RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 GLRBP48167 497 aa10.94□□□□□ -0.66
SCFD1-206ENST00000484733 KCNJ11Q14654 390 aa10.94□□□□□ -0.66
SCFD1-206ENST00000484733 MUM1Q2TAK8 710 aa10.94□□□□□ -0.66
SCFD1-206ENST00000484733 IRAK1BP1Q5VVH5 260 aa10.94□□□□□ -0.66
SCFD1-206ENST00000484733 B3GNTL1Q67FW5 361 aaPredicted RBP10.94□□□□□ -0.66
SCFD1-206ENST00000484733 ST6GALNAC3Q8NDV1 305 aa10.94□□□□□ -0.66
SCFD1-206ENST00000484733 OR11G2Q8NGC1 345 aa10.94□□□□□ -0.66
SCFD1-206ENST00000484733 SKA2Q8WVK7 121 aaPredicted RBP10.94□□□□□ -0.66
SCFD1-206ENST00000484733 MVB12AQ96EY5 273 aa10.94□□□□□ -0.66
SCFD1-206ENST00000484733 SOX17Q9H6I2 414 aaPredicted RBP10.94□□□□□ -0.66
SCFD1-206ENST00000484733 FAM114A2Q9NRY5 505 aa10.94□□□□□ -0.66
SCFD1-206ENST00000484733 CTSFQ9UBX1 484 aa10.94□□□□□ -0.66
SCFD1-206ENST00000484733 CDC14AQ9UNH5 594 aa10.94□□□□□ -0.66
SCFD1-206ENST00000484733 SLC5A6Q9Y289 635 aa10.94□□□□□ -0.66
SCFD1-206ENST00000484733 RELNP78509 3460 aa10.94□□□□□ -0.66
SCFD1-206ENST00000484733 SPENQ96T58 3664 aaKnown RBP10.94□□□□□ -0.66
SCFD1-206ENST00000484733 LRRK2Q5S007 2527 aa10.94□□□□□ -0.66
SCFD1-206ENST00000484733 LOC105369274A0A096LPK9 316 aa10.93□□□□□ -0.66
SCFD1-206ENST00000484733 LOC102723532A0A0G2JNH3 316 aa10.93□□□□□ -0.66
SCFD1-206ENST00000484733 A0A0J9YVX5 310 aa10.93□□□□□ -0.66
SCFD1-206ENST00000484733 TCRBV7S3A2A0A539 114 aa10.93□□□□□ -0.66
SCFD1-206ENST00000484733 MAGEB16A2A368 324 aa10.93□□□□□ -0.66
SCFD1-206ENST00000484733 ANKUB1A6NFN9 424 aa10.93□□□□□ -0.66
SCFD1-206ENST00000484733 ZNF839A8K0R7 811 aa10.93□□□□□ -0.66
SCFD1-206ENST00000484733 PCDH17O14917 1159 aa10.93□□□□□ -0.66
SCFD1-206ENST00000484733 PRPF4O43172 522 aaKnown RBP eCLIP10.93□□□□□ -0.66
SCFD1-206ENST00000484733 NIPSNAP2O75323 286 aa10.93□□□□□ -0.66
SCFD1-206ENST00000484733 LDLRP01130 860 aa10.93□□□□□ -0.66
SCFD1-206ENST00000484733 PKMP14618 531 aaKnown RBP10.93□□□□□ -0.66
SCFD1-206ENST00000484733 PAMP19021 973 aa10.93□□□□□ -0.66
SCFD1-206ENST00000484733 KCNJ1P48048 391 aa10.93□□□□□ -0.66
SCFD1-206ENST00000484733 OCA2Q04671 838 aa10.93□□□□□ -0.66
SCFD1-206ENST00000484733 FASTKQ14296 549 aaKnown RBP10.93□□□□□ -0.66
SCFD1-206ENST00000484733 ATG9BQ674R7 924 aa10.93□□□□□ -0.66
SCFD1-206ENST00000484733 CNSTQ6PJW8 725 aa10.93□□□□□ -0.66
SCFD1-206ENST00000484733 CES3Q6UWW8 571 aa10.93□□□□□ -0.66
SCFD1-206ENST00000484733 PAQR7Q86WK9 346 aa10.93□□□□□ -0.66
SCFD1-206ENST00000484733 OR4N4Q8N0Y3 316 aa10.93□□□□□ -0.66
SCFD1-206ENST00000484733 OTUD6BQ8N6M0 293 aa10.93□□□□□ -0.66
SCFD1-206ENST00000484733 TRIM58Q8NG06 486 aa10.93□□□□□ -0.66
SCFD1-206ENST00000484733 STT3BQ8TCJ2 826 aa10.93□□□□□ -0.66
SCFD1-206ENST00000484733 PLCD4Q9BRC7 762 aa10.93□□□□□ -0.66
SCFD1-206ENST00000484733 DPH7Q9BTV6 452 aa10.93□□□□□ -0.66
SCFD1-206ENST00000484733 AGPAT4Q9NRZ5 378 aa10.93□□□□□ -0.66
SCFD1-206ENST00000484733 ZNF282Q9UDV7 671 aaPredicted RBP10.93□□□□□ -0.66
SCFD1-206ENST00000484733 NOVA2Q9UNW9 492 aaKnown RBP10.93□□□□□ -0.66
SCFD1-206ENST00000484733 NTNG1Q9Y2I2 539 aa10.93□□□□□ -0.66
SCFD1-206ENST00000484733 USP9YO00507 2555 aaPredicted RBP10.93□□□□□ -0.66
SCFD1-206ENST00000484733 USP9XQ93008 2570 aaPredicted RBP10.93□□□□□ -0.66
SCFD1-206ENST00000484733 NAV2Q8IVL1 2488 aa10.93□□□□□ -0.66
SCFD1-206ENST00000484733 VPS26AO75436 327 aa10.93□□□□□ -0.66
SCFD1-206ENST00000484733 CCNDBP1O95273 360 aa10.93□□□□□ -0.66
SCFD1-206ENST00000484733 ZGLP1P0C6A0 271 aa10.93□□□□□ -0.66
SCFD1-206ENST00000484733 ATXN8OSP0DMR3 200 aa10.93□□□□□ -0.66
SCFD1-206ENST00000484733 MLNP12872 115 aa10.93□□□□□ -0.66
SCFD1-206ENST00000484733 CHRM3P20309 590 aa10.93□□□□□ -0.66
SCFD1-206ENST00000484733 ACSBG2Q5FVE4 666 aa10.93□□□□□ -0.66
SCFD1-206ENST00000484733 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.93□□□□□ -0.66
SCFD1-206ENST00000484733 GARNL3Q5VVW2 1013 aa10.93□□□□□ -0.66
SCFD1-206ENST00000484733 RPUSD3Q6P087 351 aaKnown RBP10.93□□□□□ -0.66
SCFD1-206ENST00000484733 CENPUQ71F23 418 aa10.93□□□□□ -0.66
SCFD1-206ENST00000484733 CILP2Q8IUL8 1156 aa10.93□□□□□ -0.66
SCFD1-206ENST00000484733 PRELID2Q8N945 189 aa10.93□□□□□ -0.66
SCFD1-206ENST00000484733 MCUQ8NE86 351 aa10.93□□□□□ -0.66
SCFD1-206ENST00000484733 MIEF2Q96C03 454 aa10.93□□□□□ -0.66
SCFD1-206ENST00000484733 C10orf90Q96M02 699 aa10.93□□□□□ -0.66
SCFD1-206ENST00000484733 CRB3Q9BUF7 120 aa10.93□□□□□ -0.66
SCFD1-206ENST00000484733 EPS8L2Q9H6S3 715 aa10.93□□□□□ -0.66
SCFD1-206ENST00000484733 GALPQ9UBC7 116 aa10.93□□□□□ -0.66
SCFD1-206ENST00000484733 ZC3H7BQ9UGR2 993 aaKnown RBP10.93□□□□□ -0.66
SCFD1-206ENST00000484733 ERRFI1Q9UJM3 462 aaPredicted RBP10.93□□□□□ -0.66
SCFD1-206ENST00000484733 RUVBL2Q9Y230 463 aaKnown RBP10.93□□□□□ -0.66
SCFD1-206ENST00000484733 FAM237BA0A1B0GVD1 139 aa10.92□□□□□ -0.66
SCFD1-206ENST00000484733 ARHGEF33A8MVX0 844 aa10.92□□□□□ -0.66
SCFD1-206ENST00000484733 H0YGG7 62 aa10.92□□□□□ -0.66
SCFD1-206ENST00000484733 CEP104O60308 925 aa10.92□□□□□ -0.66
SCFD1-206ENST00000484733 CATP04040 527 aaKnown RBP10.92□□□□□ -0.66
SCFD1-206ENST00000484733 CCDC175P0C221 793 aa10.92□□□□□ -0.66
SCFD1-206ENST00000484733 MPC1LP0DKB6 136 aa10.92□□□□□ -0.66
SCFD1-206ENST00000484733 FDXRP22570 491 aa10.92□□□□□ -0.66
SCFD1-206ENST00000484733 RPA3P35244 121 aaPredicted RBP10.92□□□□□ -0.66
SCFD1-206ENST00000484733 ARF3P61204 181 aaPredicted RBP10.92□□□□□ -0.66
SCFD1-206ENST00000484733 PRDX1Q06830 199 aaKnown RBP10.92□□□□□ -0.66
SCFD1-206ENST00000484733 KLC1Q07866 573 aa10.92□□□□□ -0.66
SCFD1-206ENST00000484733 Q0VFX4 171 aa10.92□□□□□ -0.66
SCFD1-206ENST00000484733 MFAP5Q13361 173 aa10.92□□□□□ -0.66
SCFD1-206ENST00000484733 ELOAQ14241 798 aaKnown RBP10.92□□□□□ -0.66
SCFD1-206ENST00000484733 ZNF425Q6IV72 752 aa10.92□□□□□ -0.66
SCFD1-206ENST00000484733 NEPROQ6NW34 567 aa10.92□□□□□ -0.66
SCFD1-206ENST00000484733 MAMDC2Q7Z304 686 aaPredicted RBP10.92□□□□□ -0.66
SCFD1-206ENST00000484733 KCNMB4Q86W47 210 aa10.92□□□□□ -0.66
SCFD1-206ENST00000484733 PARP9Q8IXQ6 854 aa10.92□□□□□ -0.66
SCFD1-206ENST00000484733 DNAJB14Q8TBM8 379 aa10.92□□□□□ -0.66
SCFD1-206ENST00000484733 TRIM56Q9BRZ2 755 aaKnown RBP10.92□□□□□ -0.66
SCFD1-206ENST00000484733 TGIF2Q9GZN2 237 aa10.92□□□□□ -0.66
SCFD1-206ENST00000484733 MRPS30Q9NP92 439 aaKnown RBP10.92□□□□□ -0.66
SCFD1-206ENST00000484733 UTP6Q9NYH9 597 aaKnown RBP10.92□□□□□ -0.66
SCFD1-206ENST00000484733 MAU2Q9Y6X3 613 aa10.92□□□□□ -0.66
SCFD1-206ENST00000484733 DOCK10Q96BY6 2186 aa10.92□□□□□ -0.66
SCFD1-206ENST00000484733 KRT87PA6NCN2 255 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms