RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 GPSM1Q86YR5 675 aa11.39□□□□□ -0.59
HPS4-214ENST00000485842 TMEM126BQ8IUX1 230 aa11.39□□□□□ -0.59
HPS4-214ENST00000485842 CENPLQ8N0S6 344 aaPredicted RBP11.39□□□□□ -0.59
HPS4-214ENST00000485842 KDF1Q8NAX2 398 aaPredicted RBP11.39□□□□□ -0.59
HPS4-214ENST00000485842 ZNF248Q8NDW4 579 aa11.39□□□□□ -0.59
HPS4-214ENST00000485842 OR1L3Q8NH93 324 aa11.39□□□□□ -0.59
HPS4-214ENST00000485842 KCNE4Q8WWG9 221 aa11.39□□□□□ -0.59
HPS4-214ENST00000485842 PYCR2Q96C36 320 aa11.39□□□□□ -0.59
HPS4-214ENST00000485842 NXNL1Q96CM4 212 aa11.39□□□□□ -0.59
HPS4-214ENST00000485842 ZNF501Q96CX3 271 aaPredicted RBP11.39□□□□□ -0.59
HPS4-214ENST00000485842 ZPBPQ9BS86 351 aa11.39□□□□□ -0.59
HPS4-214ENST00000485842 DPH7Q9BTV6 452 aa11.39□□□□□ -0.59
HPS4-214ENST00000485842 B3GNT4Q9C0J1 378 aa11.39□□□□□ -0.59
HPS4-214ENST00000485842 NMRAL1Q9HBL8 299 aa11.39□□□□□ -0.59
HPS4-214ENST00000485842 IGSF5Q9NSI5 407 aa11.39□□□□□ -0.59
HPS4-214ENST00000485842 CUEDC1Q9NWM3 386 aaPredicted RBP11.39□□□□□ -0.59
HPS4-214ENST00000485842 IRAK4Q9NWZ3 460 aa11.39□□□□□ -0.59
HPS4-214ENST00000485842 CD274Q9NZQ7 290 aa11.39□□□□□ -0.59
HPS4-214ENST00000485842 TBK1Q9UHD2 729 aa11.39□□□□□ -0.59
HPS4-214ENST00000485842 ZMIZ1Q9ULJ6 1067 aa11.39□□□□□ -0.59
HPS4-214ENST00000485842 MAP1BP46821 2468 aaKnown RBP11.38□□□□□ -0.59
HPS4-214ENST00000485842 IQANK1A0A1B0GTG1 560 aa11.38□□□□□ -0.59
HPS4-214ENST00000485842 TEX51A0A1B0GUA7 166 aa11.38□□□□□ -0.59
HPS4-214ENST00000485842 SUPT3HB4E1H0 165 aa11.38□□□□□ -0.59
HPS4-214ENST00000485842 STMND1H3BQB6 276 aa11.38□□□□□ -0.59
HPS4-214ENST00000485842 SUPT3HO75486 399 aa11.38□□□□□ -0.59
HPS4-214ENST00000485842 STK17BO94768 372 aa11.38□□□□□ -0.59
HPS4-214ENST00000485842 LIPCP11150 499 aa11.38□□□□□ -0.59
HPS4-214ENST00000485842 ZNF28P17035 718 aa11.38□□□□□ -0.59
HPS4-214ENST00000485842 CCND1P24385 295 aa11.38□□□□□ -0.59
HPS4-214ENST00000485842 CD82P27701 267 aa11.38□□□□□ -0.59
HPS4-214ENST00000485842 SLC26A3P40879 764 aa11.38□□□□□ -0.59
HPS4-214ENST00000485842 MAGEA12P43365 314 aa11.38□□□□□ -0.59
HPS4-214ENST00000485842 SLCO1A2P46721 670 aa11.38□□□□□ -0.59
HPS4-214ENST00000485842 GABRA4P48169 554 aa11.38□□□□□ -0.59
HPS4-214ENST00000485842 CSRP3P50461 194 aa11.38□□□□□ -0.59
HPS4-214ENST00000485842 ITGA1P56199 1179 aa11.38□□□□□ -0.59
HPS4-214ENST00000485842 ABATP80404 500 aa11.38□□□□□ -0.59
HPS4-214ENST00000485842 CDKL1Q00532 357 aa11.38□□□□□ -0.59
HPS4-214ENST00000485842 PRDX1Q06830 199 aaKnown RBP11.38□□□□□ -0.59
HPS4-214ENST00000485842 COL9A2Q14055 689 aaPredicted RBP11.38□□□□□ -0.59
HPS4-214ENST00000485842 NAA25Q14CX7 972 aa11.38□□□□□ -0.59
HPS4-214ENST00000485842 TGFBIQ15582 683 aa11.38□□□□□ -0.59
HPS4-214ENST00000485842 TGIF1Q15583 401 aa11.38□□□□□ -0.59
HPS4-214ENST00000485842 FAM83EQ2M2I3 478 aa11.38□□□□□ -0.59
HPS4-214ENST00000485842 C18orf21Q32NC0 220 aaPredicted RBP11.38□□□□□ -0.59
HPS4-214ENST00000485842 FBXO48Q5FWF7 155 aa11.38□□□□□ -0.59
HPS4-214ENST00000485842 PWWP2BQ6NUJ5 590 aa11.38□□□□□ -0.59
HPS4-214ENST00000485842 CCDC91Q7Z6B0 441 aa11.38□□□□□ -0.59
HPS4-214ENST00000485842 C17orf64Q86WR6 236 aa11.38□□□□□ -0.59
HPS4-214ENST00000485842 DNAJC22Q8N4W6 341 aa11.38□□□□□ -0.59
HPS4-214ENST00000485842 OR8K5Q8NH50 307 aa11.38□□□□□ -0.59
HPS4-214ENST00000485842 EPS8L3Q8TE67 593 aaKnown RBP11.38□□□□□ -0.59
HPS4-214ENST00000485842 ISL2Q96A47 359 aa11.38□□□□□ -0.59
HPS4-214ENST00000485842 KIAA1191Q96A73 305 aa11.38□□□□□ -0.59
HPS4-214ENST00000485842 SGPP1Q9BX95 441 aa11.38□□□□□ -0.59
HPS4-214ENST00000485842 PCMTD2Q9NV79 361 aa11.38□□□□□ -0.59
HPS4-214ENST00000485842 WWOXQ9NZC7 414 aa11.38□□□□□ -0.59
HPS4-214ENST00000485842 ACSL6Q9UKU0 697 aa11.38□□□□□ -0.59
HPS4-214ENST00000485842 PLCL2Q9UPR0 1127 aa11.38□□□□□ -0.59
HPS4-214ENST00000485842 SH2B3Q9UQQ2 575 aa11.38□□□□□ -0.59
HPS4-214ENST00000485842 HEATR5BQ9P2D3 2071 aa11.37□□□□□ -0.59
HPS4-214ENST00000485842 IGKV1-8A0A0C4DH67 115 aa11.37□□□□□ -0.59
HPS4-214ENST00000485842 A0A0J9YVX5 310 aa11.37□□□□□ -0.59
HPS4-214ENST00000485842 OR2A25A4D2G3 310 aa11.37□□□□□ -0.59
HPS4-214ENST00000485842 RRP8O43159 456 aaKnown RBP11.37□□□□□ -0.59
HPS4-214ENST00000485842 KLK10O43240 276 aa11.37□□□□□ -0.59
HPS4-214ENST00000485842 RAD1O60671 282 aa11.37□□□□□ -0.59
HPS4-214ENST00000485842 CTSVO60911 334 aa11.37□□□□□ -0.59
HPS4-214ENST00000485842 SCRG1O75711 98 aa11.37□□□□□ -0.59
HPS4-214ENST00000485842 OR2B3O76000 313 aa11.37□□□□□ -0.59
HPS4-214ENST00000485842 KLHL2O95198 593 aa11.37□□□□□ -0.59
HPS4-214ENST00000485842 CTSBP07858 339 aa11.37□□□□□ -0.59
HPS4-214ENST00000485842 SPTBP11277 2137 aa11.37□□□□□ -0.59
HPS4-214ENST00000485842 CDH1P12830 882 aa11.37□□□□□ -0.59
HPS4-214ENST00000485842 EIF2S3P41091 472 aaKnown RBP11.37□□□□□ -0.59
HPS4-214ENST00000485842 ATP1A2P50993 1020 aa11.37□□□□□ -0.59
HPS4-214ENST00000485842 ZXDCQ2QGD7 858 aaPredicted RBP11.37□□□□□ -0.59
HPS4-214ENST00000485842 PTCHD3Q3KNS1 767 aa11.37□□□□□ -0.59
HPS4-214ENST00000485842 ZC3H12BQ5HYM0 836 aaKnown RBP11.37□□□□□ -0.59
HPS4-214ENST00000485842 PRAMEF17Q5VTA0 474 aa11.37□□□□□ -0.59
HPS4-214ENST00000485842 KLC3Q6P597 504 aa11.37□□□□□ -0.59
HPS4-214ENST00000485842 LCTLQ6UWM7 567 aa11.37□□□□□ -0.59
HPS4-214ENST00000485842 LRRC69Q6ZNQ3 347 aa11.37□□□□□ -0.59
HPS4-214ENST00000485842 BPHLQ86WA6 291 aaPredicted RBP11.37□□□□□ -0.59
HPS4-214ENST00000485842 PAQR7Q86WK9 346 aa11.37□□□□□ -0.59
HPS4-214ENST00000485842 GPR135Q8IZ08 494 aa11.37□□□□□ -0.59
HPS4-214ENST00000485842 PLD6Q8N2A8 252 aaKnown RBP11.37□□□□□ -0.59
HPS4-214ENST00000485842 GALNT6Q8NCL4 622 aa11.37□□□□□ -0.59
HPS4-214ENST00000485842 OR56A3Q8NH54 315 aa11.37□□□□□ -0.59
HPS4-214ENST00000485842 OR2W6PQ8NHA6 318 aa11.37□□□□□ -0.59
HPS4-214ENST00000485842 STAG3L4Q8TBR4 150 aa11.37□□□□□ -0.59
HPS4-214ENST00000485842 CAVIN3Q969G5 261 aa11.37□□□□□ -0.59
HPS4-214ENST00000485842 ZUFSPQ96AP4 578 aa11.37□□□□□ -0.59
HPS4-214ENST00000485842 RHBDF1Q96CC6 855 aa11.37□□□□□ -0.59
HPS4-214ENST00000485842 MTBPQ96DY7 904 aa11.37□□□□□ -0.59
HPS4-214ENST00000485842 SCYL1Q96KG9 808 aa11.37□□□□□ -0.59
HPS4-214ENST00000485842 TSNARE1Q96NA8 513 aa11.37□□□□□ -0.59
HPS4-214ENST00000485842 FCRL4Q96PJ5 515 aa11.37□□□□□ -0.59
HPS4-214ENST00000485842 SPRTNQ9H040 489 aaPredicted RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms