000486711 SLC27A1Q6PCB7 646 aa4.18□□□□□ -1.74
SMC4-218ENST00000486711 LINC00696Q6ZRV3 163 aa4.18□□□□□ -1.74
SMC4-218ENST00000486711 PIWIL3Q7Z3Z3 882 aaKnown RBP4.18□□□□□ -1.74
SMC4-218ENST00000486711 ISCA2Q86U28 154 aa4.18□□□□□ -1.74
SMC4-218ENST00000486711 RTN4RL2Q86UN3 420 aa4.18□□□□□ -1.74
SMC4-218ENST00000486711 SNX32Q86XE0 403 aa4.18□□□□□ -1.74
SMC4-218ENST00000486711 UNC45BQ8IWX7 931 aa4.18□□□□□ -1.74
SMC4-218ENST00000486711 TUSC5Q8IXB3 177 aa4.18□□□□□ -1.74
SMC4-218ENST00000486711 EID3Q8N140 333 aa4.18□□□□□ -1.74
SMC4-218ENST00000486711 PIGBQ92521 554 aa4.18□□□□□ -1.74
SMC4-218ENST00000486711 AK8Q96MA6 479 aa4.18□□□□□ -1.74
SMC4-218ENST00000486711 FAM20AQ96MK3 541 aa4.18□□□□□ -1.74
SMC4-218ENST00000486711 TRMT61BQ9BVS5 477 aaKnown RBP4.18□□□□□ -1.74
SMC4-218ENST00000486711 MTMR12Q9C0I1 747 aa4.18□□□□□ -1.74
SMC4-218ENST00000486711 LAT2Q9GZY6 243 aa4.18□□□□□ -1.74
SMC4-218ENST00000486711 MMADHCQ9H3L0 296 aaPredicted RBP4.18□□□□□ -1.74
SMC4-218ENST00000486711 Q9H8V8 135 aa4.18□□□□□ -1.74
SMC4-218ENST00000486711 CHST11Q9NPF2 352 aa4.18□□□□□ -1.74
SMC4-218ENST00000486711 FAM207AQ9NSI2 230 aaPredicted RBP4.18□□□□□ -1.74
SMC4-218ENST00000486711 ABCB8Q9NUT2 735 aa4.18□□□□□ -1.74
SMC4-218ENST00000486711 SEPT10Q9P0V9 454 aa4.18□□□□□ -1.74
SMC4-218ENST00000486711 LEF1Q9UJU2 399 aaPredicted RBP4.18□□□□□ -1.74
SMC4-218ENST00000486711 STUB1Q9UNE7 303 aa4.18□□□□□ -1.74
SMC4-218ENST00000486711 A4D1N5 150 aa4.17□□□□□ -1.74
SMC4-218ENST00000486711 FAM172BPA6NC97 362 aa4.17□□□□□ -1.74
SMC4-218ENST00000486711 ZNF263O14978 683 aa4.17□□□□□ -1.74
SMC4-218ENST00000486711 FCGR3BO75015 233 aa4.17□□□□□ -1.74
SMC4-218ENST00000486711 PRSS1P07477 247 aa4.17□□□□□ -1.74
SMC4-218ENST00000486711 STAG3L1P0CL83 205 aa4.17□□□□□ -1.74
SMC4-218ENST00000486711 NR1D1P20393 614 aa4.17□□□□□ -1.74
SMC4-218ENST00000486711 CA4P22748 312 aa4.17□□□□□ -1.74
SMC4-218ENST00000486711 CA6P23280 308 aa4.17□□□□□ -1.74
SMC4-218ENST00000486711 MARK3P27448 753 aa4.17□□□□□ -1.74
SMC4-218ENST00000486711 GLIPR1P48060 266 aa4.17□□□□□ -1.74
SMC4-218ENST00000486711 VAMP7P51809 220 aa4.17□□□□□ -1.74
SMC4-218ENST00000486711 MAZP56270 477 aaKnown RBP4.17□□□□□ -1.74
SMC4-218ENST00000486711 PTENP60484 403 aa4.17□□□□□ -1.74
SMC4-218ENST00000486711 HERV-K104P61576 105 aa4.17□□□□□ -1.74
SMC4-218ENST00000486711 NONOQ15233 471 aaKnown RBP eCLIP4.17□□□□□ -1.74
SMC4-218ENST00000486711 CCDC6Q16204 474 aa4.17□□□□□ -1.74
SMC4-218ENST00000486711 RBBP7Q16576 425 aa4.17□□□□□ -1.74
SMC4-218ENST00000486711 TECRLQ5HYJ1 363 aa4.17□□□□□ -1.74
SMC4-218ENST00000486711 OR4A47Q6IF82 309 aa4.17□□□□□ -1.74
SMC4-218ENST00000486711 IYDQ6PHW0 289 aa4.17□□□□□ -1.74
SMC4-218ENST00000486711 GBP6Q6ZN66 633 aa4.17□□□□□ -1.74
SMC4-218ENST00000486711 SYCP3Q8IZU3 236 aa4.17□□□□□ -1.74
SMC4-218ENST00000486711 MSANTD4Q8NCY6 345 aa4.17□□□□□ -1.74
SMC4-218ENST00000486711 OR52N5Q8NH56 324 aa4.17□□□□□ -1.74
SMC4-218ENST00000486711 SEPT1Q8WYJ6 367 aa4.17□□□□□ -1.74
SMC4-218ENST00000486711 TM9SF4Q92544 642 aa4.17□□□□□ -1.74
SMC4-218ENST00000486711 RIT1Q92963 219 aa4.17□□□□□ -1.74
SMC4-218ENST00000486711 ALG14Q96F25 216 aa4.17□□□□□ -1.74
SMC4-218ENST00000486711 FUT8Q9BYC5 575 aa4.17□□□□□ -1.74
SMC4-218ENST00000486711 LMAN1LQ9HAT1 526 aa4.17□□□□□ -1.74
SMC4-218ENST00000486711 TUFT1Q9NNX1 390 aa4.17□□□□□ -1.74
SMC4-218ENST00000486711 SDR39U1Q9NRG7 319 aaPredicted RBP4.17□□□□□ -1.74
SMC4-218ENST00000486711 ZFP57Q9NU63 452 aa4.17□□□□□ -1.74
SMC4-218ENST00000486711 PKD2L2Q9NZM6 624 aa4.17□□□□□ -1.74
SMC4-218ENST00000486711 FLRT3Q9NZU0 649 aa4.17□□□□□ -1.74
SMC4-218ENST00000486711 ACAD8Q9UKU7 415 aa4.17□□□□□ -1.74
SMC4-218ENST00000486711 LIPT1Q9Y234 373 aa4.17□□□□□ -1.74
SMC4-218ENST00000486711 IGSF1Q8N6C5 1336 aa4.17□□□□□ -1.74
SMC4-218ENST00000486711 CASTOR2A6NHX0 329 aa4.16□□□□□ -1.74
SMC4-218ENST00000486711 SLC33A1O00400 549 aaPredicted RBP4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms