RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 TCTE1Q5JU00 501 aa17.21■□□□□ 0.35
ATG4B-221ENST00000483778 PRAMEF13Q5VWM6 474 aa17.21■□□□□ 0.35
ATG4B-221ENST00000483778 TTC27Q6P3X3 843 aa17.21■□□□□ 0.35
ATG4B-221ENST00000483778 TTC23LQ6PF05 361 aa17.21■□□□□ 0.35
ATG4B-221ENST00000483778 IQCKQ8N0W5 287 aa17.21■□□□□ 0.35
ATG4B-221ENST00000483778 GSDMBQ8TAX9 411 aa17.21■□□□□ 0.35
ATG4B-221ENST00000483778 BARD1Q99728 777 aaKnown RBP17.21■□□□□ 0.35
ATG4B-221ENST00000483778 DPH7Q9BTV6 452 aa17.21■□□□□ 0.35
ATG4B-221ENST00000483778 WDR54Q9H977 334 aa17.21■□□□□ 0.35
ATG4B-221ENST00000483778 MRM3Q9HC36 420 aaKnown RBP17.21■□□□□ 0.35
ATG4B-221ENST00000483778 ERRFI1Q9UJM3 462 aaPredicted RBP17.21■□□□□ 0.35
ATG4B-221ENST00000483778 IGKV1-8A0A0C4DH67 115 aa17.2■□□□□ 0.34
ATG4B-221ENST00000483778 KPNA5O15131 536 aa17.2■□□□□ 0.34
ATG4B-221ENST00000483778 SRPX2O60687 465 aaPredicted RBP17.2■□□□□ 0.34
ATG4B-221ENST00000483778 IGHEP01854 428 aa17.2■□□□□ 0.34
ATG4B-221ENST00000483778 TPSB2P20231 275 aa17.2■□□□□ 0.34
ATG4B-221ENST00000483778 TPSAB1Q15661 275 aa17.2■□□□□ 0.34
ATG4B-221ENST00000483778 C4orf22Q6V702 233 aa17.2■□□□□ 0.34
ATG4B-221ENST00000483778 SHISA5Q8N114 240 aa17.2■□□□□ 0.34
ATG4B-221ENST00000483778 AGGF1Q8N302 714 aaeCLIP17.2■□□□□ 0.34
ATG4B-221ENST00000483778 ZADH2Q8N4Q0 377 aa17.2■□□□□ 0.34
ATG4B-221ENST00000483778 OR11G2Q8NGC1 345 aa17.2■□□□□ 0.34
ATG4B-221ENST00000483778 UBE2Q2Q8WVN8 375 aa17.2■□□□□ 0.34
ATG4B-221ENST00000483778 C8orf44Q96CB5 159 aa17.2■□□□□ 0.34
ATG4B-221ENST00000483778 C10orf90Q96M02 699 aa17.2■□□□□ 0.34
ATG4B-221ENST00000483778 ILKAPQ9H0C8 392 aaPredicted RBP17.2■□□□□ 0.34
ATG4B-221ENST00000483778 MED16Q9Y2X0 877 aa17.2■□□□□ 0.34
ATG4B-221ENST00000483778 PCDHGA10Q9Y5H3 936 aa17.2■□□□□ 0.34
ATG4B-221ENST00000483778 COPG1Q9Y678 874 aaKnown RBP17.2■□□□□ 0.34
ATG4B-221ENST00000483778 CROCCQ5TZA2 2017 aa17.2■□□□□ 0.34
ATG4B-221ENST00000483778 OR2A25A4D2G3 310 aa17.19■□□□□ 0.34
ATG4B-221ENST00000483778 H0YGG7 62 aa17.19■□□□□ 0.34
ATG4B-221ENST00000483778 KLHL18O94889 574 aa17.19■□□□□ 0.34
ATG4B-221ENST00000483778 ALPPP05187 535 aa17.19■□□□□ 0.34
ATG4B-221ENST00000483778 PIM1P11309 404 aaPredicted RBP17.19■□□□□ 0.34
ATG4B-221ENST00000483778 CHRM3P20309 590 aa17.19■□□□□ 0.34
ATG4B-221ENST00000483778 ARF3P61204 181 aaPredicted RBP17.19■□□□□ 0.34
ATG4B-221ENST00000483778 KLC1Q07866 573 aa17.19■□□□□ 0.34
ATG4B-221ENST00000483778 GPS1Q13098 491 aa17.19■□□□□ 0.34
ATG4B-221ENST00000483778 PRTGQ2VWP7 1150 aa17.19■□□□□ 0.34
ATG4B-221ENST00000483778 KLHL38Q2WGJ6 581 aa17.19■□□□□ 0.34
ATG4B-221ENST00000483778 FAM214AQ32MH5 1076 aa17.19■□□□□ 0.34
ATG4B-221ENST00000483778 VWA2Q5GFL6 755 aa17.19■□□□□ 0.34
ATG4B-221ENST00000483778 MRNIPQ6NTE8 343 aa17.19■□□□□ 0.34
ATG4B-221ENST00000483778 NEPROQ6NW34 567 aa17.19■□□□□ 0.34
ATG4B-221ENST00000483778 ZNF549Q6P9A3 640 aa17.19■□□□□ 0.34
ATG4B-221ENST00000483778 ZNF662Q6ZS27 426 aa17.19■□□□□ 0.34
ATG4B-221ENST00000483778 RNF44Q7L0R7 432 aa17.19■□□□□ 0.34
ATG4B-221ENST00000483778 SDCCAG8Q86SQ7 713 aaPredicted RBP17.19■□□□□ 0.34
ATG4B-221ENST00000483778 TTC29Q8NA56 475 aaPredicted RBP17.19■□□□□ 0.34
ATG4B-221ENST00000483778 PPFIBP2Q8ND30 876 aa17.19■□□□□ 0.34
ATG4B-221ENST00000483778 OR9A1PQ8NGU1 263 aa17.19■□□□□ 0.34
ATG4B-221ENST00000483778 GIMAP7Q8NHV1 300 aa17.19■□□□□ 0.34
ATG4B-221ENST00000483778 STT3BQ8TCJ2 826 aa17.19■□□□□ 0.34
ATG4B-221ENST00000483778 MS4A14Q96JA4 679 aa17.19■□□□□ 0.34
ATG4B-221ENST00000483778 PKP4Q99569 1192 aa17.19■□□□□ 0.34
ATG4B-221ENST00000483778 RAB11FIP5Q9BXF6 653 aa17.19■□□□□ 0.34
ATG4B-221ENST00000483778 ZNF304Q9HCX3 659 aa17.19■□□□□ 0.34
ATG4B-221ENST00000483778 ZKSCAN5Q9Y2L8 839 aa17.19■□□□□ 0.34
ATG4B-221ENST00000483778 MYO7BQ6PIF6 2116 aa17.18■□□□□ 0.34
ATG4B-221ENST00000483778 WIPF3A6NGB9 483 aa17.18■□□□□ 0.34
ATG4B-221ENST00000483778 PSIP1O75475 530 aaKnown RBP17.18■□□□□ 0.34
ATG4B-221ENST00000483778 FKBP9O95302 570 aa17.18■□□□□ 0.34
ATG4B-221ENST00000483778 CLDN1O95832 211 aa17.18■□□□□ 0.34
ATG4B-221ENST00000483778 ZGLP1P0C6A0 271 aa17.18■□□□□ 0.34
ATG4B-221ENST00000483778 ERGP11308 486 aa17.18■□□□□ 0.34
ATG4B-221ENST00000483778 PKMP14618 531 aaKnown RBP17.18■□□□□ 0.34
ATG4B-221ENST00000483778 CCNFP41002 786 aa17.18■□□□□ 0.34
ATG4B-221ENST00000483778 CLCN7P51798 805 aa17.18■□□□□ 0.34
ATG4B-221ENST00000483778 CDK16Q00536 496 aa17.18■□□□□ 0.34
ATG4B-221ENST00000483778 CTBP1Q13363 440 aa17.18■□□□□ 0.34
ATG4B-221ENST00000483778 RBBP7Q16576 425 aa17.18■□□□□ 0.34
ATG4B-221ENST00000483778 ANKRD20A4Q4UJ75 823 aa17.18■□□□□ 0.34
ATG4B-221ENST00000483778 YOD1Q5VVQ6 348 aaPredicted RBP17.18■□□□□ 0.34
ATG4B-221ENST00000483778 KIAA0930Q6ICG6 404 aaPredicted RBP17.18■□□□□ 0.34
ATG4B-221ENST00000483778 IGFL2Q6UWQ7 119 aa17.18■□□□□ 0.34
ATG4B-221ENST00000483778 CILP2Q8IUL8 1156 aa17.18■□□□□ 0.34
ATG4B-221ENST00000483778 DENND6AQ8IWF6 608 aa17.18■□□□□ 0.34
ATG4B-221ENST00000483778 CATSPER1Q8NEC5 780 aa17.18■□□□□ 0.34
ATG4B-221ENST00000483778 FOPNLQ96NB1 174 aa17.18■□□□□ 0.34
ATG4B-221ENST00000483778 TCF12Q99081 682 aa17.18■□□□□ 0.34
ATG4B-221ENST00000483778 SLC29A3Q9BZD2 475 aa17.18■□□□□ 0.34
ATG4B-221ENST00000483778 GOLGA8MH3BSY2 632 aa17.17■□□□□ 0.34
ATG4B-221ENST00000483778 LDLRP01130 860 aa17.17■□□□□ 0.34
ATG4B-221ENST00000483778 ESR1P03372 595 aa17.17■□□□□ 0.34
ATG4B-221ENST00000483778 MAGEA6P43360 314 aa17.17■□□□□ 0.34
ATG4B-221ENST00000483778 EFNA3P52797 238 aa17.17■□□□□ 0.34
ATG4B-221ENST00000483778 CUL1Q13616 776 aa17.17■□□□□ 0.34
ATG4B-221ENST00000483778 TSTA3Q13630 321 aaPredicted RBP17.17■□□□□ 0.34
ATG4B-221ENST00000483778 HKDC1Q2TB90 917 aa17.17■□□□□ 0.34
ATG4B-221ENST00000483778 TUBB8Q3ZCM7 444 aa17.17■□□□□ 0.34
ATG4B-221ENST00000483778 ATG9BQ674R7 924 aa17.17■□□□□ 0.34
ATG4B-221ENST00000483778 CYHR1Q6ZMK1 362 aa17.17■□□□□ 0.34
ATG4B-221ENST00000483778 PAQR7Q86WK9 346 aa17.17■□□□□ 0.34
ATG4B-221ENST00000483778 LURAP1LQ8IV03 231 aa17.17■□□□□ 0.34
ATG4B-221ENST00000483778 REXO1L1PQ8IX06 675 aa17.17■□□□□ 0.34
ATG4B-221ENST00000483778 CPAMD8Q8IZJ3 1885 aa17.17■□□□□ 0.34
ATG4B-221ENST00000483778 MAIP1Q8WWC4 291 aa17.17■□□□□ 0.34
ATG4B-221ENST00000483778 NACC2Q96BF6 587 aa17.17■□□□□ 0.34
ATG4B-221ENST00000483778 THOC3Q96J01 351 aaKnown RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms