RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, human

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGN1-215	ENST00000485550	OR2L8	Q8NGY9	312 aa		10.13	□□□□□ -0.79
HMGN1-215	ENST00000485550	SLC22A18	Q96BI1	424 aa		10.13	□□□□□ -0.79
HMGN1-215	ENST00000485550	MFSD3	Q96ES6	412 aa		10.13	□□□□□ -0.79
HMGN1-215	ENST00000485550	BARD1	Q99728	777 aa	Known RBP	10.13	□□□□□ -0.79
HMGN1-215	ENST00000485550	MIPEP	Q99797	713 aa		10.13	□□□□□ -0.79
HMGN1-215	ENST00000485550	P2RY12	Q9H244	342 aa		10.13	□□□□□ -0.79
HMGN1-215	ENST00000485550	ZNF552	Q9H707	407 aa	Predicted RBP	10.13	□□□□□ -0.79
HMGN1-215	ENST00000485550	RUBCNL	Q9H714	662 aa		10.13	□□□□□ -0.79
HMGN1-215	ENST00000485550	ZBTB20	Q9HC78	741 aa	Predicted RBP	10.13	□□□□□ -0.79
HMGN1-215	ENST00000485550	TREX1	Q9NSU2	369 aa		10.13	□□□□□ -0.79
HMGN1-215	ENST00000485550	SYBU	Q9NX95	663 aa		10.13	□□□□□ -0.79
HMGN1-215	ENST00000485550	BFAR	Q9NZS9	450 aa		10.13	□□□□□ -0.79
HMGN1-215	ENST00000485550	STOX2	Q9P2F5	926 aa	Predicted RBP	10.13	□□□□□ -0.79
HMGN1-215	ENST00000485550	GNPTG	Q9UJJ9	305 aa		10.13	□□□□□ -0.79
HMGN1-215	ENST00000485550	DRG1	Q9Y295	367 aa	Known RBP	10.13	□□□□□ -0.79
HMGN1-215	ENST00000485550		A0A0J9YVX5	310 aa		10.12	□□□□□ -0.79
HMGN1-215	ENST00000485550		A0A1B0GX78	115 aa		10.12	□□□□□ -0.79
HMGN1-215	ENST00000485550	CEP104	O60308	925 aa		10.12	□□□□□ -0.79
HMGN1-215	ENST00000485550	NRP2	O60462	931 aa		10.12	□□□□□ -0.79
HMGN1-215	ENST00000485550	NIPSNAP2	O75323	286 aa		10.12	□□□□□ -0.79
HMGN1-215	ENST00000485550	AVIL	O75366	819 aa		10.12	□□□□□ -0.79
HMGN1-215	ENST00000485550	C1orf105	O95561	183 aa		10.12	□□□□□ -0.79
HMGN1-215	ENST00000485550	EIF2S1	P05198	315 aa	Known RBP	10.12	□□□□□ -0.79
HMGN1-215	ENST00000485550	F7	P08709	466 aa	Predicted RBP	10.12	□□□□□ -0.79
HMGN1-215	ENST00000485550	ITGAX	P20702	1163 aa		10.12	□□□□□ -0.79
HMGN1-215	ENST00000485550	ITGA3	P26006	1051 aa		10.12	□□□□□ -0.79
HMGN1-215	ENST00000485550	ARNT	P27540	789 aa		10.12	□□□□□ -0.79
HMGN1-215	ENST00000485550	OR1D4	P47884	311 aa		10.12	□□□□□ -0.79
HMGN1-215	ENST00000485550	NPY2R	P49146	381 aa		10.12	□□□□□ -0.79
HMGN1-215	ENST00000485550	ARSF	P54793	590 aa		10.12	□□□□□ -0.79
HMGN1-215	ENST00000485550	VSX2	P58304	361 aa	Predicted RBP	10.12	□□□□□ -0.79
HMGN1-215	ENST00000485550	YBX1	P67809	324 aa	Known RBP	10.12	□□□□□ -0.79
HMGN1-215	ENST00000485550	FASTK	Q14296	549 aa	Known RBP	10.12	□□□□□ -0.79
HMGN1-215	ENST00000485550	MYBPC3	Q14896	1274 aa		10.12	□□□□□ -0.79
HMGN1-215	ENST00000485550	KRTAP21-3	Q3LHN1	58 aa		10.12	□□□□□ -0.79
HMGN1-215	ENST00000485550	ZC3H12B	Q5HYM0	836 aa	Known RBP	10.12	□□□□□ -0.79
HMGN1-215	ENST00000485550	CTSL3P	Q5NE16	218 aa		10.12	□□□□□ -0.79
HMGN1-215	ENST00000485550	WASHC2D	Q5SRD0	308 aa		10.12	□□□□□ -0.79
HMGN1-215	ENST00000485550	SWT1	Q5T5J6	900 aa	Known RBP	10.12	□□□□□ -0.79
HMGN1-215	ENST00000485550	GDF7	Q7Z4P5	450 aa		10.12	□□□□□ -0.79
HMGN1-215	ENST00000485550	KCNMB4	Q86W47	210 aa		10.12	□□□□□ -0.79
HMGN1-215	ENST00000485550	ZADH2	Q8N4Q0	377 aa		10.12	□□□□□ -0.79
HMGN1-215	ENST00000485550	DLG3	Q92796	817 aa		10.12	□□□□□ -0.79
HMGN1-215	ENST00000485550	PEX13	Q92968	403 aa		10.12	□□□□□ -0.79
HMGN1-215	ENST00000485550	RAD51AP1	Q96B01	352 aa		10.12	□□□□□ -0.79
HMGN1-215	ENST00000485550	IP6K3	Q96PC2	410 aa		10.12	□□□□□ -0.79
HMGN1-215	ENST00000485550	PANX3	Q96QZ0	392 aa		10.12	□□□□□ -0.79
HMGN1-215	ENST00000485550	SELENOS	Q9BQE4	189 aa		10.12	□□□□□ -0.79
HMGN1-215	ENST00000485550	TRIM56	Q9BRZ2	755 aa	Known RBP	10.12	□□□□□ -0.79
HMGN1-215	ENST00000485550	ACAT2	Q9BWD1	397 aa		10.12	□□□□□ -0.79
HMGN1-215	ENST00000485550	IL22	Q9GZX6	179 aa		10.12	□□□□□ -0.79
HMGN1-215	ENST00000485550	SOX17	Q9H6I2	414 aa	Predicted RBP	10.12	□□□□□ -0.79
HMGN1-215	ENST00000485550	ATP13A2	Q9NQ11	1180 aa		10.12	□□□□□ -0.79
HMGN1-215	ENST00000485550	EIF2B3	Q9NR50	452 aa	Known RBP	10.12	□□□□□ -0.79
HMGN1-215	ENST00000485550	AGPAT4	Q9NRZ5	378 aa		10.12	□□□□□ -0.79
HMGN1-215	ENST00000485550	CUTC	Q9NTM9	273 aa		10.12	□□□□□ -0.79
HMGN1-215	ENST00000485550	INTS7	Q9NVH2	962 aa	Known RBP	10.12	□□□□□ -0.79
HMGN1-215	ENST00000485550	GALP	Q9UBC7	116 aa		10.12	□□□□□ -0.79
HMGN1-215	ENST00000485550	COPG2	Q9UBF2	871 aa		10.12	□□□□□ -0.79
HMGN1-215	ENST00000485550	ZC3H7B	Q9UGR2	993 aa	Known RBP	10.12	□□□□□ -0.79
HMGN1-215	ENST00000485550	CDC23	Q9UJX2	597 aa		10.12	□□□□□ -0.79
HMGN1-215	ENST00000485550	CRYL1	Q9Y2S2	319 aa		10.12	□□□□□ -0.79
HMGN1-215	ENST00000485550	CSAG2	Q9Y5P2	127 aa		10.12	□□□□□ -0.79
HMGN1-215	ENST00000485550	MAU2	Q9Y6X3	613 aa		10.12	□□□□□ -0.79
HMGN1-215	ENST00000485550	LOC105369274	A0A096LPK9	316 aa		10.11	□□□□□ -0.79
HMGN1-215	ENST00000485550	LOC102723532	A0A0G2JNH3	316 aa		10.11	□□□□□ -0.79
HMGN1-215	ENST00000485550	E2F3	O00716	465 aa		10.11	□□□□□ -0.79
HMGN1-215	ENST00000485550	PRICKLE3	O43900	615 aa	Predicted RBP	10.11	□□□□□ -0.79
HMGN1-215	ENST00000485550	CTSV	O60911	334 aa		10.11	□□□□□ -0.79
HMGN1-215	ENST00000485550	CD63	P08962	238 aa		10.11	□□□□□ -0.79
HMGN1-215	ENST00000485550	CHRM3	P20309	590 aa		10.11	□□□□□ -0.79
HMGN1-215	ENST00000485550	RPS3	P23396	243 aa	Known RBP eCLIP	10.11	□□□□□ -0.79
HMGN1-215	ENST00000485550	GCGR	P47871	477 aa		10.11	□□□□□ -0.79
HMGN1-215	ENST00000485550	TSTA3	Q13630	321 aa	Predicted RBP	10.11	□□□□□ -0.79
HMGN1-215	ENST00000485550	GRM7	Q14831	915 aa		10.11	□□□□□ -0.79
HMGN1-215	ENST00000485550	NKG7	Q16617	165 aa		10.11	□□□□□ -0.79
HMGN1-215	ENST00000485550	FRMPD2B	Q6IN97	320 aa		10.11	□□□□□ -0.79
HMGN1-215	ENST00000485550	LRRC8B	Q6P9F7	803 aa		10.11	□□□□□ -0.79
HMGN1-215	ENST00000485550	DRICH1	Q6PGQ1	229 aa	Predicted RBP	10.11	□□□□□ -0.79
HMGN1-215	ENST00000485550		Q6ZS92	163 aa		10.11	□□□□□ -0.79
HMGN1-215	ENST00000485550	COX15	Q7KZN9	410 aa		10.11	□□□□□ -0.79
HMGN1-215	ENST00000485550	OVCH1	Q7RTY7	1134 aa		10.11	□□□□□ -0.79
HMGN1-215	ENST00000485550	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	10.11	□□□□□ -0.79
HMGN1-215	ENST00000485550	PARP9	Q8IXQ6	854 aa		10.11	□□□□□ -0.79
HMGN1-215	ENST00000485550	PRSS58	Q8IYP2	241 aa		10.11	□□□□□ -0.79
HMGN1-215	ENST00000485550	OR4N4	Q8N0Y3	316 aa		10.11	□□□□□ -0.79
HMGN1-215	ENST00000485550	MPP5	Q8N3R9	675 aa		10.11	□□□□□ -0.79
HMGN1-215	ENST00000485550	TTC29	Q8NA56	475 aa	Predicted RBP	10.11	□□□□□ -0.79
HMGN1-215	ENST00000485550	DENND1A	Q8TEH3	1009 aa		10.11	□□□□□ -0.79
HMGN1-215	ENST00000485550	MAIP1	Q8WWC4	291 aa		10.11	□□□□□ -0.79
HMGN1-215	ENST00000485550	FOPNL	Q96NB1	174 aa		10.11	□□□□□ -0.79
HMGN1-215	ENST00000485550	BIRC8	Q96P09	236 aa		10.11	□□□□□ -0.79
HMGN1-215	ENST00000485550	KIFC1	Q9BW19	673 aa		10.11	□□□□□ -0.79
HMGN1-215	ENST00000485550	SLC6A20	Q9NP91	592 aa		10.11	□□□□□ -0.79
HMGN1-215	ENST00000485550	IL1RAPL1	Q9NZN1	696 aa		10.11	□□□□□ -0.79
HMGN1-215	ENST00000485550	CTSF	Q9UBX1	484 aa		10.11	□□□□□ -0.79
HMGN1-215	ENST00000485550	FBXL4	Q9UKA2	621 aa		10.11	□□□□□ -0.79
HMGN1-215	ENST00000485550	GTF3C1	Q12789	2109 aa		10.1	□□□□□ -0.79
HMGN1-215	ENST00000485550	NCOA6	Q14686	2063 aa	Predicted RBP	10.1	□□□□□ -0.79
HMGN1-215	ENST00000485550	SPG11	Q96JI7	2443 aa		10.1	□□□□□ -0.79

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