RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 CNOT4O95628 575 aaKnown RBP6.33□□□□□ -1.4
SMC4-217ENST00000485867 HBQ1P09105 142 aa6.33□□□□□ -1.4
SMC4-217ENST00000485867 COL6A2P12110 1019 aa6.33□□□□□ -1.4
SMC4-217ENST00000485867 IGFBP2P18065 325 aa6.33□□□□□ -1.4
SMC4-217ENST00000485867 ERCC2P18074 760 aa6.33□□□□□ -1.4
SMC4-217ENST00000485867 IDSP22304 550 aa6.33□□□□□ -1.4
SMC4-217ENST00000485867 HALP42357 657 aa6.33□□□□□ -1.4
SMC4-217ENST00000485867 FOLH1Q04609 750 aa6.33□□□□□ -1.4
SMC4-217ENST00000485867 RBPJQ06330 500 aa6.33□□□□□ -1.4
SMC4-217ENST00000485867 MFAP5Q13361 173 aa6.33□□□□□ -1.4
SMC4-217ENST00000485867 CEBPEQ15744 281 aa6.33□□□□□ -1.4
SMC4-217ENST00000485867 RPE65Q16518 533 aa6.33□□□□□ -1.4
SMC4-217ENST00000485867 ZNF569Q5MCW4 686 aa6.33□□□□□ -1.4
SMC4-217ENST00000485867 IRAK1BP1Q5VVH5 260 aa6.33□□□□□ -1.4
SMC4-217ENST00000485867 TMEM198Q66K66 360 aa6.33□□□□□ -1.4
SMC4-217ENST00000485867 WDR59Q6PJI9 974 aa6.33□□□□□ -1.4
SMC4-217ENST00000485867 LINC00696Q6ZRV3 163 aa6.33□□□□□ -1.4
SMC4-217ENST00000485867 NCCRP1Q6ZVX7 275 aaPredicted RBP6.33□□□□□ -1.4
SMC4-217ENST00000485867 C11orf96Q7Z7L8 435 aa6.33□□□□□ -1.4
SMC4-217ENST00000485867 TMEM200AQ86VY9 491 aa6.33□□□□□ -1.4
SMC4-217ENST00000485867 NDUFAF2Q8N183 169 aa6.33□□□□□ -1.4
SMC4-217ENST00000485867 NELFBQ8WX92 580 aa6.33□□□□□ -1.4
SMC4-217ENST00000485867 ARSGQ96EG1 525 aa6.33□□□□□ -1.4
SMC4-217ENST00000485867 CCDC34Q96HJ3 373 aa6.33□□□□□ -1.4
SMC4-217ENST00000485867 SORCS2Q96PQ0 1159 aa6.33□□□□□ -1.4
SMC4-217ENST00000485867 ZFYVE21Q9BQ24 234 aa6.33□□□□□ -1.4
SMC4-217ENST00000485867 AARSD1Q9BTE6 412 aaKnown RBP6.33□□□□□ -1.4
SMC4-217ENST00000485867 LHPPQ9H008 270 aa6.33□□□□□ -1.4
SMC4-217ENST00000485867 TRIM39Q9HCM9 518 aa6.33□□□□□ -1.4
SMC4-217ENST00000485867 HRASLS2Q9NWW9 162 aa6.33□□□□□ -1.4
SMC4-217ENST00000485867 NDOR1Q9UHB4 597 aa6.33□□□□□ -1.4
SMC4-217ENST00000485867 CDYLQ9Y232 598 aa6.33□□□□□ -1.4
SMC4-217ENST00000485867 TRAV17A0A0B4J275 112 aa6.32□□□□□ -1.4
SMC4-217ENST00000485867 C1orf232A0A0U1RR37 186 aa6.32□□□□□ -1.4
SMC4-217ENST00000485867 BICDL2A1A5D9 508 aa6.32□□□□□ -1.4
SMC4-217ENST00000485867 SOCS6O14544 535 aa6.32□□□□□ -1.4
SMC4-217ENST00000485867 PRODHO43272 600 aa6.32□□□□□ -1.4
SMC4-217ENST00000485867 KLF4O43474 513 aa6.32□□□□□ -1.4
SMC4-217ENST00000485867 MTX2O75431 263 aa6.32□□□□□ -1.4
SMC4-217ENST00000485867 WISP2O76076 250 aa6.32□□□□□ -1.4
SMC4-217ENST00000485867 SMC2O95347 1197 aa6.32□□□□□ -1.4
SMC4-217ENST00000485867 CRYABP02511 175 aaKnown RBP6.32□□□□□ -1.4
SMC4-217ENST00000485867 CD63P08962 238 aa6.32□□□□□ -1.4
SMC4-217ENST00000485867 KRT3P12035 628 aa6.32□□□□□ -1.4
SMC4-217ENST00000485867 ST6GAL1P15907 406 aa6.32□□□□□ -1.4
SMC4-217ENST00000485867 CDH3P22223 829 aa6.32□□□□□ -1.4
SMC4-217ENST00000485867 MMP11P24347 488 aa6.32□□□□□ -1.4
SMC4-217ENST00000485867 PPP1R2P41236 205 aa6.32□□□□□ -1.4
SMC4-217ENST00000485867 LMAN1P49257 510 aa6.32□□□□□ -1.4
SMC4-217ENST00000485867 SELENOPP49908 381 aa6.32□□□□□ -1.4
SMC4-217ENST00000485867 TNFSF10P50591 281 aa6.32□□□□□ -1.4
SMC4-217ENST00000485867 EPHB1P54762 984 aa6.32□□□□□ -1.4
SMC4-217ENST00000485867 GSCP56915 257 aaPredicted RBP6.32□□□□□ -1.4
SMC4-217ENST00000485867 KRT85P78386 507 aa6.32□□□□□ -1.4
SMC4-217ENST00000485867 PTP4A2Q12974 167 aa6.32□□□□□ -1.4
SMC4-217ENST00000485867 PKP1Q13835 747 aa6.32□□□□□ -1.4
SMC4-217ENST00000485867 IHHQ14623 411 aa6.32□□□□□ -1.4
SMC4-217ENST00000485867 CA9Q16790 459 aa6.32□□□□□ -1.4
SMC4-217ENST00000485867 KHDC1Q4VXA5 237 aaKnown RBP6.32□□□□□ -1.4
SMC4-217ENST00000485867 C1orf189Q5VU69 101 aa6.32□□□□□ -1.4
SMC4-217ENST00000485867 CD276Q5ZPR3 534 aa6.32□□□□□ -1.4
SMC4-217ENST00000485867 ARMC6Q6NXE6 501 aa6.32□□□□□ -1.4
SMC4-217ENST00000485867 RFX8Q6ZV50 586 aa6.32□□□□□ -1.4
SMC4-217ENST00000485867 BBS5Q8N3I7 341 aa6.32□□□□□ -1.4
SMC4-217ENST00000485867 ANKRD20A12PQ8NF67 263 aa6.32□□□□□ -1.4
SMC4-217ENST00000485867 SLC20A1Q8WUM9 679 aa6.32□□□□□ -1.4
SMC4-217ENST00000485867 SMARCE1Q969G3 411 aa6.32□□□□□ -1.4
SMC4-217ENST00000485867 GLYATL1Q969I3 302 aa6.32□□□□□ -1.4
SMC4-217ENST00000485867 AJUBAQ96IF1 538 aa6.32□□□□□ -1.4
SMC4-217ENST00000485867 LMF1Q96S06 567 aa6.32□□□□□ -1.4
SMC4-217ENST00000485867 LYSMD1Q96S90 227 aa6.32□□□□□ -1.4
SMC4-217ENST00000485867 SPATA16Q9BXB7 569 aa6.32□□□□□ -1.4
SMC4-217ENST00000485867 DEF6Q9H4E7 631 aa6.32□□□□□ -1.4
SMC4-217ENST00000485867 DHX35Q9H5Z1 703 aaKnown RBP6.32□□□□□ -1.4
SMC4-217ENST00000485867 PKD2L2Q9NZM6 624 aa6.32□□□□□ -1.4
SMC4-217ENST00000485867 IFT80Q9P2H3 777 aaPredicted RBP6.32□□□□□ -1.4
SMC4-217ENST00000485867 ZFP69BQ9UJL9 534 aa6.32□□□□□ -1.4
SMC4-217ENST00000485867 SERTAD3Q9UJW9 196 aa6.32□□□□□ -1.4
SMC4-217ENST00000485867 POMT2Q9UKY4 750 aa6.32□□□□□ -1.4
SMC4-217ENST00000485867 CHKBQ9Y259 395 aa6.32□□□□□ -1.4
SMC4-217ENST00000485867 ZNF835Q9Y2P0 537 aa6.32□□□□□ -1.4
SMC4-217ENST00000485867 MEMO1Q9Y316 297 aa6.32□□□□□ -1.4
SMC4-217ENST00000485867 HS3ST3B1Q9Y662 390 aa6.32□□□□□ -1.4
SMC4-217ENST00000485867 VPS13CQ709C8 3753 aa6.32□□□□□ -1.4
SMC4-217ENST00000485867 FBN1P35555 2871 aaKnown RBP6.32□□□□□ -1.4
SMC4-217ENST00000485867 RGSL1A5PLK6 1076 aa6.31□□□□□ -1.4
SMC4-217ENST00000485867 OR6C74A6NCV1 312 aa6.31□□□□□ -1.4
SMC4-217ENST00000485867 FOXO6A8MYZ6 492 aa6.31□□□□□ -1.4
SMC4-217ENST00000485867 EIF3CLB5ME19 914 aaKnown RBP6.31□□□□□ -1.4
SMC4-217ENST00000485867 H3BMH7 237 aa6.31□□□□□ -1.4
SMC4-217ENST00000485867 PRLP01236 227 aa6.31□□□□□ -1.4
SMC4-217ENST00000485867 MTHFD1P11586 935 aaKnown RBP6.31□□□□□ -1.4
SMC4-217ENST00000485867 VCLP18206 1134 aa6.31□□□□□ -1.4
SMC4-217ENST00000485867 POLR2CP19387 275 aaPredicted RBP6.31□□□□□ -1.4
SMC4-217ENST00000485867 MMP13P45452 471 aa6.31□□□□□ -1.4
SMC4-217ENST00000485867 MEOX1P50221 254 aa6.31□□□□□ -1.4
SMC4-217ENST00000485867 DCDC1P59894 354 aa6.31□□□□□ -1.4
SMC4-217ENST00000485867 GPR85P60893 370 aa6.31□□□□□ -1.4
SMC4-217ENST00000485867 ADAM8P78325 824 aa6.31□□□□□ -1.4
SMC4-217ENST00000485867 ARG2P78540 354 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms